RNA–Protein interactions for RNA: ENSMUST00000163821.1

Shtn1-202, Transcript of Shootin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shtn1, Length 3,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-202ENSMUST00000163821 Rhox8Q6VSS7 320 aa22.27■■□□□ 1.16
Shtn1-202ENSMUST00000163821 NischQ80TM9 1593 aa21.29■■□□□ 1
Shtn1-202ENSMUST00000163821 Ehmt2Q9Z148 1263 aaKnown RBP21.12■□□□□ 0.97
Shtn1-202ENSMUST00000163821 Ccdc136Q3TVA9 1136 aa20.47■□□□□ 0.87
Shtn1-202ENSMUST00000163821 Rpgrip1Q9EPQ2 1331 aa20.45■□□□□ 0.86
Shtn1-202ENSMUST00000163821 Abcc9P70170 1546 aa20.24■□□□□ 0.83
Shtn1-202ENSMUST00000163821 Acin1Q9JIX8 1338 aaKnown RBP20.07■□□□□ 0.8
Shtn1-202ENSMUST00000163821 Trim41Q5NCC3 630 aa19.86■□□□□ 0.77
Shtn1-202ENSMUST00000163821 Ccdc180J3QNE4 1664 aa19.82■□□□□ 0.76
Shtn1-202ENSMUST00000163821 Abcc8B2RUS7 1588 aa19.8■□□□□ 0.76
Shtn1-202ENSMUST00000163821 Pcgf6Q99NA9 353 aa19.8■□□□□ 0.76
Shtn1-202ENSMUST00000163821 Gab3Q8BSM5 595 aa19.77■□□□□ 0.76
Shtn1-202ENSMUST00000163821 Zeb1Q64318 1117 aa19.74■□□□□ 0.75
Shtn1-202ENSMUST00000163821 Cngb1E1AZ71 1325 aa19.58■□□□□ 0.72
Shtn1-202ENSMUST00000163821 Rtl1Q7M732 1744 aa19.55■□□□□ 0.72
Shtn1-202ENSMUST00000163821 HrcG5E8J6 738 aa19.53■□□□□ 0.72
Shtn1-202ENSMUST00000163821 Supt5hO55201 1082 aaKnown RBP19.5■□□□□ 0.71
Shtn1-202ENSMUST00000163821 Gm35339A0A140LHH9 1649 aa19.4■□□□□ 0.7
Shtn1-202ENSMUST00000163821 Wdr66E9Q743 1299 aa19.27■□□□□ 0.68
Shtn1-202ENSMUST00000163821 Ppargc1bQ8VHJ7 1014 aa19.18■□□□□ 0.66
Shtn1-202ENSMUST00000163821 Esf1Q3V1V3 845 aaKnown RBP19.16■□□□□ 0.66
Shtn1-202ENSMUST00000163821 UbtfP25976 765 aaKnown RBP19.07■□□□□ 0.64
Shtn1-202ENSMUST00000163821 Neurod1Q60867 357 aa19.04■□□□□ 0.64
Shtn1-202ENSMUST00000163821 Myt1lP97500 1187 aa19.01■□□□□ 0.63
Shtn1-202ENSMUST00000163821 Zcchc6Q5BLK4 1491 aaKnown RBP19.01■□□□□ 0.63
Shtn1-202ENSMUST00000163821 Mier1Q5UAK0 511 aa18.94■□□□□ 0.62
Shtn1-202ENSMUST00000163821 Dcaf1Q80TR8 1506 aa18.94■□□□□ 0.62
Shtn1-202ENSMUST00000163821 Chic1Q8CBW7 227 aa18.91■□□□□ 0.62
Shtn1-202ENSMUST00000163821 Las1lA2BE28 776 aaKnown RBP18.91■□□□□ 0.62
Shtn1-202ENSMUST00000163821 NefmP08553 848 aa18.88■□□□□ 0.61
Shtn1-202ENSMUST00000163821 Sall2Q9QX96 1004 aa18.82■□□□□ 0.6
Shtn1-202ENSMUST00000163821 Npm2Q80W85 207 aa18.7■□□□□ 0.58
Shtn1-202ENSMUST00000163821 Rb1cc1Q9ESK9 1588 aa18.67■□□□□ 0.58
Shtn1-202ENSMUST00000163821 Gm38655A0A286YDK6 273 aa18.63■□□□□ 0.57
Shtn1-202ENSMUST00000163821 Csrnp3P59055 597 aa18.6■□□□□ 0.57
Shtn1-202ENSMUST00000163821 Cep164Q5DU05 1446 aa18.57■□□□□ 0.56
Shtn1-202ENSMUST00000163821 Cdk11bP24788 784 aaKnown RBP18.57■□□□□ 0.56
Shtn1-202ENSMUST00000163821 Nop58Q6DFW4 536 aaKnown RBP18.55■□□□□ 0.56
Shtn1-202ENSMUST00000163821 Aebp2Q9Z248 504 aaKnown RBP18.46■□□□□ 0.55
Shtn1-202ENSMUST00000163821 Ap3b1Q9Z1T1 1105 aa18.41■□□□□ 0.54
Shtn1-202ENSMUST00000163821 Plekhg3Q4VAC9 1341 aa18.39■□□□□ 0.53
Shtn1-202ENSMUST00000163821 1700123L14RikQ3V2K7 440 aa18.36■□□□□ 0.53
Shtn1-202ENSMUST00000163821 Rsf1E9PWW9 1441 aaKnown RBP18.36■□□□□ 0.53
Shtn1-202ENSMUST00000163821 Mapk8ip2Q9ERE9 830 aa18.35■□□□□ 0.53
Shtn1-202ENSMUST00000163821 CenpbP27790 599 aa18.34■□□□□ 0.53
Shtn1-202ENSMUST00000163821 Il27Q8K3I6 234 aa18.32■□□□□ 0.52
Shtn1-202ENSMUST00000163821 Eid3Q3V124 375 aa18.3■□□□□ 0.52
Shtn1-202ENSMUST00000163821 Anks4bQ8K3X6 423 aa18.29■□□□□ 0.52
Shtn1-202ENSMUST00000163821 Baz1aO88379 1555 aa18.28■□□□□ 0.52
Shtn1-202ENSMUST00000163821 TonslQ6NZL6 1363 aa18.27■□□□□ 0.52
Shtn1-202ENSMUST00000163821 Ube2uB1AUC4 352 aa18.24■□□□□ 0.51
Shtn1-202ENSMUST00000163821 Slc24a1Q91WD8 1130 aa18.24■□□□□ 0.51
Shtn1-202ENSMUST00000163821 ClspnQ80YR7 1315 aa18.2■□□□□ 0.5
Shtn1-202ENSMUST00000163821 Kdm5dQ62240 1548 aa18.17■□□□□ 0.5
Shtn1-202ENSMUST00000163821 Ccdc88bQ4QRL3 1481 aa18.17■□□□□ 0.5
Shtn1-202ENSMUST00000163821 Fam50aQ9WV03 339 aaKnown RBP18.09■□□□□ 0.49
Shtn1-202ENSMUST00000163821 Brd4Q9ESU6 1400 aaKnown RBP18.06■□□□□ 0.48
Shtn1-202ENSMUST00000163821 ScribQ80U72 1612 aa18.03■□□□□ 0.48
Shtn1-202ENSMUST00000163821 NacadQ5SWP3 1504 aa18■□□□□ 0.47
Shtn1-202ENSMUST00000163821 NclP09405 707 aaKnown RBP17.99■□□□□ 0.47
Shtn1-202ENSMUST00000163821 Lmod2Q3UHZ5 550 aa17.94■□□□□ 0.46
Shtn1-202ENSMUST00000163821 Golga3P55937 1487 aa17.93■□□□□ 0.46
Shtn1-202ENSMUST00000163821 Clip1Q922J3 1391 aa17.92■□□□□ 0.46
Shtn1-202ENSMUST00000163821 Aplp2Q06335 707 aa17.89■□□□□ 0.45
Shtn1-202ENSMUST00000163821 SafbD3YXK2 937 aaKnown RBP17.88■□□□□ 0.45
Shtn1-202ENSMUST00000163821 Cecr2E9Q2Z1 1453 aa17.84■□□□□ 0.45
Shtn1-202ENSMUST00000163821 Eif5bQ05D44 1216 aaKnown RBP17.83■□□□□ 0.44
Shtn1-202ENSMUST00000163821 Hnrnpul2Q00PI9 745 aaKnown RBP17.77■□□□□ 0.44
Shtn1-202ENSMUST00000163821 Fam71e1A1L3C1 212 aa17.71■□□□□ 0.43
Shtn1-202ENSMUST00000163821 Smarca2Q6DIC0 1577 aa17.71■□□□□ 0.43
Shtn1-202ENSMUST00000163821 Tnnt3Q9QZ47 272 aa17.7■□□□□ 0.42
Shtn1-202ENSMUST00000163821 Ttbk1Q6PCN3 1308 aa17.68■□□□□ 0.42
Shtn1-202ENSMUST00000163821 Stra8P70278 393 aa17.63■□□□□ 0.41
Shtn1-202ENSMUST00000163821 Myt1Q8CFC2 1127 aa17.58■□□□□ 0.4
Shtn1-202ENSMUST00000163821 Cep162Q6ZQ06 1403 aa17.53■□□□□ 0.4
Shtn1-202ENSMUST00000163821 Synj1Q8CHC4 1574 aa17.53■□□□□ 0.4
Shtn1-202ENSMUST00000163821 Sycp2Q9CUU3 1500 aa17.49■□□□□ 0.39
Shtn1-202ENSMUST00000163821 BlmO88700 1416 aa17.48■□□□□ 0.39
Shtn1-202ENSMUST00000163821 Chic2Q9D9G3 165 aa17.48■□□□□ 0.39
Shtn1-202ENSMUST00000163821 Pelp1Q9DBD5 1123 aaKnown RBP17.48■□□□□ 0.39
Shtn1-202ENSMUST00000163821 Setd5Q5XJV7 1441 aa17.47■□□□□ 0.39
Shtn1-202ENSMUST00000163821 Rapgef2Q8CHG7 1496 aa17.47■□□□□ 0.39
Shtn1-202ENSMUST00000163821 CftrP26361 1476 aa17.46■□□□□ 0.39
Shtn1-202ENSMUST00000163821 Anp32aO35381 247 aa17.45■□□□□ 0.38
Shtn1-202ENSMUST00000163821 DiexfQ8BTT6 772 aaKnown RBP17.45■□□□□ 0.38
Shtn1-202ENSMUST00000163821 Calr4Q3TQS0 420 aa17.43■□□□□ 0.38
Shtn1-202ENSMUST00000163821 P3h3Q8CG70 732 aa17.43■□□□□ 0.38
Shtn1-202ENSMUST00000163821 Crybg2B7ZCC2 1516 aa17.42■□□□□ 0.38
Shtn1-202ENSMUST00000163821 NrdcQ8BHG1 1161 aa17.41■□□□□ 0.38
Shtn1-202ENSMUST00000163821 Hspa5P20029 655 aaKnown RBP17.4■□□□□ 0.38
Shtn1-202ENSMUST00000163821 Ppp4r2Q0VGB7 417 aa17.38■□□□□ 0.37
Shtn1-202ENSMUST00000163821 Zbtb4Q5F293 982 aa17.38■□□□□ 0.37
Shtn1-202ENSMUST00000163821 Sin3aQ60520 1274 aaKnown RBP17.38■□□□□ 0.37
Shtn1-202ENSMUST00000163821 Zbtb7cQ8VCZ7 619 aa17.33■□□□□ 0.36
Shtn1-202ENSMUST00000163821 Npm1Q61937 292 aaKnown RBP17.31■□□□□ 0.36
Shtn1-202ENSMUST00000163821 Eea1Q8BL66 1411 aa17.29■□□□□ 0.36
Shtn1-202ENSMUST00000163821 Mrs2Q5NCE8 434 aa17.28■□□□□ 0.36
Shtn1-202ENSMUST00000163821 Fmn1Q05860 1466 aa17.22■□□□□ 0.35
Shtn1-202ENSMUST00000163821 Nolc1E9Q5C9 702 aaKnown RBP17.19■□□□□ 0.34
Shtn1-202ENSMUST00000163821 Kif15Q6P9L6 1387 aa17.18■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms