RNA–Protein interactions for RNA: ENSMUST00000167327.1

Actn1-202, Transcript of Alpha-actinin-1, mousemouse

TSL 1 (best) BASIC

Gene Actn1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actn1-202ENSMUST00000167327 NischQ80TM9 1593 aa19.26■□□□□ 0.67
Actn1-202ENSMUST00000167327 Gm35339A0A140LHH9 1649 aa19.01■□□□□ 0.63
Actn1-202ENSMUST00000167327 Abcc9P70170 1546 aa18.72■□□□□ 0.59
Actn1-202ENSMUST00000167327 Abcc8B2RUS7 1588 aa18.32■□□□□ 0.52
Actn1-202ENSMUST00000167327 Rhox8Q6VSS7 320 aa17.71■□□□□ 0.43
Actn1-202ENSMUST00000167327 Rtl1Q7M732 1744 aa17.45■□□□□ 0.38
Actn1-202ENSMUST00000167327 ScribQ80U72 1612 aa17.13■□□□□ 0.33
Actn1-202ENSMUST00000167327 Ccdc180J3QNE4 1664 aa17.08■□□□□ 0.33
Actn1-202ENSMUST00000167327 Dcaf1Q80TR8 1506 aa17.08■□□□□ 0.33
Actn1-202ENSMUST00000167327 Rb1cc1Q9ESK9 1588 aa16.89■□□□□ 0.29
Actn1-202ENSMUST00000167327 Zcchc6Q5BLK4 1491 aaKnown RBP16.83■□□□□ 0.28
Actn1-202ENSMUST00000167327 Kdm5dQ62240 1548 aa16.8■□□□□ 0.28
Actn1-202ENSMUST00000167327 Baz1aO88379 1555 aa16.69■□□□□ 0.26
Actn1-202ENSMUST00000167327 NacadQ5SWP3 1504 aa16.67■□□□□ 0.26
Actn1-202ENSMUST00000167327 Rpgrip1Q9EPQ2 1331 aa16.53■□□□□ 0.24
Actn1-202ENSMUST00000167327 Ccdc136Q3TVA9 1136 aa16.42■□□□□ 0.22
Actn1-202ENSMUST00000167327 Crybg2B7ZCC2 1516 aa16.37■□□□□ 0.21
Actn1-202ENSMUST00000167327 Sycp2Q9CUU3 1500 aa16.31■□□□□ 0.2
Actn1-202ENSMUST00000167327 Smarca2Q6DIC0 1577 aa16.3■□□□□ 0.2
Actn1-202ENSMUST00000167327 HrcG5E8J6 738 aa16.24■□□□□ 0.19
Actn1-202ENSMUST00000167327 Trim41Q5NCC3 630 aa16.1■□□□□ 0.17
Actn1-202ENSMUST00000167327 Pcgf6Q99NA9 353 aa16.06■□□□□ 0.16
Actn1-202ENSMUST00000167327 BicraF8VPZ9 1578 aa15.95■□□□□ 0.14
Actn1-202ENSMUST00000167327 Brd4Q9ESU6 1400 aaKnown RBP15.9■□□□□ 0.14
Actn1-202ENSMUST00000167327 Cecr2E9Q2Z1 1453 aa15.9■□□□□ 0.14
Actn1-202ENSMUST00000167327 Acin1Q9JIX8 1338 aaKnown RBP15.89■□□□□ 0.13
Actn1-202ENSMUST00000167327 Cep164Q5DU05 1446 aa15.84■□□□□ 0.13
Actn1-202ENSMUST00000167327 Synj1Q8CHC4 1574 aa15.78■□□□□ 0.12
Actn1-202ENSMUST00000167327 Cngb1E1AZ71 1325 aa15.74■□□□□ 0.11
Actn1-202ENSMUST00000167327 Ehmt2Q9Z148 1263 aaKnown RBP15.72■□□□□ 0.11
Actn1-202ENSMUST00000167327 Golga3P55937 1487 aa15.7■□□□□ 0.1
Actn1-202ENSMUST00000167327 CftrP26361 1476 aa15.68■□□□□ 0.1
Actn1-202ENSMUST00000167327 Rsf1E9PWW9 1441 aaKnown RBP15.67■□□□□ 0.1
Actn1-202ENSMUST00000167327 Cttnbp2B9EJA2 1648 aa15.63■□□□□ 0.09
Actn1-202ENSMUST00000167327 Chic1Q8CBW7 227 aa15.61■□□□□ 0.09
Actn1-202ENSMUST00000167327 Smarca4Q3TKT4 1613 aaKnown RBP15.6■□□□□ 0.09
Actn1-202ENSMUST00000167327 Ccdc88bQ4QRL3 1481 aa15.58■□□□□ 0.08
Actn1-202ENSMUST00000167327 Esf1Q3V1V3 845 aaKnown RBP15.55■□□□□ 0.08
Actn1-202ENSMUST00000167327 Neurod1Q60867 357 aa15.54■□□□□ 0.08
Actn1-202ENSMUST00000167327 Top2bQ64511 1612 aa15.54■□□□□ 0.08
Actn1-202ENSMUST00000167327 Gab3Q8BSM5 595 aa15.48■□□□□ 0.07
Actn1-202ENSMUST00000167327 Las1lA2BE28 776 aaKnown RBP15.43■□□□□ 0.06
Actn1-202ENSMUST00000167327 DiexfQ8BTT6 772 aaKnown RBP15.43■□□□□ 0.06
Actn1-202ENSMUST00000167327 Cc2d2aQ8CFW7 1633 aa15.4■□□□□ 0.06
Actn1-202ENSMUST00000167327 Iqgap2Q3UQ44 1575 aa15.4■□□□□ 0.06
Actn1-202ENSMUST00000167327 Supt5hO55201 1082 aaKnown RBP15.39■□□□□ 0.05
Actn1-202ENSMUST00000167327 CenpbP27790 599 aa15.36■□□□□ 0.05
Actn1-202ENSMUST00000167327 Atad2bE9Q166 1460 aaKnown RBP15.33■□□□□ 0.04
Actn1-202ENSMUST00000167327 1700123L14RikQ3V2K7 440 aa15.32■□□□□ 0.04
Actn1-202ENSMUST00000167327 Fmn1Q05860 1466 aa15.31■□□□□ 0.04
Actn1-202ENSMUST00000167327 Myt1Q8CFC2 1127 aa15.3■□□□□ 0.04
Actn1-202ENSMUST00000167327 Pds5bQ4VA53 1446 aaKnown RBP15.27■□□□□ 0.03
Actn1-202ENSMUST00000167327 Top2aQ01320 1528 aaKnown RBP15.23■□□□□ 0.03
Actn1-202ENSMUST00000167327 Rapgef2Q8CHG7 1496 aa15.18■□□□□ 0.02
Actn1-202ENSMUST00000167327 Bcl11aQ9QYE3 773 aa15.15■□□□□ 0.02
Actn1-202ENSMUST00000167327 Wdr62Q3U3T8 1523 aa15.1■□□□□ 0.01
Actn1-202ENSMUST00000167327 TnnQ80Z71 1560 aa15.09■□□□□ 0.01
Actn1-202ENSMUST00000167327 Frmpd1A2AKB4 1549 aa15.09■□□□□ 0.01
Actn1-202ENSMUST00000167327 Csrnp3P59055 597 aa15.07■□□□□ 0
Actn1-202ENSMUST00000167327 Cep162Q6ZQ06 1403 aa15.05■□□□□ 0
Actn1-202ENSMUST00000167327 Ercc6F8VPZ5 1481 aa15.02■□□□□ -0
Actn1-202ENSMUST00000167327 Npm2Q80W85 207 aa14.98□□□□□ -0.01
Actn1-202ENSMUST00000167327 Lamc3Q9R0B6 1581 aa14.97□□□□□ -0.01
Actn1-202ENSMUST00000167327 Myt1lP97500 1187 aa14.96□□□□□ -0.02
Actn1-202ENSMUST00000167327 Mier1Q5UAK0 511 aa14.96□□□□□ -0.02
Actn1-202ENSMUST00000167327 Eif4g1Q6NZJ6 1600 aaKnown RBP14.95□□□□□ -0.02
Actn1-202ENSMUST00000167327 Unc13aQ4KUS2 1712 aa14.93□□□□□ -0.02
Actn1-202ENSMUST00000167327 Kif15Q6P9L6 1387 aa14.91□□□□□ -0.02
Actn1-202ENSMUST00000167327 NefmP08553 848 aa14.89□□□□□ -0.03
Actn1-202ENSMUST00000167327 Anks4bQ8K3X6 423 aa14.86□□□□□ -0.03
Actn1-202ENSMUST00000167327 PrkcshO08795 521 aa14.86□□□□□ -0.03
Actn1-202ENSMUST00000167327 Camsap1A2AHC3 1581 aa14.85□□□□□ -0.03
Actn1-202ENSMUST00000167327 UbtfP25976 765 aaKnown RBP14.84□□□□□ -0.03
Actn1-202ENSMUST00000167327 PtprkP35822 1457 aa14.84□□□□□ -0.03
Actn1-202ENSMUST00000167327 NrkQ9R0G8 1455 aa14.84□□□□□ -0.03
Actn1-202ENSMUST00000167327 Arhgap35Q91YM2 1499 aa14.83□□□□□ -0.04
Actn1-202ENSMUST00000167327 Il27Q8K3I6 234 aa14.82□□□□□ -0.04
Actn1-202ENSMUST00000167327 Clip1Q922J3 1391 aa14.8□□□□□ -0.04
Actn1-202ENSMUST00000167327 Shroom4Q1W617 1475 aa14.8□□□□□ -0.04
Actn1-202ENSMUST00000167327 Thoc2B1AZI6 1594 aaKnown RBP14.79□□□□□ -0.04
Actn1-202ENSMUST00000167327 Aplp2Q06335 707 aa14.79□□□□□ -0.04
Actn1-202ENSMUST00000167327 Ccdc18Q640L5 1455 aa14.78□□□□□ -0.04
Actn1-202ENSMUST00000167327 Phldb1Q6PDH0 1371 aaKnown RBP14.75□□□□□ -0.05
Actn1-202ENSMUST00000167327 Zeb1Q64318 1117 aa14.74□□□□□ -0.05
Actn1-202ENSMUST00000167327 Grin2bQ01097 1482 aa14.73□□□□□ -0.05
Actn1-202ENSMUST00000167327 Map3k1P53349 1493 aa14.73□□□□□ -0.05
Actn1-202ENSMUST00000167327 Plekhg3Q4VAC9 1341 aa14.69□□□□□ -0.06
Actn1-202ENSMUST00000167327 Eea1Q8BL66 1411 aa14.68□□□□□ -0.06
Actn1-202ENSMUST00000167327 Gm38655A0A286YDK6 273 aa14.68□□□□□ -0.06
Actn1-202ENSMUST00000167327 Cux2P70298 1426 aa14.67□□□□□ -0.06
Actn1-202ENSMUST00000167327 Arap1Q4LDD4 1452 aa14.66□□□□□ -0.06
Actn1-202ENSMUST00000167327 Fam135aQ6NS59 1506 aa14.64□□□□□ -0.07
Actn1-202ENSMUST00000167327 Mroh2bQ7M6Y6 1581 aa14.64□□□□□ -0.07
Actn1-202ENSMUST00000167327 Ubl4bQ9CQ84 188 aa14.63□□□□□ -0.07
Actn1-202ENSMUST00000167327 Baz1bQ9Z277 1479 aa14.62□□□□□ -0.07
Actn1-202ENSMUST00000167327 Setd5Q5XJV7 1441 aa14.61□□□□□ -0.07
Actn1-202ENSMUST00000167327 Amer1Q7TS75 1132 aa14.61□□□□□ -0.07
Actn1-202ENSMUST00000167327 Sall2Q9QX96 1004 aa14.61□□□□□ -0.07
Actn1-202ENSMUST00000167327 Arhgef5E9Q7D5 1581 aa14.61□□□□□ -0.07
Actn1-202ENSMUST00000167327 Npm1Q61937 292 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms