RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Chic1Q8CBW7 227 aa29.91■■■□□ 2.38
Pdlim5-204ENSMUST00000168967 Mapk8ip2Q9ERE9 830 aa28.78■■■□□ 2.2
Pdlim5-204ENSMUST00000168967 Phf23Q8BSN5 401 aa26.99■■□□□ 1.91
Pdlim5-204ENSMUST00000168967 Plppr3Q7TPB0 716 aa26.27■■□□□ 1.8
Pdlim5-204ENSMUST00000168967 Gab3Q8BSM5 595 aa25.89■■□□□ 1.73
Pdlim5-204ENSMUST00000168967 Senp3Q9EP97 568 aaKnown RBP24.86■■□□□ 1.57
Pdlim5-204ENSMUST00000168967 Kcna4Q61423 654 aa24.29■■□□□ 1.48
Pdlim5-204ENSMUST00000168967 Trap1aP19473 224 aa21.89■■□□□ 1.09
Pdlim5-204ENSMUST00000168967 Hoxd11P23813 323 aa21.79■■□□□ 1.08
Pdlim5-204ENSMUST00000168967 Dmrt2Q8BG36 561 aa21.71■■□□□ 1.07
Pdlim5-204ENSMUST00000168967 Ppargc1bQ8VHJ7 1014 aa21.59■■□□□ 1.05
Pdlim5-204ENSMUST00000168967 Fam163aQ8CAA5 168 aa21.15■□□□□ 0.98
Pdlim5-204ENSMUST00000168967 Slc4a1apE9PX68 744 aa20.94■□□□□ 0.94
Pdlim5-204ENSMUST00000168967 Znf219Q6IQX8 726 aa20.82■□□□□ 0.92
Pdlim5-204ENSMUST00000168967 Chrna2Q91X60 512 aa20.68■□□□□ 0.9
Pdlim5-204ENSMUST00000168967 Atf5O70191 283 aa20.52■□□□□ 0.88
Pdlim5-204ENSMUST00000168967 Rsph4aQ8BYM7 716 aa20.47■□□□□ 0.87
Pdlim5-204ENSMUST00000168967 Dnajc5bQ9CQ94 199 aa20.44■□□□□ 0.86
Pdlim5-204ENSMUST00000168967 Ppp4r2Q0VGB7 417 aa20.23■□□□□ 0.83
Pdlim5-204ENSMUST00000168967 Rimbp2Q80U40 1072 aa20.23■□□□□ 0.83
Pdlim5-204ENSMUST00000168967 Hs6st3Q9QYK4 470 aa20.23■□□□□ 0.83
Pdlim5-204ENSMUST00000168967 1700123L14RikQ3V2K7 440 aa19.86■□□□□ 0.77
Pdlim5-204ENSMUST00000168967 Ube2uB1AUC4 352 aa19.75■□□□□ 0.75
Pdlim5-204ENSMUST00000168967 Akt1s1Q9D1F4 257 aa19.68■□□□□ 0.74
Pdlim5-204ENSMUST00000168967 ArsiQ32KI9 573 aa19.6■□□□□ 0.73
Pdlim5-204ENSMUST00000168967 Fam71e1A1L3C1 212 aa19.54■□□□□ 0.72
Pdlim5-204ENSMUST00000168967 Slc34a2Q9DBP0 697 aa19.44■□□□□ 0.7
Pdlim5-204ENSMUST00000168967 Bach1P97302 739 aa19.39■□□□□ 0.7
Pdlim5-204ENSMUST00000168967 Nlrp6Q91WS2 869 aa19.18■□□□□ 0.66
Pdlim5-204ENSMUST00000168967 Cdca7Q9D0M2 382 aa19.14■□□□□ 0.65
Pdlim5-204ENSMUST00000168967 Sox12Q04890 314 aa19.09■□□□□ 0.65
Pdlim5-204ENSMUST00000168967 WdpcpQ8C456 722 aa18.92■□□□□ 0.62
Pdlim5-204ENSMUST00000168967 AcrbpQ3V140 540 aa18.91■□□□□ 0.62
Pdlim5-204ENSMUST00000168967 Pde4cQ3UEI1 686 aa18.89■□□□□ 0.61
Pdlim5-204ENSMUST00000168967 C1qtnf12Q8R2Z0 308 aa18.88■□□□□ 0.61
Pdlim5-204ENSMUST00000168967 Riok3Q9DBU3 519 aaKnown RBP18.56■□□□□ 0.56
Pdlim5-204ENSMUST00000168967 NischQ80TM9 1593 aa18.51■□□□□ 0.55
Pdlim5-204ENSMUST00000168967 Npm2Q80W85 207 aa18.5■□□□□ 0.55
Pdlim5-204ENSMUST00000168967 Rtn4Q99P72 1162 aaKnown RBP18.47■□□□□ 0.55
Pdlim5-204ENSMUST00000168967 Prm3Q62100 101 aa18.46■□□□□ 0.55
Pdlim5-204ENSMUST00000168967 MyclP10166 368 aa18.4■□□□□ 0.54
Pdlim5-204ENSMUST00000168967 Tshz2Q68FE9 1030 aa18.35■□□□□ 0.53
Pdlim5-204ENSMUST00000168967 Ms4a5Q810P8 197 aa18.35■□□□□ 0.53
Pdlim5-204ENSMUST00000168967 Trim41Q5NCC3 630 aa18.25■□□□□ 0.51
Pdlim5-204ENSMUST00000168967 G430095P16RikE9Q913 147 aa18.22■□□□□ 0.51
Pdlim5-204ENSMUST00000168967 Styxl1Q9DAR2 321 aa18.17■□□□□ 0.5
Pdlim5-204ENSMUST00000168967 Ifnlr1Q8CGK5 535 aa18.17■□□□□ 0.5
Pdlim5-204ENSMUST00000168967 Gm35339A0A140LHH9 1649 aa18.14■□□□□ 0.49
Pdlim5-204ENSMUST00000168967 Ehmt2Q9Z148 1263 aaKnown RBP18.12■□□□□ 0.49
Pdlim5-204ENSMUST00000168967 Zbtb7aO88939 569 aaKnown RBP18.07■□□□□ 0.48
Pdlim5-204ENSMUST00000168967 Abcc9P70170 1546 aa18.06■□□□□ 0.48
Pdlim5-204ENSMUST00000168967 Egfem1Q8C088 590 aa18.04■□□□□ 0.48
Pdlim5-204ENSMUST00000168967 Rtl1Q7M732 1744 aa17.92■□□□□ 0.46
Pdlim5-204ENSMUST00000168967 Grwd1Q810D6 446 aaKnown RBP17.89■□□□□ 0.45
Pdlim5-204ENSMUST00000168967 Zbtb12Q9Z150 459 aa17.84■□□□□ 0.45
Pdlim5-204ENSMUST00000168967 Rnf216P58283 853 aa17.7■□□□□ 0.42
Pdlim5-204ENSMUST00000168967 Abcb7Q61102 752 aaKnown RBP17.69■□□□□ 0.42
Pdlim5-204ENSMUST00000168967 Gtpbp6Q3U6U5 514 aa17.67■□□□□ 0.42
Pdlim5-204ENSMUST00000168967 Znf704Q9ERQ3 566 aa17.65■□□□□ 0.42
Pdlim5-204ENSMUST00000168967 Ccdc180J3QNE4 1664 aa17.61■□□□□ 0.41
Pdlim5-204ENSMUST00000168967 Slc4a5E9Q3M5 1116 aa17.57■□□□□ 0.4
Pdlim5-204ENSMUST00000168967 Ecm2Q5FW85 670 aa17.56■□□□□ 0.4
Pdlim5-204ENSMUST00000168967 Fbln2P37889 1221 aa17.54■□□□□ 0.4
Pdlim5-204ENSMUST00000168967 Rpgrip1Q9EPQ2 1331 aa17.54■□□□□ 0.4
Pdlim5-204ENSMUST00000168967 Abcc8B2RUS7 1588 aa17.49■□□□□ 0.39
Pdlim5-204ENSMUST00000168967 MpndQ3TV65 487 aa17.48■□□□□ 0.39
Pdlim5-204ENSMUST00000168967 Npm3Q9CPP0 175 aaKnown RBP17.48■□□□□ 0.39
Pdlim5-204ENSMUST00000168967 Tcf3P15806 651 aa17.44■□□□□ 0.38
Pdlim5-204ENSMUST00000168967 Nkx1-1G3UXB3 402 aa17.42■□□□□ 0.38
Pdlim5-204ENSMUST00000168967 Rhox8Q6VSS7 320 aa17.35■□□□□ 0.37
Pdlim5-204ENSMUST00000168967 Prdm10Q3UTQ7 1184 aa17.29■□□□□ 0.36
Pdlim5-204ENSMUST00000168967 Ppp1r37Q8BKR5 712 aa17.23■□□□□ 0.35
Pdlim5-204ENSMUST00000168967 Skida1Q80YR3 822 aa17.17■□□□□ 0.34
Pdlim5-204ENSMUST00000168967 Zcchc6Q5BLK4 1491 aaKnown RBP16.95■□□□□ 0.3
Pdlim5-204ENSMUST00000168967 Lrrc43Q3V0L5 667 aa16.87■□□□□ 0.29
Pdlim5-204ENSMUST00000168967 Acin1Q9JIX8 1338 aaKnown RBP16.86■□□□□ 0.29
Pdlim5-204ENSMUST00000168967 Jarid2Q62315 1234 aa16.77■□□□□ 0.28
Pdlim5-204ENSMUST00000168967 HrcG5E8J6 738 aa16.69■□□□□ 0.26
Pdlim5-204ENSMUST00000168967 Pitpnm1O35954 1243 aa16.68■□□□□ 0.26
Pdlim5-204ENSMUST00000168967 Dcaf1Q80TR8 1506 aa16.67■□□□□ 0.26
Pdlim5-204ENSMUST00000168967 ScribQ80U72 1612 aa16.65■□□□□ 0.26
Pdlim5-204ENSMUST00000168967 Ppp6r1Q7TSI3 856 aa16.58■□□□□ 0.24
Pdlim5-204ENSMUST00000168967 CatipB9EKE5 520 aa16.57■□□□□ 0.24
Pdlim5-204ENSMUST00000168967 Trim35Q8C006 501 aa16.56■□□□□ 0.24
Pdlim5-204ENSMUST00000168967 MycnP03966 462 aaKnown RBP16.54■□□□□ 0.24
Pdlim5-204ENSMUST00000168967 Spock2Q9ER58 423 aa16.51■□□□□ 0.23
Pdlim5-204ENSMUST00000168967 Cadps2Q8BYR5 1297 aa16.51■□□□□ 0.23
Pdlim5-204ENSMUST00000168967 Kcnn1Q9EQR3 537 aa16.45■□□□□ 0.22
Pdlim5-204ENSMUST00000168967 Sra1Q80VJ2 232 aa16.43■□□□□ 0.22
Pdlim5-204ENSMUST00000168967 Nyap1Q6PFX7 833 aa16.41■□□□□ 0.22
Pdlim5-204ENSMUST00000168967 Ildr2B5TVM2 661 aa16.37■□□□□ 0.21
Pdlim5-204ENSMUST00000168967 Hnrnpul2Q00PI9 745 aaKnown RBP16.36■□□□□ 0.21
Pdlim5-204ENSMUST00000168967 Znf703P0CL69 594 aa16.35■□□□□ 0.21
Pdlim5-204ENSMUST00000168967 Prr29B1ARI9 187 aa16.34■□□□□ 0.21
Pdlim5-204ENSMUST00000168967 Kank3Q9Z1P7 791 aa16.34■□□□□ 0.21
Pdlim5-204ENSMUST00000168967 Repin1Q5U4E2 545 aa16.33■□□□□ 0.2
Pdlim5-204ENSMUST00000168967 GapdhsQ64467 440 aa16.33■□□□□ 0.2
Pdlim5-204ENSMUST00000168967 Fam117bQ3U3E2 584 aa16.31■□□□□ 0.2
Pdlim5-204ENSMUST00000168967 Pcgf6Q99NA9 353 aa16.3■□□□□ 0.2
Pdlim5-204ENSMUST00000168967 Pde4dQ01063 747 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms