RNA–Protein interactions for RNA: ENSMUST00000156481.7

Med28-205, Transcript of Mediator of RNA polymerase II transcription subunit 28, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Med28, Length 4,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Med28-205ENSMUST00000156481 Rpgrip1Q9EPQ2 1331 aa21.49■■□□□ 1.03
Med28-205ENSMUST00000156481 Rhox8Q6VSS7 320 aa21.16■□□□□ 0.98
Med28-205ENSMUST00000156481 Las1lA2BE28 776 aaKnown RBP20.72■□□□□ 0.91
Med28-205ENSMUST00000156481 Ehmt2Q9Z148 1263 aaKnown RBP20.49■□□□□ 0.87
Med28-205ENSMUST00000156481 Cngb1E1AZ71 1325 aa20.17■□□□□ 0.82
Med28-205ENSMUST00000156481 Acin1Q9JIX8 1338 aaKnown RBP19.98■□□□□ 0.79
Med28-205ENSMUST00000156481 Pcgf6Q99NA9 353 aa19.85■□□□□ 0.77
Med28-205ENSMUST00000156481 CenpbP27790 599 aa19.76■□□□□ 0.75
Med28-205ENSMUST00000156481 Zeb1Q64318 1117 aa19.76■□□□□ 0.75
Med28-205ENSMUST00000156481 Myt1Q8CFC2 1127 aa19.72■□□□□ 0.75
Med28-205ENSMUST00000156481 Wdr66E9Q743 1299 aa19.59■□□□□ 0.73
Med28-205ENSMUST00000156481 Pelp1Q9DBD5 1123 aaKnown RBP19.5■□□□□ 0.71
Med28-205ENSMUST00000156481 DiexfQ8BTT6 772 aaKnown RBP19.42■□□□□ 0.7
Med28-205ENSMUST00000156481 Amer1Q7TS75 1132 aa19.33■□□□□ 0.68
Med28-205ENSMUST00000156481 Supt5hO55201 1082 aaKnown RBP19.24■□□□□ 0.67
Med28-205ENSMUST00000156481 Neurod1Q60867 357 aa19.02■□□□□ 0.64
Med28-205ENSMUST00000156481 NefmP08553 848 aa19.02■□□□□ 0.64
Med28-205ENSMUST00000156481 Cdk11bP24788 784 aaKnown RBP19.01■□□□□ 0.63
Med28-205ENSMUST00000156481 Ccdc136Q3TVA9 1136 aa18.9■□□□□ 0.62
Med28-205ENSMUST00000156481 Ttbk1Q6PCN3 1308 aa18.85■□□□□ 0.61
Med28-205ENSMUST00000156481 Nop58Q6DFW4 536 aaKnown RBP18.8■□□□□ 0.6
Med28-205ENSMUST00000156481 Trim41Q5NCC3 630 aa18.79■□□□□ 0.6
Med28-205ENSMUST00000156481 Gab3Q8BSM5 595 aa18.73■□□□□ 0.59
Med28-205ENSMUST00000156481 Csrnp3P59055 597 aa18.69■□□□□ 0.58
Med28-205ENSMUST00000156481 Ccdc180J3QNE4 1664 aa18.64■□□□□ 0.58
Med28-205ENSMUST00000156481 Anks4bQ8K3X6 423 aa18.57■□□□□ 0.56
Med28-205ENSMUST00000156481 HrcG5E8J6 738 aa18.56■□□□□ 0.56
Med28-205ENSMUST00000156481 1700123L14RikQ3V2K7 440 aa18.56■□□□□ 0.56
Med28-205ENSMUST00000156481 Tnnt3Q9QZ47 272 aa18.55■□□□□ 0.56
Med28-205ENSMUST00000156481 Gm38655A0A286YDK6 273 aa18.53■□□□□ 0.56
Med28-205ENSMUST00000156481 Aplp2Q06335 707 aa18.53■□□□□ 0.56
Med28-205ENSMUST00000156481 Stra8P70278 393 aa18.51■□□□□ 0.55
Med28-205ENSMUST00000156481 Ppargc1bQ8VHJ7 1014 aa18.51■□□□□ 0.55
Med28-205ENSMUST00000156481 NischQ80TM9 1593 aa18.46■□□□□ 0.55
Med28-205ENSMUST00000156481 Rtl5Q5DTT4 599 aa18.46■□□□□ 0.55
Med28-205ENSMUST00000156481 4933416C03RikQ3V063 378 aa18.4■□□□□ 0.54
Med28-205ENSMUST00000156481 UbtfP25976 765 aaKnown RBP18.4■□□□□ 0.54
Med28-205ENSMUST00000156481 Bcl11aQ9QYE3 773 aa18.37■□□□□ 0.53
Med28-205ENSMUST00000156481 Slc24a1Q91WD8 1130 aa18.33■□□□□ 0.52
Med28-205ENSMUST00000156481 Sall2Q9QX96 1004 aa18.33■□□□□ 0.52
Med28-205ENSMUST00000156481 Anp32aO35381 247 aa18.22■□□□□ 0.51
Med28-205ENSMUST00000156481 Rtl1Q7M732 1744 aa18.21■□□□□ 0.5
Med28-205ENSMUST00000156481 Mier1Q5UAK0 511 aa18.15■□□□□ 0.5
Med28-205ENSMUST00000156481 ClspnQ80YR7 1315 aa18.11■□□□□ 0.49
Med28-205ENSMUST00000156481 Ube2uB1AUC4 352 aa18.11■□□□□ 0.49
Med28-205ENSMUST00000156481 Myt1lP97500 1187 aa18.09■□□□□ 0.49
Med28-205ENSMUST00000156481 4930567H17RikQ3V0K5 233 aa18.01■□□□□ 0.47
Med28-205ENSMUST00000156481 Fam71e1A1L3C1 212 aa18.01■□□□□ 0.47
Med28-205ENSMUST00000156481 Esf1Q3V1V3 845 aaKnown RBP17.99■□□□□ 0.47
Med28-205ENSMUST00000156481 Dcaf1Q80TR8 1506 aa17.98■□□□□ 0.47
Med28-205ENSMUST00000156481 TonslQ6NZL6 1363 aa17.98■□□□□ 0.47
Med28-205ENSMUST00000156481 Eif5bQ05D44 1216 aaKnown RBP17.97■□□□□ 0.47
Med28-205ENSMUST00000156481 Mapk8ip2Q9ERE9 830 aa17.96■□□□□ 0.47
Med28-205ENSMUST00000156481 Npm2Q80W85 207 aa17.9■□□□□ 0.46
Med28-205ENSMUST00000156481 DaxxO35613 739 aa17.89■□□□□ 0.46
Med28-205ENSMUST00000156481 NclP09405 707 aaKnown RBP17.76■□□□□ 0.43
Med28-205ENSMUST00000156481 NrdcQ8BHG1 1161 aa17.76■□□□□ 0.43
Med28-205ENSMUST00000156481 Ap3b1Q9Z1T1 1105 aa17.67■□□□□ 0.42
Med28-205ENSMUST00000156481 Ccdc9Q8VC31 543 aaKnown RBP17.65■□□□□ 0.42
Med28-205ENSMUST00000156481 NeflP08551 543 aa17.65■□□□□ 0.42
Med28-205ENSMUST00000156481 PrkcshO08795 521 aa17.65■□□□□ 0.42
Med28-205ENSMUST00000156481 Calr4Q3TQS0 420 aa17.64■□□□□ 0.41
Med28-205ENSMUST00000156481 Abcc9P70170 1546 aa17.63■□□□□ 0.41
Med28-205ENSMUST00000156481 Ppp4r2Q0VGB7 417 aa17.6■□□□□ 0.41
Med28-205ENSMUST00000156481 Aebp2Q9Z248 504 aaKnown RBP17.55■□□□□ 0.4
Med28-205ENSMUST00000156481 SafbD3YXK2 937 aaKnown RBP17.54■□□□□ 0.4
Med28-205ENSMUST00000156481 Hsp90aa1P07901 733 aaKnown RBP17.53■□□□□ 0.4
Med28-205ENSMUST00000156481 Wdr43Q6ZQL4 677 aaKnown RBP17.48■□□□□ 0.39
Med28-205ENSMUST00000156481 Hnrnpul2Q00PI9 745 aaKnown RBP17.43■□□□□ 0.38
Med28-205ENSMUST00000156481 Irx3P81067 507 aa17.43■□□□□ 0.38
Med28-205ENSMUST00000156481 Ccdc27Q3V036 639 aa17.42■□□□□ 0.38
Med28-205ENSMUST00000156481 Fam50aQ9WV03 339 aaKnown RBP17.4■□□□□ 0.38
Med28-205ENSMUST00000156481 Anp32bQ9EST5 272 aaKnown RBP17.37■□□□□ 0.37
Med28-205ENSMUST00000156481 Eid3Q3V124 375 aa17.32■□□□□ 0.36
Med28-205ENSMUST00000156481 Pknox2Q8BG99 474 aa17.26■□□□□ 0.35
Med28-205ENSMUST00000156481 Ythdc1E9Q5K9 736 aaKnown RBP17.25■□□□□ 0.35
Med28-205ENSMUST00000156481 Abcc8B2RUS7 1588 aa17.24■□□□□ 0.35
Med28-205ENSMUST00000156481 Ifnlr1Q8CGK5 535 aa17.24■□□□□ 0.35
Med28-205ENSMUST00000156481 Gm35339A0A140LHH9 1649 aa17.23■□□□□ 0.35
Med28-205ENSMUST00000156481 Hdac5Q9Z2V6 1113 aa17.21■□□□□ 0.34
Med28-205ENSMUST00000156481 Upf2A2AT37 1269 aaKnown RBP17.2■□□□□ 0.34
Med28-205ENSMUST00000156481 Cep164Q5DU05 1446 aa17.18■□□□□ 0.34
Med28-205ENSMUST00000156481 Plekhg3Q4VAC9 1341 aa17.17■□□□□ 0.34
Med28-205ENSMUST00000156481 Gtf3c3Q3TMP1 882 aa17.17■□□□□ 0.34
Med28-205ENSMUST00000156481 ArxO35085 564 aa17.12■□□□□ 0.33
Med28-205ENSMUST00000156481 Supt16hQ920B9 1047 aa17.11■□□□□ 0.33
Med28-205ENSMUST00000156481 CanxP35564 591 aaKnown RBP17.04■□□□□ 0.32
Med28-205ENSMUST00000156481 Taok2Q6ZQ29 1240 aa17.01■□□□□ 0.31
Med28-205ENSMUST00000156481 Mrs2Q5NCE8 434 aa17■□□□□ 0.31
Med28-205ENSMUST00000156481 Lmod3E9QA62 571 aa16.99■□□□□ 0.31
Med28-205ENSMUST00000156481 Chic1Q8CBW7 227 aa16.98■□□□□ 0.31
Med28-205ENSMUST00000156481 P3h3Q8CG70 732 aa16.97■□□□□ 0.31
Med28-205ENSMUST00000156481 Nolc1E9Q5C9 702 aaKnown RBP16.94■□□□□ 0.3
Med28-205ENSMUST00000156481 Zbtb7cQ8VCZ7 619 aa16.94■□□□□ 0.3
Med28-205ENSMUST00000156481 AU015836B2RUM3 263 aa16.93■□□□□ 0.3
Med28-205ENSMUST00000156481 Plcd4Q8K3R3 807 aa16.93■□□□□ 0.3
Med28-205ENSMUST00000156481 Zcchc6Q5BLK4 1491 aaKnown RBP16.9■□□□□ 0.3
Med28-205ENSMUST00000156481 Trim44Q9QXA7 346 aa16.89■□□□□ 0.29
Med28-205ENSMUST00000156481 Slc4a3P16283 1227 aa16.84■□□□□ 0.29
Med28-205ENSMUST00000156481 Il27Q8K3I6 234 aa16.8■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 248.3 ms