RNA–Protein interactions for RNA: ENSMUST00000145482.7

Prpf40b-212, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,308 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-212ENSMUST00000145482 NischQ80TM9 1593 aa30.52■■■□□ 2.48
Prpf40b-212ENSMUST00000145482 Gm35339A0A140LHH9 1649 aa29.81■■■□□ 2.36
Prpf40b-212ENSMUST00000145482 Abcc9P70170 1546 aa29.41■■■□□ 2.3
Prpf40b-212ENSMUST00000145482 Abcc8B2RUS7 1588 aa29.11■■■□□ 2.25
Prpf40b-212ENSMUST00000145482 Rhox8Q6VSS7 320 aa28.36■■■□□ 2.13
Prpf40b-212ENSMUST00000145482 ScribQ80U72 1612 aa27.5■■□□□ 1.99
Prpf40b-212ENSMUST00000145482 Ehmt2Q9Z148 1263 aaKnown RBP27.28■■□□□ 1.96
Prpf40b-212ENSMUST00000145482 Rpgrip1Q9EPQ2 1331 aa27.25■■□□□ 1.95
Prpf40b-212ENSMUST00000145482 Kdm5dQ62240 1548 aa26.93■■□□□ 1.9
Prpf40b-212ENSMUST00000145482 NacadQ5SWP3 1504 aa26.75■■□□□ 1.87
Prpf40b-212ENSMUST00000145482 Rb1cc1Q9ESK9 1588 aa26.67■■□□□ 1.86
Prpf40b-212ENSMUST00000145482 Dcaf1Q80TR8 1506 aa26.67■■□□□ 1.86
Prpf40b-212ENSMUST00000145482 Acin1Q9JIX8 1338 aaKnown RBP26.61■■□□□ 1.85
Prpf40b-212ENSMUST00000145482 Pcgf6Q99NA9 353 aa26.6■■□□□ 1.85
Prpf40b-212ENSMUST00000145482 Ccdc180J3QNE4 1664 aa26.43■■□□□ 1.82
Prpf40b-212ENSMUST00000145482 Ccdc136Q3TVA9 1136 aa26.42■■□□□ 1.82
Prpf40b-212ENSMUST00000145482 Rtl1Q7M732 1744 aa26.33■■□□□ 1.81
Prpf40b-212ENSMUST00000145482 Zcchc6Q5BLK4 1491 aaKnown RBP26.27■■□□□ 1.8
Prpf40b-212ENSMUST00000145482 Baz1aO88379 1555 aa26.23■■□□□ 1.79
Prpf40b-212ENSMUST00000145482 Sycp2Q9CUU3 1500 aa26.2■■□□□ 1.78
Prpf40b-212ENSMUST00000145482 Supt5hO55201 1082 aaKnown RBP25.96■■□□□ 1.75
Prpf40b-212ENSMUST00000145482 Neurod1Q60867 357 aa25.76■■□□□ 1.71
Prpf40b-212ENSMUST00000145482 BicraF8VPZ9 1578 aa25.72■■□□□ 1.71
Prpf40b-212ENSMUST00000145482 Crybg2B7ZCC2 1516 aa25.67■■□□□ 1.7
Prpf40b-212ENSMUST00000145482 Zeb1Q64318 1117 aa25.58■■□□□ 1.68
Prpf40b-212ENSMUST00000145482 Smarca2Q6DIC0 1577 aa25.52■■□□□ 1.68
Prpf40b-212ENSMUST00000145482 Cecr2E9Q2Z1 1453 aa25.51■■□□□ 1.67
Prpf40b-212ENSMUST00000145482 Trim41Q5NCC3 630 aa25.51■■□□□ 1.67
Prpf40b-212ENSMUST00000145482 HrcG5E8J6 738 aa25.47■■□□□ 1.67
Prpf40b-212ENSMUST00000145482 Las1lA2BE28 776 aaKnown RBP25.35■■□□□ 1.65
Prpf40b-212ENSMUST00000145482 Esf1Q3V1V3 845 aaKnown RBP25.29■■□□□ 1.64
Prpf40b-212ENSMUST00000145482 Cngb1E1AZ71 1325 aa25.29■■□□□ 1.64
Prpf40b-212ENSMUST00000145482 Gab3Q8BSM5 595 aa25.12■■□□□ 1.61
Prpf40b-212ENSMUST00000145482 1700123L14RikQ3V2K7 440 aa25.11■■□□□ 1.61
Prpf40b-212ENSMUST00000145482 Brd4Q9ESU6 1400 aaKnown RBP25.09■■□□□ 1.61
Prpf40b-212ENSMUST00000145482 Csrnp3P59055 597 aa25.09■■□□□ 1.61
Prpf40b-212ENSMUST00000145482 Synj1Q8CHC4 1574 aa24.96■■□□□ 1.59
Prpf40b-212ENSMUST00000145482 CftrP26361 1476 aa24.9■■□□□ 1.58
Prpf40b-212ENSMUST00000145482 Gm38655A0A286YDK6 273 aa24.89■■□□□ 1.58
Prpf40b-212ENSMUST00000145482 Smarca4Q3TKT4 1613 aaKnown RBP24.89■■□□□ 1.57
Prpf40b-212ENSMUST00000145482 Sall2Q9QX96 1004 aa24.84■■□□□ 1.57
Prpf40b-212ENSMUST00000145482 Pds5bQ4VA53 1446 aaKnown RBP24.83■■□□□ 1.57
Prpf40b-212ENSMUST00000145482 Ppargc1bQ8VHJ7 1014 aa24.81■■□□□ 1.56
Prpf40b-212ENSMUST00000145482 CenpbP27790 599 aa24.79■■□□□ 1.56
Prpf40b-212ENSMUST00000145482 Atad2bE9Q166 1460 aaKnown RBP24.79■■□□□ 1.56
Prpf40b-212ENSMUST00000145482 Chic1Q8CBW7 227 aa24.75■■□□□ 1.55
Prpf40b-212ENSMUST00000145482 Wdr66E9Q743 1299 aa24.75■■□□□ 1.55
Prpf40b-212ENSMUST00000145482 Iqgap2Q3UQ44 1575 aa24.7■■□□□ 1.55
Prpf40b-212ENSMUST00000145482 Mier1Q5UAK0 511 aa24.68■■□□□ 1.54
Prpf40b-212ENSMUST00000145482 Golga3P55937 1487 aa24.6■■□□□ 1.53
Prpf40b-212ENSMUST00000145482 Cttnbp2B9EJA2 1648 aa24.58■■□□□ 1.53
Prpf40b-212ENSMUST00000145482 Anks4bQ8K3X6 423 aa24.58■■□□□ 1.52
Prpf40b-212ENSMUST00000145482 Rsf1E9PWW9 1441 aaKnown RBP24.5■■□□□ 1.51
Prpf40b-212ENSMUST00000145482 Ccdc88bQ4QRL3 1481 aa24.48■■□□□ 1.51
Prpf40b-212ENSMUST00000145482 NefmP08553 848 aa24.47■■□□□ 1.51
Prpf40b-212ENSMUST00000145482 DiexfQ8BTT6 772 aaKnown RBP24.45■■□□□ 1.51
Prpf40b-212ENSMUST00000145482 Dnajc5bQ9CQ94 199 aa24.45■■□□□ 1.5
Prpf40b-212ENSMUST00000145482 Il27Q8K3I6 234 aa24.43■■□□□ 1.5
Prpf40b-212ENSMUST00000145482 Ercc6F8VPZ5 1481 aa24.43■■□□□ 1.5
Prpf40b-212ENSMUST00000145482 Cep164Q5DU05 1446 aa24.42■■□□□ 1.5
Prpf40b-212ENSMUST00000145482 Frmpd1A2AKB4 1549 aa24.4■■□□□ 1.5
Prpf40b-212ENSMUST00000145482 UbtfP25976 765 aaKnown RBP24.38■■□□□ 1.49
Prpf40b-212ENSMUST00000145482 Cdk11bP24788 784 aaKnown RBP24.37■■□□□ 1.49
Prpf40b-212ENSMUST00000145482 Nop58Q6DFW4 536 aaKnown RBP24.32■■□□□ 1.48
Prpf40b-212ENSMUST00000145482 Ubl4bQ9CQ84 188 aa24.31■■□□□ 1.48
Prpf40b-212ENSMUST00000145482 Aebp2Q9Z248 504 aaKnown RBP24.31■■□□□ 1.48
Prpf40b-212ENSMUST00000145482 Wdr62Q3U3T8 1523 aa24.26■■□□□ 1.47
Prpf40b-212ENSMUST00000145482 Myt1Q8CFC2 1127 aa24.25■■□□□ 1.47
Prpf40b-212ENSMUST00000145482 Aplp2Q06335 707 aa24.2■■□□□ 1.46
Prpf40b-212ENSMUST00000145482 Kif15Q6P9L6 1387 aa24.18■■□□□ 1.46
Prpf40b-212ENSMUST00000145482 Cc2d2aQ8CFW7 1633 aa24.15■■□□□ 1.46
Prpf40b-212ENSMUST00000145482 Top2bQ64511 1612 aa24.13■■□□□ 1.45
Prpf40b-212ENSMUST00000145482 Phldb1Q6PDH0 1371 aaKnown RBP24.08■■□□□ 1.45
Prpf40b-212ENSMUST00000145482 Bcl11aQ9QYE3 773 aa24.07■■□□□ 1.44
Prpf40b-212ENSMUST00000145482 Npm2Q80W85 207 aa24.05■■□□□ 1.44
Prpf40b-212ENSMUST00000145482 Mapk8ip2Q9ERE9 830 aa24.04■■□□□ 1.44
Prpf40b-212ENSMUST00000145482 Thoc2B1AZI6 1594 aaKnown RBP24.04■■□□□ 1.44
Prpf40b-212ENSMUST00000145482 Myt1lP97500 1187 aa24.03■■□□□ 1.44
Prpf40b-212ENSMUST00000145482 Fmn1Q05860 1466 aa24.01■■□□□ 1.43
Prpf40b-212ENSMUST00000145482 Npm1Q61937 292 aaKnown RBP23.94■■□□□ 1.42
Prpf40b-212ENSMUST00000145482 Fam71e1A1L3C1 212 aa23.92■■□□□ 1.42
Prpf40b-212ENSMUST00000145482 SafbD3YXK2 937 aaKnown RBP23.86■■□□□ 1.41
Prpf40b-212ENSMUST00000145482 Cux2P70298 1426 aa23.86■■□□□ 1.41
Prpf40b-212ENSMUST00000145482 Unc13aQ4KUS2 1712 aa23.82■■□□□ 1.4
Prpf40b-212ENSMUST00000145482 ClspnQ80YR7 1315 aa23.81■■□□□ 1.4
Prpf40b-212ENSMUST00000145482 Lamc3Q9R0B6 1581 aa23.71■■□□□ 1.39
Prpf40b-212ENSMUST00000145482 Ifnlr1Q8CGK5 535 aa23.71■■□□□ 1.39
Prpf40b-212ENSMUST00000145482 Fam135aQ6NS59 1506 aa23.69■■□□□ 1.38
Prpf40b-212ENSMUST00000145482 PrkcshO08795 521 aa23.69■■□□□ 1.38
Prpf40b-212ENSMUST00000145482 Top2aQ01320 1528 aaKnown RBP23.69■■□□□ 1.38
Prpf40b-212ENSMUST00000145482 Ap3b1Q9Z1T1 1105 aa23.67■■□□□ 1.38
Prpf40b-212ENSMUST00000145482 TonslQ6NZL6 1363 aa23.66■■□□□ 1.38
Prpf40b-212ENSMUST00000145482 Ccdc18Q640L5 1455 aa23.65■■□□□ 1.38
Prpf40b-212ENSMUST00000145482 Hnrnpul2Q00PI9 745 aaKnown RBP23.62■■□□□ 1.37
Prpf40b-212ENSMUST00000145482 Rapgef2Q8CHG7 1496 aa23.6■■□□□ 1.37
Prpf40b-212ENSMUST00000145482 TnnQ80Z71 1560 aa23.59■■□□□ 1.37
Prpf40b-212ENSMUST00000145482 Plekhg3Q4VAC9 1341 aa23.59■■□□□ 1.37
Prpf40b-212ENSMUST00000145482 PtprkP35822 1457 aa23.58■■□□□ 1.36
Prpf40b-212ENSMUST00000145482 Eid3Q3V124 375 aa23.56■■□□□ 1.36
Prpf40b-212ENSMUST00000145482 Camsap1A2AHC3 1581 aa23.52■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms