RNA–Protein interactions for RNA: ENSMUST00000140203.1

Gm11548-201, mousemouse

TSL 1 (best) BASIC

Gene Gm11548, Length 2,199 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11548-201ENSMUST00000140203 NischQ80TM9 1593 aa17.23■□□□□ 0.35
Gm11548-201ENSMUST00000140203 Gm35339A0A140LHH9 1649 aa17.05■□□□□ 0.32
Gm11548-201ENSMUST00000140203 Abcc9P70170 1546 aa16.82■□□□□ 0.28
Gm11548-201ENSMUST00000140203 Rtl1Q7M732 1744 aa16.46■□□□□ 0.23
Gm11548-201ENSMUST00000140203 Abcc8B2RUS7 1588 aa16.32■□□□□ 0.2
Gm11548-201ENSMUST00000140203 Ccdc180J3QNE4 1664 aa16.05■□□□□ 0.16
Gm11548-201ENSMUST00000140203 Rhox8Q6VSS7 320 aa15.9■□□□□ 0.14
Gm11548-201ENSMUST00000140203 Zcchc6Q5BLK4 1491 aaKnown RBP15.49■□□□□ 0.07
Gm11548-201ENSMUST00000140203 Rpgrip1Q9EPQ2 1331 aa15.48■□□□□ 0.07
Gm11548-201ENSMUST00000140203 Dcaf1Q80TR8 1506 aa15.44■□□□□ 0.06
Gm11548-201ENSMUST00000140203 Rb1cc1Q9ESK9 1588 aa15.15■□□□□ 0.02
Gm11548-201ENSMUST00000140203 ScribQ80U72 1612 aa15.09■□□□□ 0.01
Gm11548-201ENSMUST00000140203 HrcG5E8J6 738 aa15.06■□□□□ 0
Gm11548-201ENSMUST00000140203 Baz1aO88379 1555 aa15.01□□□□□ -0.01
Gm11548-201ENSMUST00000140203 Acin1Q9JIX8 1338 aaKnown RBP14.97□□□□□ -0.01
Gm11548-201ENSMUST00000140203 Kdm5dQ62240 1548 aa14.86□□□□□ -0.03
Gm11548-201ENSMUST00000140203 Crybg2B7ZCC2 1516 aa14.77□□□□□ -0.04
Gm11548-201ENSMUST00000140203 NacadQ5SWP3 1504 aa14.77□□□□□ -0.04
Gm11548-201ENSMUST00000140203 Smarca2Q6DIC0 1577 aa14.69□□□□□ -0.06
Gm11548-201ENSMUST00000140203 Ccdc136Q3TVA9 1136 aa14.63□□□□□ -0.07
Gm11548-201ENSMUST00000140203 Cep164Q5DU05 1446 aa14.61□□□□□ -0.07
Gm11548-201ENSMUST00000140203 Trim41Q5NCC3 630 aa14.56□□□□□ -0.08
Gm11548-201ENSMUST00000140203 Ehmt2Q9Z148 1263 aaKnown RBP14.42□□□□□ -0.1
Gm11548-201ENSMUST00000140203 Sycp2Q9CUU3 1500 aa14.41□□□□□ -0.1
Gm11548-201ENSMUST00000140203 Brd4Q9ESU6 1400 aaKnown RBP14.33□□□□□ -0.12
Gm11548-201ENSMUST00000140203 Pcgf6Q99NA9 353 aa14.31□□□□□ -0.12
Gm11548-201ENSMUST00000140203 Golga3P55937 1487 aa14.2□□□□□ -0.14
Gm11548-201ENSMUST00000140203 Rsf1E9PWW9 1441 aaKnown RBP14.19□□□□□ -0.14
Gm11548-201ENSMUST00000140203 Synj1Q8CHC4 1574 aa14.11□□□□□ -0.15
Gm11548-201ENSMUST00000140203 Top2bQ64511 1612 aa14.1□□□□□ -0.15
Gm11548-201ENSMUST00000140203 NefmP08553 848 aa14.07□□□□□ -0.16
Gm11548-201ENSMUST00000140203 Cngb1E1AZ71 1325 aa14.07□□□□□ -0.16
Gm11548-201ENSMUST00000140203 Cecr2E9Q2Z1 1453 aa14.06□□□□□ -0.16
Gm11548-201ENSMUST00000140203 Cttnbp2B9EJA2 1648 aa14.06□□□□□ -0.16
Gm11548-201ENSMUST00000140203 Ccdc88bQ4QRL3 1481 aa14.04□□□□□ -0.16
Gm11548-201ENSMUST00000140203 Chic1Q8CBW7 227 aa14.02□□□□□ -0.17
Gm11548-201ENSMUST00000140203 BicraF8VPZ9 1578 aa14.01□□□□□ -0.17
Gm11548-201ENSMUST00000140203 CftrP26361 1476 aa14.01□□□□□ -0.17
Gm11548-201ENSMUST00000140203 Supt5hO55201 1082 aaKnown RBP13.98□□□□□ -0.17
Gm11548-201ENSMUST00000140203 Gab3Q8BSM5 595 aa13.9□□□□□ -0.18
Gm11548-201ENSMUST00000140203 Smarca4Q3TKT4 1613 aaKnown RBP13.88□□□□□ -0.19
Gm11548-201ENSMUST00000140203 Cc2d2aQ8CFW7 1633 aa13.88□□□□□ -0.19
Gm11548-201ENSMUST00000140203 Fmn1Q05860 1466 aa13.84□□□□□ -0.19
Gm11548-201ENSMUST00000140203 Rapgef2Q8CHG7 1496 aa13.84□□□□□ -0.19
Gm11548-201ENSMUST00000140203 Mier1Q5UAK0 511 aa13.83□□□□□ -0.2
Gm11548-201ENSMUST00000140203 Top2aQ01320 1528 aaKnown RBP13.82□□□□□ -0.2
Gm11548-201ENSMUST00000140203 Esf1Q3V1V3 845 aaKnown RBP13.79□□□□□ -0.2
Gm11548-201ENSMUST00000140203 Zeb1Q64318 1117 aa13.75□□□□□ -0.21
Gm11548-201ENSMUST00000140203 Las1lA2BE28 776 aaKnown RBP13.74□□□□□ -0.21
Gm11548-201ENSMUST00000140203 Neurod1Q60867 357 aa13.68□□□□□ -0.22
Gm11548-201ENSMUST00000140203 Cep162Q6ZQ06 1403 aa13.66□□□□□ -0.22
Gm11548-201ENSMUST00000140203 Eif4g1Q6NZJ6 1600 aaKnown RBP13.65□□□□□ -0.22
Gm11548-201ENSMUST00000140203 Iqgap2Q3UQ44 1575 aa13.64□□□□□ -0.23
Gm11548-201ENSMUST00000140203 Sall2Q9QX96 1004 aa13.61□□□□□ -0.23
Gm11548-201ENSMUST00000140203 TnnQ80Z71 1560 aa13.6□□□□□ -0.23
Gm11548-201ENSMUST00000140203 Anks4bQ8K3X6 423 aa13.54□□□□□ -0.24
Gm11548-201ENSMUST00000140203 ClspnQ80YR7 1315 aa13.53□□□□□ -0.24
Gm11548-201ENSMUST00000140203 UbtfP25976 765 aaKnown RBP13.52□□□□□ -0.24
Gm11548-201ENSMUST00000140203 Atad2bE9Q166 1460 aaKnown RBP13.51□□□□□ -0.25
Gm11548-201ENSMUST00000140203 Ncapd3Q6ZQK0 1506 aa13.46□□□□□ -0.25
Gm11548-201ENSMUST00000140203 Clip1Q922J3 1391 aa13.45□□□□□ -0.26
Gm11548-201ENSMUST00000140203 Ccdc18Q640L5 1455 aa13.44□□□□□ -0.26
Gm11548-201ENSMUST00000140203 Wdr66E9Q743 1299 aa13.44□□□□□ -0.26
Gm11548-201ENSMUST00000140203 TonslQ6NZL6 1363 aa13.43□□□□□ -0.26
Gm11548-201ENSMUST00000140203 NrkQ9R0G8 1455 aa13.42□□□□□ -0.26
Gm11548-201ENSMUST00000140203 Npm2Q80W85 207 aa13.42□□□□□ -0.26
Gm11548-201ENSMUST00000140203 Pds5bQ4VA53 1446 aaKnown RBP13.42□□□□□ -0.26
Gm11548-201ENSMUST00000140203 Map3k1P53349 1493 aa13.4□□□□□ -0.26
Gm11548-201ENSMUST00000140203 Cdk11bP24788 784 aaKnown RBP13.39□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Lamc3Q9R0B6 1581 aa13.39□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Myt1lP97500 1187 aa13.39□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Arhgap35Q91YM2 1499 aa13.38□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Eea1Q8BL66 1411 aa13.36□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Nop58Q6DFW4 536 aaKnown RBP13.35□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Aebp2Q9Z248 504 aaKnown RBP13.35□□□□□ -0.27
Gm11548-201ENSMUST00000140203 TchhA0A0B4J1F9 1599 aa13.34□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Arhgef5E9Q7D5 1581 aa13.34□□□□□ -0.27
Gm11548-201ENSMUST00000140203 Wdr62Q3U3T8 1523 aa13.33□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Shroom4Q1W617 1475 aa13.32□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Erich3F6QRE9 1637 aa13.32□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Arap1Q4LDD4 1452 aa13.3□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Camsap1A2AHC3 1581 aa13.3□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Tiam1Q60610 1591 aa13.28□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Kdm5bQ80Y84 1544 aa13.28□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Aplp2Q06335 707 aa13.27□□□□□ -0.28
Gm11548-201ENSMUST00000140203 Frmpd1A2AKB4 1549 aa13.26□□□□□ -0.29
Gm11548-201ENSMUST00000140203 Plekhg3Q4VAC9 1341 aa13.26□□□□□ -0.29
Gm11548-201ENSMUST00000140203 AqrQ8CFQ3 1481 aaKnown RBP13.25□□□□□ -0.29
Gm11548-201ENSMUST00000140203 Unc13aQ4KUS2 1712 aa13.24□□□□□ -0.29
Gm11548-201ENSMUST00000140203 PtprkP35822 1457 aa13.23□□□□□ -0.29
Gm11548-201ENSMUST00000140203 Myt1Q8CFC2 1127 aa13.22□□□□□ -0.29
Gm11548-201ENSMUST00000140203 1700123L14RikQ3V2K7 440 aa13.22□□□□□ -0.29
Gm11548-201ENSMUST00000140203 Ercc6F8VPZ5 1481 aa13.21□□□□□ -0.29
Gm11548-201ENSMUST00000140203 Setd5Q5XJV7 1441 aa13.21□□□□□ -0.3
Gm11548-201ENSMUST00000140203 Csrnp3P59055 597 aa13.2□□□□□ -0.3
Gm11548-201ENSMUST00000140203 Baz1bQ9Z277 1479 aa13.18□□□□□ -0.3
Gm11548-201ENSMUST00000140203 Grin2bQ01097 1482 aa13.17□□□□□ -0.3
Gm11548-201ENSMUST00000140203 Mroh2bQ7M6Y6 1581 aa13.17□□□□□ -0.3
Gm11548-201ENSMUST00000140203 Ankrd26Q811D2 1581 aa13.17□□□□□ -0.3
Gm11548-201ENSMUST00000140203 CenpbP27790 599 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms