RNA–Protein interactions for RNA: ENSMUST00000146006.2

Shank2-205, Transcript of SH3 and multiple ankyrin repeat domains protein 2, mousemouse

TSL 2 BASIC

Gene Shank2, Length 7,666 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2-205ENSMUST00000146006 Rhox8Q6VSS7 320 aa18.33■□□□□ 0.52
Shank2-205ENSMUST00000146006 NischQ80TM9 1593 aa16.6■□□□□ 0.25
Shank2-205ENSMUST00000146006 Esf1Q3V1V3 845 aaKnown RBP16.43■□□□□ 0.22
Shank2-205ENSMUST00000146006 Cngb1E1AZ71 1325 aa16.31■□□□□ 0.2
Shank2-205ENSMUST00000146006 Ccdc136Q3TVA9 1136 aa16.28■□□□□ 0.2
Shank2-205ENSMUST00000146006 Ehmt2Q9Z148 1263 aaKnown RBP16.23■□□□□ 0.19
Shank2-205ENSMUST00000146006 Zeb1Q64318 1117 aa16.17■□□□□ 0.18
Shank2-205ENSMUST00000146006 Ube2uB1AUC4 352 aa16.17■□□□□ 0.18
Shank2-205ENSMUST00000146006 Npm2Q80W85 207 aa16■□□□□ 0.15
Shank2-205ENSMUST00000146006 Rpgrip1Q9EPQ2 1331 aa15.99■□□□□ 0.15
Shank2-205ENSMUST00000146006 Gab3Q8BSM5 595 aa15.9■□□□□ 0.14
Shank2-205ENSMUST00000146006 Las1lA2BE28 776 aaKnown RBP15.88■□□□□ 0.13
Shank2-205ENSMUST00000146006 Trim41Q5NCC3 630 aa15.87■□□□□ 0.13
Shank2-205ENSMUST00000146006 Wdr66E9Q743 1299 aa15.85■□□□□ 0.13
Shank2-205ENSMUST00000146006 Myt1lP97500 1187 aa15.81■□□□□ 0.12
Shank2-205ENSMUST00000146006 Abcc9P70170 1546 aa15.66■□□□□ 0.1
Shank2-205ENSMUST00000146006 Pelp1Q9DBD5 1123 aaKnown RBP15.49■□□□□ 0.07
Shank2-205ENSMUST00000146006 Rtl1Q7M732 1744 aa15.47■□□□□ 0.07
Shank2-205ENSMUST00000146006 Gm35339A0A140LHH9 1649 aa15.41■□□□□ 0.06
Shank2-205ENSMUST00000146006 Il27Q8K3I6 234 aa15.38■□□□□ 0.05
Shank2-205ENSMUST00000146006 UbtfP25976 765 aaKnown RBP15.3■□□□□ 0.04
Shank2-205ENSMUST00000146006 Ccdc180J3QNE4 1664 aa15.28■□□□□ 0.04
Shank2-205ENSMUST00000146006 Zcchc6Q5BLK4 1491 aaKnown RBP15.25■□□□□ 0.03
Shank2-205ENSMUST00000146006 Abcc8B2RUS7 1588 aa15.19■□□□□ 0.02
Shank2-205ENSMUST00000146006 Slc24a1Q91WD8 1130 aa15.13■□□□□ 0.01
Shank2-205ENSMUST00000146006 Ap3b1Q9Z1T1 1105 aa15.04■□□□□ -0
Shank2-205ENSMUST00000146006 Stra8P70278 393 aa15□□□□□ -0.01
Shank2-205ENSMUST00000146006 Os9Q8K2C7 672 aa14.99□□□□□ -0.01
Shank2-205ENSMUST00000146006 Fam50aQ9WV03 339 aaKnown RBP14.95□□□□□ -0.02
Shank2-205ENSMUST00000146006 NefmP08553 848 aa14.94□□□□□ -0.02
Shank2-205ENSMUST00000146006 Neurod1Q60867 357 aa14.92□□□□□ -0.02
Shank2-205ENSMUST00000146006 Amer1Q7TS75 1132 aa14.87□□□□□ -0.03
Shank2-205ENSMUST00000146006 Npm1Q61937 292 aaKnown RBP14.84□□□□□ -0.03
Shank2-205ENSMUST00000146006 Anp32bQ9EST5 272 aaKnown RBP14.81□□□□□ -0.04
Shank2-205ENSMUST00000146006 HrcG5E8J6 738 aa14.78□□□□□ -0.04
Shank2-205ENSMUST00000146006 NclP09405 707 aaKnown RBP14.76□□□□□ -0.05
Shank2-205ENSMUST00000146006 Acin1Q9JIX8 1338 aaKnown RBP14.75□□□□□ -0.05
Shank2-205ENSMUST00000146006 Ifnlr1Q8CGK5 535 aa14.73□□□□□ -0.05
Shank2-205ENSMUST00000146006 NrdcQ8BHG1 1161 aa14.73□□□□□ -0.05
Shank2-205ENSMUST00000146006 Zbtb7cQ8VCZ7 619 aa14.72□□□□□ -0.05
Shank2-205ENSMUST00000146006 Gm13697A2AK42 830 aa14.72□□□□□ -0.05
Shank2-205ENSMUST00000146006 Rb1cc1Q9ESK9 1588 aa14.66□□□□□ -0.06
Shank2-205ENSMUST00000146006 CenpbP27790 599 aa14.66□□□□□ -0.06
Shank2-205ENSMUST00000146006 NacadQ5SWP3 1504 aa14.64□□□□□ -0.07
Shank2-205ENSMUST00000146006 NeflP08551 543 aa14.63□□□□□ -0.07
Shank2-205ENSMUST00000146006 Hnrnpul2Q00PI9 745 aaKnown RBP14.62□□□□□ -0.07
Shank2-205ENSMUST00000146006 Brd4Q9ESU6 1400 aaKnown RBP14.6□□□□□ -0.07
Shank2-205ENSMUST00000146006 Eif5bQ05D44 1216 aaKnown RBP14.57□□□□□ -0.08
Shank2-205ENSMUST00000146006 Plppr3Q7TPB0 716 aa14.55□□□□□ -0.08
Shank2-205ENSMUST00000146006 Chic1Q8CBW7 227 aa14.55□□□□□ -0.08
Shank2-205ENSMUST00000146006 Ubl4bQ9CQ84 188 aa14.52□□□□□ -0.08
Shank2-205ENSMUST00000146006 Atp1b4Q99ME6 356 aa14.52□□□□□ -0.08
Shank2-205ENSMUST00000146006 Lmod2Q3UHZ5 550 aa14.5□□□□□ -0.09
Shank2-205ENSMUST00000146006 Cdk11bP24788 784 aaKnown RBP14.49□□□□□ -0.09
Shank2-205ENSMUST00000146006 Ttbk1Q6PCN3 1308 aa14.48□□□□□ -0.09
Shank2-205ENSMUST00000146006 Erich6D3Z6S9 713 aa14.47□□□□□ -0.09
Shank2-205ENSMUST00000146006 Ppargc1bQ8VHJ7 1014 aa14.44□□□□□ -0.1
Shank2-205ENSMUST00000146006 Gm13695A2AK44 830 aa14.44□□□□□ -0.1
Shank2-205ENSMUST00000146006 TonslQ6NZL6 1363 aa14.43□□□□□ -0.1
Shank2-205ENSMUST00000146006 Fkbp15Q6P9Q6 1216 aaKnown RBP14.39□□□□□ -0.11
Shank2-205ENSMUST00000146006 Ercc6F8VPZ5 1481 aa14.38□□□□□ -0.11
Shank2-205ENSMUST00000146006 Zbtb4Q5F293 982 aa14.37□□□□□ -0.11
Shank2-205ENSMUST00000146006 Plekhg3Q4VAC9 1341 aa14.36□□□□□ -0.11
Shank2-205ENSMUST00000146006 4930567H17RikQ3V0K5 233 aa14.35□□□□□ -0.11
Shank2-205ENSMUST00000146006 4933416C03RikQ3V063 378 aa14.33□□□□□ -0.12
Shank2-205ENSMUST00000146006 Nop58Q6DFW4 536 aaKnown RBP14.32□□□□□ -0.12
Shank2-205ENSMUST00000146006 Tnnt3Q9QZ47 272 aa14.31□□□□□ -0.12
Shank2-205ENSMUST00000146006 Prdm10Q3UTQ7 1184 aa14.28□□□□□ -0.12
Shank2-205ENSMUST00000146006 Baz1aO88379 1555 aa14.28□□□□□ -0.12
Shank2-205ENSMUST00000146006 Nlrp6Q91WS2 869 aa14.27□□□□□ -0.13
Shank2-205ENSMUST00000146006 Hdac5Q9Z2V6 1113 aa14.23□□□□□ -0.13
Shank2-205ENSMUST00000146006 Mier1Q5UAK0 511 aa14.21□□□□□ -0.13
Shank2-205ENSMUST00000146006 Kdm5dQ62240 1548 aa14.2□□□□□ -0.14
Shank2-205ENSMUST00000146006 DiexfQ8BTT6 772 aaKnown RBP14.19□□□□□ -0.14
Shank2-205ENSMUST00000146006 Safb2Q80YR5 991 aaKnown RBP14.17□□□□□ -0.14
Shank2-205ENSMUST00000146006 Polr3glQ8R0C0 218 aa14.16□□□□□ -0.14
Shank2-205ENSMUST00000146006 Dcaf1Q80TR8 1506 aa14.15□□□□□ -0.14
Shank2-205ENSMUST00000146006 Rsf1E9PWW9 1441 aaKnown RBP14.13□□□□□ -0.15
Shank2-205ENSMUST00000146006 Pcgf6Q99NA9 353 aa14.11□□□□□ -0.15
Shank2-205ENSMUST00000146006 Pds5bQ4VA53 1446 aaKnown RBP14.09□□□□□ -0.15
Shank2-205ENSMUST00000146006 Ccdc18Q640L5 1455 aa14.07□□□□□ -0.16
Shank2-205ENSMUST00000146006 Kif15Q6P9L6 1387 aa14.06□□□□□ -0.16
Shank2-205ENSMUST00000146006 Clip1Q922J3 1391 aa14.04□□□□□ -0.16
Shank2-205ENSMUST00000146006 Cep164Q5DU05 1446 aa14.01□□□□□ -0.17
Shank2-205ENSMUST00000146006 P3h3Q8CG70 732 aa14□□□□□ -0.17
Shank2-205ENSMUST00000146006 Supt5hO55201 1082 aaKnown RBP13.99□□□□□ -0.17
Shank2-205ENSMUST00000146006 Mapk8ip2Q9ERE9 830 aa13.97□□□□□ -0.17
Shank2-205ENSMUST00000146006 Eid3Q3V124 375 aa13.97□□□□□ -0.17
Shank2-205ENSMUST00000146006 Rangap1P46061 589 aaKnown RBP13.96□□□□□ -0.18
Shank2-205ENSMUST00000146006 Chic2Q9D9G3 165 aa13.91□□□□□ -0.18
Shank2-205ENSMUST00000146006 Sycp2Q9CUU3 1500 aa13.9□□□□□ -0.18
Shank2-205ENSMUST00000146006 ClspnQ80YR7 1315 aa13.9□□□□□ -0.18
Shank2-205ENSMUST00000146006 Golga3P55937 1487 aa13.88□□□□□ -0.19
Shank2-205ENSMUST00000146006 ArxO35085 564 aa13.86□□□□□ -0.19
Shank2-205ENSMUST00000146006 BlmO88700 1416 aa13.85□□□□□ -0.19
Shank2-205ENSMUST00000146006 Clstn2Q9ER65 966 aa13.84□□□□□ -0.19
Shank2-205ENSMUST00000146006 Ccer2J3QPU5 274 aa13.84□□□□□ -0.19
Shank2-205ENSMUST00000146006 MyclP10166 368 aa13.8□□□□□ -0.2
Shank2-205ENSMUST00000146006 Arhgap27A2AB59 869 aa13.79□□□□□ -0.2
Shank2-205ENSMUST00000146006 Rtl5Q5DTT4 599 aa13.78□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms