RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Rhox8Q6VSS7 320 aa23.64■■□□□ 1.37
Ssh1-204ENSMUST00000159592 Rpgrip1Q9EPQ2 1331 aa22.25■■□□□ 1.15
Ssh1-204ENSMUST00000159592 Ehmt2Q9Z148 1263 aaKnown RBP21.99■■□□□ 1.11
Ssh1-204ENSMUST00000159592 Las1lA2BE28 776 aaKnown RBP21.37■■□□□ 1.01
Ssh1-204ENSMUST00000159592 Cngb1E1AZ71 1325 aa21.19■□□□□ 0.98
Ssh1-204ENSMUST00000159592 Ccdc136Q3TVA9 1136 aa21.14■□□□□ 0.97
Ssh1-204ENSMUST00000159592 Wdr66E9Q743 1299 aa21.12■□□□□ 0.97
Ssh1-204ENSMUST00000159592 Zeb1Q64318 1117 aa21.11■□□□□ 0.97
Ssh1-204ENSMUST00000159592 NischQ80TM9 1593 aa20.8■□□□□ 0.92
Ssh1-204ENSMUST00000159592 Gab3Q8BSM5 595 aa20.75■□□□□ 0.91
Ssh1-204ENSMUST00000159592 Acin1Q9JIX8 1338 aaKnown RBP20.72■□□□□ 0.91
Ssh1-204ENSMUST00000159592 Esf1Q3V1V3 845 aaKnown RBP20.67■□□□□ 0.9
Ssh1-204ENSMUST00000159592 Pelp1Q9DBD5 1123 aaKnown RBP20.65■□□□□ 0.9
Ssh1-204ENSMUST00000159592 Trim41Q5NCC3 630 aa20.57■□□□□ 0.88
Ssh1-204ENSMUST00000159592 Ccdc180J3QNE4 1664 aa20.52■□□□□ 0.88
Ssh1-204ENSMUST00000159592 Rtl1Q7M732 1744 aa20.49■□□□□ 0.87
Ssh1-204ENSMUST00000159592 Ube2uB1AUC4 352 aa20.48■□□□□ 0.87
Ssh1-204ENSMUST00000159592 CenpbP27790 599 aa20.38■□□□□ 0.85
Ssh1-204ENSMUST00000159592 Myt1lP97500 1187 aa20.32■□□□□ 0.84
Ssh1-204ENSMUST00000159592 Npm2Q80W85 207 aa20.32■□□□□ 0.84
Ssh1-204ENSMUST00000159592 Pcgf6Q99NA9 353 aa20.23■□□□□ 0.83
Ssh1-204ENSMUST00000159592 NefmP08553 848 aa20.22■□□□□ 0.83
Ssh1-204ENSMUST00000159592 UbtfP25976 765 aaKnown RBP20.17■□□□□ 0.82
Ssh1-204ENSMUST00000159592 Amer1Q7TS75 1132 aa20.11■□□□□ 0.81
Ssh1-204ENSMUST00000159592 Slc24a1Q91WD8 1130 aa19.97■□□□□ 0.79
Ssh1-204ENSMUST00000159592 Cdk11bP24788 784 aaKnown RBP19.92■□□□□ 0.78
Ssh1-204ENSMUST00000159592 Stra8P70278 393 aa19.91■□□□□ 0.78
Ssh1-204ENSMUST00000159592 HrcG5E8J6 738 aa19.86■□□□□ 0.77
Ssh1-204ENSMUST00000159592 Supt5hO55201 1082 aaKnown RBP19.83■□□□□ 0.76
Ssh1-204ENSMUST00000159592 Ttbk1Q6PCN3 1308 aa19.77■□□□□ 0.76
Ssh1-204ENSMUST00000159592 Ppargc1bQ8VHJ7 1014 aa19.72■□□□□ 0.75
Ssh1-204ENSMUST00000159592 Nop58Q6DFW4 536 aaKnown RBP19.71■□□□□ 0.75
Ssh1-204ENSMUST00000159592 Myt1Q8CFC2 1127 aa19.68■□□□□ 0.74
Ssh1-204ENSMUST00000159592 Tnnt3Q9QZ47 272 aa19.51■□□□□ 0.71
Ssh1-204ENSMUST00000159592 NclP09405 707 aaKnown RBP19.43■□□□□ 0.7
Ssh1-204ENSMUST00000159592 Eif5bQ05D44 1216 aaKnown RBP19.42■□□□□ 0.7
Ssh1-204ENSMUST00000159592 4933416C03RikQ3V063 378 aa19.41■□□□□ 0.7
Ssh1-204ENSMUST00000159592 Ap3b1Q9Z1T1 1105 aa19.38■□□□□ 0.69
Ssh1-204ENSMUST00000159592 Mier1Q5UAK0 511 aa19.38■□□□□ 0.69
Ssh1-204ENSMUST00000159592 Fam50aQ9WV03 339 aaKnown RBP19.37■□□□□ 0.69
Ssh1-204ENSMUST00000159592 TonslQ6NZL6 1363 aa19.37■□□□□ 0.69
Ssh1-204ENSMUST00000159592 Il27Q8K3I6 234 aa19.34■□□□□ 0.69
Ssh1-204ENSMUST00000159592 NrdcQ8BHG1 1161 aa19.34■□□□□ 0.69
Ssh1-204ENSMUST00000159592 Neurod1Q60867 357 aa19.32■□□□□ 0.68
Ssh1-204ENSMUST00000159592 Zcchc6Q5BLK4 1491 aaKnown RBP19.32■□□□□ 0.68
Ssh1-204ENSMUST00000159592 Abcc9P70170 1546 aa19.31■□□□□ 0.68
Ssh1-204ENSMUST00000159592 NeflP08551 543 aa19.21■□□□□ 0.67
Ssh1-204ENSMUST00000159592 Anp32bQ9EST5 272 aaKnown RBP19.1■□□□□ 0.65
Ssh1-204ENSMUST00000159592 ClspnQ80YR7 1315 aa19.09■□□□□ 0.65
Ssh1-204ENSMUST00000159592 Rtl5Q5DTT4 599 aa19.08■□□□□ 0.64
Ssh1-204ENSMUST00000159592 DiexfQ8BTT6 772 aaKnown RBP19.07■□□□□ 0.64
Ssh1-204ENSMUST00000159592 Gm38655A0A286YDK6 273 aa19.06■□□□□ 0.64
Ssh1-204ENSMUST00000159592 Csrnp3P59055 597 aa19.05■□□□□ 0.64
Ssh1-204ENSMUST00000159592 Gm35339A0A140LHH9 1649 aa19.04■□□□□ 0.64
Ssh1-204ENSMUST00000159592 4930567H17RikQ3V0K5 233 aa19.04■□□□□ 0.64
Ssh1-204ENSMUST00000159592 Anp32aO35381 247 aa18.94■□□□□ 0.62
Ssh1-204ENSMUST00000159592 Sall2Q9QX96 1004 aa18.94■□□□□ 0.62
Ssh1-204ENSMUST00000159592 Plekhg3Q4VAC9 1341 aa18.93■□□□□ 0.62
Ssh1-204ENSMUST00000159592 Anks4bQ8K3X6 423 aa18.91■□□□□ 0.62
Ssh1-204ENSMUST00000159592 Dcaf1Q80TR8 1506 aa18.91■□□□□ 0.62
Ssh1-204ENSMUST00000159592 Mapk8ip2Q9ERE9 830 aa18.9■□□□□ 0.62
Ssh1-204ENSMUST00000159592 Os9Q8K2C7 672 aa18.85■□□□□ 0.61
Ssh1-204ENSMUST00000159592 DaxxO35613 739 aa18.78■□□□□ 0.6
Ssh1-204ENSMUST00000159592 Lmod2Q3UHZ5 550 aa18.74■□□□□ 0.59
Ssh1-204ENSMUST00000159592 Abcc8B2RUS7 1588 aa18.74■□□□□ 0.59
Ssh1-204ENSMUST00000159592 Eid3Q3V124 375 aa18.74■□□□□ 0.59
Ssh1-204ENSMUST00000159592 Aplp2Q06335 707 aa18.72■□□□□ 0.59
Ssh1-204ENSMUST00000159592 Zbtb7cQ8VCZ7 619 aa18.63■□□□□ 0.57
Ssh1-204ENSMUST00000159592 Cep164Q5DU05 1446 aa18.61■□□□□ 0.57
Ssh1-204ENSMUST00000159592 Zbtb4Q5F293 982 aa18.56■□□□□ 0.56
Ssh1-204ENSMUST00000159592 Chic1Q8CBW7 227 aa18.55■□□□□ 0.56
Ssh1-204ENSMUST00000159592 Calr4Q3TQS0 420 aa18.52■□□□□ 0.56
Ssh1-204ENSMUST00000159592 Ppp4r2Q0VGB7 417 aa18.52■□□□□ 0.55
Ssh1-204ENSMUST00000159592 ArxO35085 564 aa18.48■□□□□ 0.55
Ssh1-204ENSMUST00000159592 Clip1Q922J3 1391 aa18.48■□□□□ 0.55
Ssh1-204ENSMUST00000159592 1700123L14RikQ3V2K7 440 aa18.46■□□□□ 0.55
Ssh1-204ENSMUST00000159592 Rb1cc1Q9ESK9 1588 aa18.46■□□□□ 0.55
Ssh1-204ENSMUST00000159592 Hnrnpul2Q00PI9 745 aaKnown RBP18.42■□□□□ 0.54
Ssh1-204ENSMUST00000159592 Brd4Q9ESU6 1400 aaKnown RBP18.37■□□□□ 0.53
Ssh1-204ENSMUST00000159592 Polr3glQ8R0C0 218 aa18.37■□□□□ 0.53
Ssh1-204ENSMUST00000159592 Nlrp6Q91WS2 869 aa18.36■□□□□ 0.53
Ssh1-204ENSMUST00000159592 Npm1Q61937 292 aaKnown RBP18.35■□□□□ 0.53
Ssh1-204ENSMUST00000159592 Prdm10Q3UTQ7 1184 aa18.34■□□□□ 0.53
Ssh1-204ENSMUST00000159592 Fam71e1A1L3C1 212 aa18.33■□□□□ 0.52
Ssh1-204ENSMUST00000159592 Aebp2Q9Z248 504 aaKnown RBP18.31■□□□□ 0.52
Ssh1-204ENSMUST00000159592 Wdr43Q6ZQL4 677 aaKnown RBP18.31■□□□□ 0.52
Ssh1-204ENSMUST00000159592 Erich6D3Z6S9 713 aa18.26■□□□□ 0.51
Ssh1-204ENSMUST00000159592 Hsp90aa1P07901 733 aaKnown RBP18.18■□□□□ 0.5
Ssh1-204ENSMUST00000159592 Mrs2Q5NCE8 434 aa18.18■□□□□ 0.5
Ssh1-204ENSMUST00000159592 Rad21Q61550 635 aaKnown RBP18.18■□□□□ 0.5
Ssh1-204ENSMUST00000159592 Ccer2J3QPU5 274 aa18.16■□□□□ 0.5
Ssh1-204ENSMUST00000159592 Chic2Q9D9G3 165 aa18.12■□□□□ 0.49
Ssh1-204ENSMUST00000159592 Rangap1P46061 589 aaKnown RBP18.11■□□□□ 0.49
Ssh1-204ENSMUST00000159592 Ifnlr1Q8CGK5 535 aa18.1■□□□□ 0.49
Ssh1-204ENSMUST00000159592 Atp1b4Q99ME6 356 aa18.09■□□□□ 0.49
Ssh1-204ENSMUST00000159592 BlmO88700 1416 aa18.09■□□□□ 0.49
Ssh1-204ENSMUST00000159592 Upf2A2AT37 1269 aaKnown RBP18.06■□□□□ 0.48
Ssh1-204ENSMUST00000159592 P3h3Q8CG70 732 aa18.06■□□□□ 0.48
Ssh1-204ENSMUST00000159592 Ccdc9Q8VC31 543 aaKnown RBP18■□□□□ 0.47
Ssh1-204ENSMUST00000159592 Fkbp15Q6P9Q6 1216 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms