RNA–Protein interactions for RNA: ENSMUST00000169582.2

Usf3-204, Transcript of Gene model 608, (NCBI), mousemouse

APPRIS P2 TSL 5 BASIC

Gene Usf3, Length 12,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3-204ENSMUST00000169582 Rhox8Q6VSS7 320 aa8.41□□□□□ -1.06
Usf3-204ENSMUST00000169582 NischQ80TM9 1593 aa8.35□□□□□ -1.07
Usf3-204ENSMUST00000169582 Rtl1Q7M732 1744 aa8.29□□□□□ -1.08
Usf3-204ENSMUST00000169582 Rpgrip1Q9EPQ2 1331 aa8.11□□□□□ -1.11
Usf3-204ENSMUST00000169582 Ccdc180J3QNE4 1664 aa7.98□□□□□ -1.13
Usf3-204ENSMUST00000169582 Gm35339A0A140LHH9 1649 aa7.96□□□□□ -1.14
Usf3-204ENSMUST00000169582 Abcc9P70170 1546 aa7.93□□□□□ -1.14
Usf3-204ENSMUST00000169582 Trim41Q5NCC3 630 aa7.79□□□□□ -1.16
Usf3-204ENSMUST00000169582 Cngb1E1AZ71 1325 aa7.74□□□□□ -1.17
Usf3-204ENSMUST00000169582 Abcc8B2RUS7 1588 aa7.7□□□□□ -1.18
Usf3-204ENSMUST00000169582 HrcG5E8J6 738 aa7.59□□□□□ -1.19
Usf3-204ENSMUST00000169582 Esf1Q3V1V3 845 aaKnown RBP7.55□□□□□ -1.2
Usf3-204ENSMUST00000169582 Ccdc136Q3TVA9 1136 aa7.47□□□□□ -1.21
Usf3-204ENSMUST00000169582 Dcaf1Q80TR8 1506 aa7.47□□□□□ -1.21
Usf3-204ENSMUST00000169582 Las1lA2BE28 776 aaKnown RBP7.42□□□□□ -1.22
Usf3-204ENSMUST00000169582 NefmP08553 848 aa7.39□□□□□ -1.23
Usf3-204ENSMUST00000169582 Rb1cc1Q9ESK9 1588 aa7.36□□□□□ -1.23
Usf3-204ENSMUST00000169582 Zcchc6Q5BLK4 1491 aaKnown RBP7.34□□□□□ -1.23
Usf3-204ENSMUST00000169582 NacadQ5SWP3 1504 aa7.33□□□□□ -1.24
Usf3-204ENSMUST00000169582 Npm2Q80W85 207 aa7.32□□□□□ -1.24
Usf3-204ENSMUST00000169582 Brd4Q9ESU6 1400 aaKnown RBP7.32□□□□□ -1.24
Usf3-204ENSMUST00000169582 Stra8P70278 393 aa7.3□□□□□ -1.24
Usf3-204ENSMUST00000169582 Pelp1Q9DBD5 1123 aaKnown RBP7.28□□□□□ -1.24
Usf3-204ENSMUST00000169582 Acin1Q9JIX8 1338 aaKnown RBP7.28□□□□□ -1.24
Usf3-204ENSMUST00000169582 Baz1aO88379 1555 aa7.28□□□□□ -1.24
Usf3-204ENSMUST00000169582 Crybg2B7ZCC2 1516 aa7.25□□□□□ -1.25
Usf3-204ENSMUST00000169582 Zeb1Q64318 1117 aa7.25□□□□□ -1.25
Usf3-204ENSMUST00000169582 Cep164Q5DU05 1446 aa7.14□□□□□ -1.27
Usf3-204ENSMUST00000169582 Gab3Q8BSM5 595 aa7.13□□□□□ -1.27
Usf3-204ENSMUST00000169582 Hdac5Q9Z2V6 1113 aa7.13□□□□□ -1.27
Usf3-204ENSMUST00000169582 Ube2uB1AUC4 352 aa7.11□□□□□ -1.27
Usf3-204ENSMUST00000169582 Myt1lP97500 1187 aa7.1□□□□□ -1.27
Usf3-204ENSMUST00000169582 Kdm5dQ62240 1548 aa7.07□□□□□ -1.28
Usf3-204ENSMUST00000169582 Wdr66E9Q743 1299 aa7.07□□□□□ -1.28
Usf3-204ENSMUST00000169582 Neurod1Q60867 357 aa7.04□□□□□ -1.28
Usf3-204ENSMUST00000169582 Anp32bQ9EST5 272 aaKnown RBP7.04□□□□□ -1.28
Usf3-204ENSMUST00000169582 Ccer2J3QPU5 274 aa7.03□□□□□ -1.28
Usf3-204ENSMUST00000169582 Myt1Q8CFC2 1127 aa7.02□□□□□ -1.28
Usf3-204ENSMUST00000169582 Tnnt3Q9QZ47 272 aa7.02□□□□□ -1.29
Usf3-204ENSMUST00000169582 Npm1Q61937 292 aaKnown RBP7.01□□□□□ -1.29
Usf3-204ENSMUST00000169582 Ehmt2Q9Z148 1263 aaKnown RBP6.98□□□□□ -1.29
Usf3-204ENSMUST00000169582 Golga3P55937 1487 aa6.97□□□□□ -1.29
Usf3-204ENSMUST00000169582 NclP09405 707 aaKnown RBP6.97□□□□□ -1.29
Usf3-204ENSMUST00000169582 Smarca2Q6DIC0 1577 aa6.97□□□□□ -1.29
Usf3-204ENSMUST00000169582 UbtfP25976 765 aaKnown RBP6.97□□□□□ -1.29
Usf3-204ENSMUST00000169582 Sycp2Q9CUU3 1500 aa6.96□□□□□ -1.3
Usf3-204ENSMUST00000169582 Ercc6F8VPZ5 1481 aa6.95□□□□□ -1.3
Usf3-204ENSMUST00000169582 Pds5bQ4VA53 1446 aaKnown RBP6.94□□□□□ -1.3
Usf3-204ENSMUST00000169582 CenpbP27790 599 aa6.94□□□□□ -1.3
Usf3-204ENSMUST00000169582 Ccdc18Q640L5 1455 aa6.92□□□□□ -1.3
Usf3-204ENSMUST00000169582 Cdk11bP24788 784 aaKnown RBP6.92□□□□□ -1.3
Usf3-204ENSMUST00000169582 ScribQ80U72 1612 aa6.92□□□□□ -1.3
Usf3-204ENSMUST00000169582 Cttnbp2B9EJA2 1648 aa6.91□□□□□ -1.3
Usf3-204ENSMUST00000169582 Rsf1E9PWW9 1441 aaKnown RBP6.91□□□□□ -1.3
Usf3-204ENSMUST00000169582 Il27Q8K3I6 234 aa6.9□□□□□ -1.3
Usf3-204ENSMUST00000169582 TonslQ6NZL6 1363 aa6.9□□□□□ -1.31
Usf3-204ENSMUST00000169582 Rtl5Q5DTT4 599 aa6.88□□□□□ -1.31
Usf3-204ENSMUST00000169582 Fmn1Q05860 1466 aa6.87□□□□□ -1.31
Usf3-204ENSMUST00000169582 NrdcQ8BHG1 1161 aa6.85□□□□□ -1.31
Usf3-204ENSMUST00000169582 Clip1Q922J3 1391 aa6.84□□□□□ -1.31
Usf3-204ENSMUST00000169582 Smarca4Q3TKT4 1613 aaKnown RBP6.83□□□□□ -1.32
Usf3-204ENSMUST00000169582 Fam50aQ9WV03 339 aaKnown RBP6.82□□□□□ -1.32
Usf3-204ENSMUST00000169582 ClspnQ80YR7 1315 aa6.82□□□□□ -1.32
Usf3-204ENSMUST00000169582 Clstn2Q9ER65 966 aa6.82□□□□□ -1.32
Usf3-204ENSMUST00000169582 NeflP08551 543 aa6.81□□□□□ -1.32
Usf3-204ENSMUST00000169582 Eea1Q8BL66 1411 aa6.81□□□□□ -1.32
Usf3-204ENSMUST00000169582 Nop58Q6DFW4 536 aaKnown RBP6.79□□□□□ -1.32
Usf3-204ENSMUST00000169582 Ubl4bQ9CQ84 188 aa6.79□□□□□ -1.32
Usf3-204ENSMUST00000169582 Pcgf6Q99NA9 353 aa6.78□□□□□ -1.32
Usf3-204ENSMUST00000169582 Atad2bE9Q166 1460 aaKnown RBP6.78□□□□□ -1.32
Usf3-204ENSMUST00000169582 Polr1aO35134 1717 aaKnown RBP6.77□□□□□ -1.33
Usf3-204ENSMUST00000169582 Mia2Q91ZV0 1396 aa6.76□□□□□ -1.33
Usf3-204ENSMUST00000169582 Mier1Q5UAK0 511 aa6.76□□□□□ -1.33
Usf3-204ENSMUST00000169582 Baz1bQ9Z277 1479 aa6.76□□□□□ -1.33
Usf3-204ENSMUST00000169582 CftrP26361 1476 aa6.75□□□□□ -1.33
Usf3-204ENSMUST00000169582 Kif15Q6P9L6 1387 aa6.75□□□□□ -1.33
Usf3-204ENSMUST00000169582 Upf2A2AT37 1269 aaKnown RBP6.73□□□□□ -1.33
Usf3-204ENSMUST00000169582 Setd5Q5XJV7 1441 aa6.72□□□□□ -1.33
Usf3-204ENSMUST00000169582 Eif5bQ05D44 1216 aaKnown RBP6.72□□□□□ -1.33
Usf3-204ENSMUST00000169582 Arid4bA2CG63 1314 aaKnown RBP6.71□□□□□ -1.33
Usf3-204ENSMUST00000169582 Rpap1Q80TE0 1409 aa6.71□□□□□ -1.34
Usf3-204ENSMUST00000169582 BlmO88700 1416 aa6.69□□□□□ -1.34
Usf3-204ENSMUST00000169582 Synj1Q8CHC4 1574 aa6.69□□□□□ -1.34
Usf3-204ENSMUST00000169582 Chic1Q8CBW7 227 aa6.68□□□□□ -1.34
Usf3-204ENSMUST00000169582 Phldb1Q6PDH0 1371 aaKnown RBP6.68□□□□□ -1.34
Usf3-204ENSMUST00000169582 Zfp777B9EKF4 885 aa6.68□□□□□ -1.34
Usf3-204ENSMUST00000169582 Iqgap2Q3UQ44 1575 aa6.67□□□□□ -1.34
Usf3-204ENSMUST00000169582 Ap3b1Q9Z1T1 1105 aa6.66□□□□□ -1.34
Usf3-204ENSMUST00000169582 Os9Q8K2C7 672 aa6.66□□□□□ -1.34
Usf3-204ENSMUST00000169582 Cwc22Q8C5N3 908 aaKnown RBP6.65□□□□□ -1.35
Usf3-204ENSMUST00000169582 Fyco1Q8VDC1 1437 aa6.64□□□□□ -1.35
Usf3-204ENSMUST00000169582 Supt5hO55201 1082 aaKnown RBP6.64□□□□□ -1.35
Usf3-204ENSMUST00000169582 Cep162Q6ZQ06 1403 aa6.64□□□□□ -1.35
Usf3-204ENSMUST00000169582 Dhx57Q6P5D3 1388 aaKnown RBP6.64□□□□□ -1.35
Usf3-204ENSMUST00000169582 Plekhg3Q4VAC9 1341 aa6.64□□□□□ -1.35
Usf3-204ENSMUST00000169582 CntlnA2AM05 1397 aa6.63□□□□□ -1.35
Usf3-204ENSMUST00000169582 Cux1P53564 1515 aa6.62□□□□□ -1.35
Usf3-204ENSMUST00000169582 Rsph4aQ8BYM7 716 aa6.62□□□□□ -1.35
Usf3-204ENSMUST00000169582 Top2bQ64511 1612 aa6.6□□□□□ -1.35
Usf3-204ENSMUST00000169582 Map3k1P53349 1493 aa6.6□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms