RNA–Protein interactions for RNA: ENSMUST00000164242.8

Cchcr1-202, Transcript of Coiled-coil alpha-helical rod protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Cchcr1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1-202ENSMUST00000164242 NischQ80TM9 1593 aa27■■□□□ 1.91
Cchcr1-202ENSMUST00000164242 Gm35339A0A140LHH9 1649 aa26.57■■□□□ 1.84
Cchcr1-202ENSMUST00000164242 Abcc9P70170 1546 aa26.22■■□□□ 1.79
Cchcr1-202ENSMUST00000164242 Abcc8B2RUS7 1588 aa25.61■■□□□ 1.69
Cchcr1-202ENSMUST00000164242 Rhox8Q6VSS7 320 aa25.11■■□□□ 1.61
Cchcr1-202ENSMUST00000164242 Rtl1Q7M732 1744 aa24.83■■□□□ 1.56
Cchcr1-202ENSMUST00000164242 Rpgrip1Q9EPQ2 1331 aa24.46■■□□□ 1.51
Cchcr1-202ENSMUST00000164242 Ccdc180J3QNE4 1664 aa24.38■■□□□ 1.49
Cchcr1-202ENSMUST00000164242 ScribQ80U72 1612 aa23.94■■□□□ 1.42
Cchcr1-202ENSMUST00000164242 Dcaf1Q80TR8 1506 aa23.91■■□□□ 1.42
Cchcr1-202ENSMUST00000164242 Zcchc6Q5BLK4 1491 aaKnown RBP23.9■■□□□ 1.42
Cchcr1-202ENSMUST00000164242 Rb1cc1Q9ESK9 1588 aa23.68■■□□□ 1.38
Cchcr1-202ENSMUST00000164242 Acin1Q9JIX8 1338 aaKnown RBP23.61■■□□□ 1.37
Cchcr1-202ENSMUST00000164242 Pcgf6Q99NA9 353 aa23.56■■□□□ 1.36
Cchcr1-202ENSMUST00000164242 Kdm5dQ62240 1548 aa23.42■■□□□ 1.34
Cchcr1-202ENSMUST00000164242 Baz1aO88379 1555 aa23.39■■□□□ 1.34
Cchcr1-202ENSMUST00000164242 Ccdc136Q3TVA9 1136 aa23.28■■□□□ 1.32
Cchcr1-202ENSMUST00000164242 NacadQ5SWP3 1504 aa23.26■■□□□ 1.31
Cchcr1-202ENSMUST00000164242 HrcG5E8J6 738 aa23.21■■□□□ 1.31
Cchcr1-202ENSMUST00000164242 Crybg2B7ZCC2 1516 aa22.93■■□□□ 1.26
Cchcr1-202ENSMUST00000164242 Ehmt2Q9Z148 1263 aaKnown RBP22.88■■□□□ 1.25
Cchcr1-202ENSMUST00000164242 Smarca2Q6DIC0 1577 aa22.87■■□□□ 1.25
Cchcr1-202ENSMUST00000164242 Neurod1Q60867 357 aa22.86■■□□□ 1.25
Cchcr1-202ENSMUST00000164242 Trim41Q5NCC3 630 aa22.78■■□□□ 1.24
Cchcr1-202ENSMUST00000164242 Sycp2Q9CUU3 1500 aa22.77■■□□□ 1.24
Cchcr1-202ENSMUST00000164242 Supt5hO55201 1082 aaKnown RBP22.75■■□□□ 1.23
Cchcr1-202ENSMUST00000164242 Las1lA2BE28 776 aaKnown RBP22.56■■□□□ 1.2
Cchcr1-202ENSMUST00000164242 Cep164Q5DU05 1446 aa22.53■■□□□ 1.2
Cchcr1-202ENSMUST00000164242 1700123L14RikQ3V2K7 440 aa22.47■■□□□ 1.19
Cchcr1-202ENSMUST00000164242 Brd4Q9ESU6 1400 aaKnown RBP22.34■■□□□ 1.17
Cchcr1-202ENSMUST00000164242 CenpbP27790 599 aa22.33■■□□□ 1.16
Cchcr1-202ENSMUST00000164242 Myt1Q8CFC2 1127 aa22.32■■□□□ 1.16
Cchcr1-202ENSMUST00000164242 BicraF8VPZ9 1578 aa22.31■■□□□ 1.16
Cchcr1-202ENSMUST00000164242 Cecr2E9Q2Z1 1453 aa22.29■■□□□ 1.16
Cchcr1-202ENSMUST00000164242 Cngb1E1AZ71 1325 aa22.26■■□□□ 1.15
Cchcr1-202ENSMUST00000164242 Rsf1E9PWW9 1441 aaKnown RBP22.21■■□□□ 1.15
Cchcr1-202ENSMUST00000164242 DiexfQ8BTT6 772 aaKnown RBP22.18■■□□□ 1.14
Cchcr1-202ENSMUST00000164242 Chic1Q8CBW7 227 aa22.17■■□□□ 1.14
Cchcr1-202ENSMUST00000164242 Synj1Q8CHC4 1574 aa22.14■■□□□ 1.14
Cchcr1-202ENSMUST00000164242 Golga3P55937 1487 aa22.13■■□□□ 1.13
Cchcr1-202ENSMUST00000164242 Csrnp3P59055 597 aa22.13■■□□□ 1.13
Cchcr1-202ENSMUST00000164242 Ccdc88bQ4QRL3 1481 aa22.05■■□□□ 1.12
Cchcr1-202ENSMUST00000164242 Gab3Q8BSM5 595 aa22.03■■□□□ 1.12
Cchcr1-202ENSMUST00000164242 Anks4bQ8K3X6 423 aa22■■□□□ 1.11
Cchcr1-202ENSMUST00000164242 CftrP26361 1476 aa21.99■■□□□ 1.11
Cchcr1-202ENSMUST00000164242 Esf1Q3V1V3 845 aaKnown RBP21.91■■□□□ 1.1
Cchcr1-202ENSMUST00000164242 Bcl11aQ9QYE3 773 aa21.89■■□□□ 1.09
Cchcr1-202ENSMUST00000164242 Cttnbp2B9EJA2 1648 aa21.87■■□□□ 1.09
Cchcr1-202ENSMUST00000164242 Top2bQ64511 1612 aa21.87■■□□□ 1.09
Cchcr1-202ENSMUST00000164242 Aplp2Q06335 707 aa21.79■■□□□ 1.08
Cchcr1-202ENSMUST00000164242 Smarca4Q3TKT4 1613 aaKnown RBP21.76■■□□□ 1.07
Cchcr1-202ENSMUST00000164242 Zeb1Q64318 1117 aa21.74■■□□□ 1.07
Cchcr1-202ENSMUST00000164242 Sall2Q9QX96 1004 aa21.73■■□□□ 1.07
Cchcr1-202ENSMUST00000164242 Cc2d2aQ8CFW7 1633 aa21.66■■□□□ 1.06
Cchcr1-202ENSMUST00000164242 Fmn1Q05860 1466 aa21.53■■□□□ 1.04
Cchcr1-202ENSMUST00000164242 Mier1Q5UAK0 511 aa21.5■■□□□ 1.03
Cchcr1-202ENSMUST00000164242 Rapgef2Q8CHG7 1496 aa21.48■■□□□ 1.03
Cchcr1-202ENSMUST00000164242 Gm38655A0A286YDK6 273 aa21.48■■□□□ 1.03
Cchcr1-202ENSMUST00000164242 NefmP08553 848 aa21.47■■□□□ 1.03
Cchcr1-202ENSMUST00000164242 Top2aQ01320 1528 aaKnown RBP21.46■■□□□ 1.03
Cchcr1-202ENSMUST00000164242 Iqgap2Q3UQ44 1575 aa21.46■■□□□ 1.03
Cchcr1-202ENSMUST00000164242 PrkcshO08795 521 aa21.42■■□□□ 1.02
Cchcr1-202ENSMUST00000164242 Atad2bE9Q166 1460 aaKnown RBP21.4■■□□□ 1.02
Cchcr1-202ENSMUST00000164242 Pds5bQ4VA53 1446 aaKnown RBP21.32■■□□□ 1
Cchcr1-202ENSMUST00000164242 Cep162Q6ZQ06 1403 aa21.31■■□□□ 1
Cchcr1-202ENSMUST00000164242 Cdk11bP24788 784 aaKnown RBP21.24■□□□□ 0.99
Cchcr1-202ENSMUST00000164242 UbtfP25976 765 aaKnown RBP21.22■□□□□ 0.99
Cchcr1-202ENSMUST00000164242 Myt1lP97500 1187 aa21.22■□□□□ 0.99
Cchcr1-202ENSMUST00000164242 Npm2Q80W85 207 aa21.17■□□□□ 0.98
Cchcr1-202ENSMUST00000164242 Ifnlr1Q8CGK5 535 aa21.17■□□□□ 0.98
Cchcr1-202ENSMUST00000164242 Fam71e1A1L3C1 212 aa21.16■□□□□ 0.98
Cchcr1-202ENSMUST00000164242 Nop58Q6DFW4 536 aaKnown RBP21.15■□□□□ 0.98
Cchcr1-202ENSMUST00000164242 TnnQ80Z71 1560 aa21.13■□□□□ 0.97
Cchcr1-202ENSMUST00000164242 Eif4g1Q6NZJ6 1600 aaKnown RBP21.1■□□□□ 0.97
Cchcr1-202ENSMUST00000164242 Wdr62Q3U3T8 1523 aa21.07■□□□□ 0.96
Cchcr1-202ENSMUST00000164242 Frmpd1A2AKB4 1549 aa21.06■□□□□ 0.96
Cchcr1-202ENSMUST00000164242 Aebp2Q9Z248 504 aaKnown RBP21.03■□□□□ 0.96
Cchcr1-202ENSMUST00000164242 Clip1Q922J3 1391 aa21.01■□□□□ 0.95
Cchcr1-202ENSMUST00000164242 Wdr66E9Q743 1299 aa20.94■□□□□ 0.94
Cchcr1-202ENSMUST00000164242 Lamc3Q9R0B6 1581 aa20.93■□□□□ 0.94
Cchcr1-202ENSMUST00000164242 Arhgap35Q91YM2 1499 aa20.92■□□□□ 0.94
Cchcr1-202ENSMUST00000164242 Ercc6F8VPZ5 1481 aa20.91■□□□□ 0.94
Cchcr1-202ENSMUST00000164242 Plekhg3Q4VAC9 1341 aa20.91■□□□□ 0.94
Cchcr1-202ENSMUST00000164242 PtprkP35822 1457 aa20.89■□□□□ 0.94
Cchcr1-202ENSMUST00000164242 Mapk8ip2Q9ERE9 830 aa20.89■□□□□ 0.93
Cchcr1-202ENSMUST00000164242 NrkQ9R0G8 1455 aa20.88■□□□□ 0.93
Cchcr1-202ENSMUST00000164242 Amer1Q7TS75 1132 aa20.88■□□□□ 0.93
Cchcr1-202ENSMUST00000164242 Unc13aQ4KUS2 1712 aa20.87■□□□□ 0.93
Cchcr1-202ENSMUST00000164242 ClspnQ80YR7 1315 aa20.85■□□□□ 0.93
Cchcr1-202ENSMUST00000164242 Kif15Q6P9L6 1387 aa20.85■□□□□ 0.93
Cchcr1-202ENSMUST00000164242 SafbD3YXK2 937 aaKnown RBP20.82■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Il27Q8K3I6 234 aa20.82■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Ppargc1bQ8VHJ7 1014 aa20.81■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Thoc2B1AZI6 1594 aaKnown RBP20.79■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Eea1Q8BL66 1411 aa20.79■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Shroom4Q1W617 1475 aa20.79■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Camsap1A2AHC3 1581 aa20.79■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Ncapd3Q6ZQK0 1506 aa20.78■□□□□ 0.92
Cchcr1-202ENSMUST00000164242 Arap1Q4LDD4 1452 aa20.75■□□□□ 0.91
Cchcr1-202ENSMUST00000164242 Map3k1P53349 1493 aa20.72■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms