RNA–Protein interactions for RNA: ENSMUST00000138460.7

5530601H04Rik-207, mousemouse

TSL 1 (best) BASIC

Gene 5530601H04Rik, Length 3,732 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
5530601H04Rik-207ENSMUST00000138460 Chic1Q8CBW7 227 aa13.61□□□□□ -0.23
5530601H04Rik-207ENSMUST00000138460 Gm35339A0A140LHH9 1649 aa13.42□□□□□ -0.26
5530601H04Rik-207ENSMUST00000138460 Plppr3Q7TPB0 716 aa12.75□□□□□ -0.37
5530601H04Rik-207ENSMUST00000138460 Mapk8ip2Q9ERE9 830 aa12.59□□□□□ -0.39
5530601H04Rik-207ENSMUST00000138460 Phf23Q8BSN5 401 aa12.51□□□□□ -0.41
5530601H04Rik-207ENSMUST00000138460 Kcna4Q61423 654 aa12.36□□□□□ -0.43
5530601H04Rik-207ENSMUST00000138460 Gab3Q8BSM5 595 aa12.22□□□□□ -0.45
5530601H04Rik-207ENSMUST00000138460 Ccdc180J3QNE4 1664 aa12.15□□□□□ -0.46
5530601H04Rik-207ENSMUST00000138460 Ube2uB1AUC4 352 aa11.81□□□□□ -0.52
5530601H04Rik-207ENSMUST00000138460 Ppargc1bQ8VHJ7 1014 aa11.8□□□□□ -0.52
5530601H04Rik-207ENSMUST00000138460 Abcc9P70170 1546 aa11.75□□□□□ -0.53
5530601H04Rik-207ENSMUST00000138460 Senp3Q9EP97 568 aaKnown RBP11.73□□□□□ -0.53
5530601H04Rik-207ENSMUST00000138460 Rtl1Q7M732 1744 aa11.61□□□□□ -0.55
5530601H04Rik-207ENSMUST00000138460 Dcaf1Q80TR8 1506 aa11.48□□□□□ -0.57
5530601H04Rik-207ENSMUST00000138460 NischQ80TM9 1593 aa11.31□□□□□ -0.6
5530601H04Rik-207ENSMUST00000138460 Abcc8B2RUS7 1588 aa11.3□□□□□ -0.6
5530601H04Rik-207ENSMUST00000138460 Ehmt2Q9Z148 1263 aaKnown RBP11.21□□□□□ -0.62
5530601H04Rik-207ENSMUST00000138460 Slc4a1apE9PX68 744 aa10.89□□□□□ -0.67
5530601H04Rik-207ENSMUST00000138460 Dmrt2Q8BG36 561 aa10.89□□□□□ -0.67
5530601H04Rik-207ENSMUST00000138460 ScribQ80U72 1612 aa10.87□□□□□ -0.67
5530601H04Rik-207ENSMUST00000138460 Crybg2B7ZCC2 1516 aa10.82□□□□□ -0.68
5530601H04Rik-207ENSMUST00000138460 Fam71e1A1L3C1 212 aa10.63□□□□□ -0.71
5530601H04Rik-207ENSMUST00000138460 Trap1aP19473 224 aa10.57□□□□□ -0.72
5530601H04Rik-207ENSMUST00000138460 Gpatch8A2A6A1 1505 aa10.53□□□□□ -0.72
5530601H04Rik-207ENSMUST00000138460 Smarca2Q6DIC0 1577 aa10.5□□□□□ -0.73
5530601H04Rik-207ENSMUST00000138460 Zcchc6Q5BLK4 1491 aaKnown RBP10.45□□□□□ -0.74
5530601H04Rik-207ENSMUST00000138460 1700123L14RikQ3V2K7 440 aa10.34□□□□□ -0.75
5530601H04Rik-207ENSMUST00000138460 AcrbpQ3V140 540 aa10.3□□□□□ -0.76
5530601H04Rik-207ENSMUST00000138460 Atf5O70191 283 aa10.28□□□□□ -0.76
5530601H04Rik-207ENSMUST00000138460 Prdm10Q3UTQ7 1184 aa10.21□□□□□ -0.77
5530601H04Rik-207ENSMUST00000138460 Ppp4r2Q0VGB7 417 aa10.19□□□□□ -0.78
5530601H04Rik-207ENSMUST00000138460 Baz1aO88379 1555 aa10.15□□□□□ -0.78
5530601H04Rik-207ENSMUST00000138460 Tshz2Q68FE9 1030 aa10.14□□□□□ -0.79
5530601H04Rik-207ENSMUST00000138460 Nlrp6Q91WS2 869 aa10.14□□□□□ -0.79
5530601H04Rik-207ENSMUST00000138460 Pde4cQ3UEI1 686 aa10.11□□□□□ -0.79
5530601H04Rik-207ENSMUST00000138460 Kdm5dQ62240 1548 aa10.04□□□□□ -0.8
5530601H04Rik-207ENSMUST00000138460 Ecm2Q5FW85 670 aa10.02□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 Sycp2Q9CUU3 1500 aa10.02□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 Prm3Q62100 101 aa10□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 NacadQ5SWP3 1504 aa10□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 Baz1bQ9Z277 1479 aa9.99□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 Rtn4Q99P72 1162 aaKnown RBP9.97□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 Top2bQ64511 1612 aa9.97□□□□□ -0.81
5530601H04Rik-207ENSMUST00000138460 BicraF8VPZ9 1578 aa9.95□□□□□ -0.82
5530601H04Rik-207ENSMUST00000138460 Arid3aQ62431 601 aa9.95□□□□□ -0.82
5530601H04Rik-207ENSMUST00000138460 Eif4g1Q6NZJ6 1600 aaKnown RBP9.94□□□□□ -0.82
5530601H04Rik-207ENSMUST00000138460 Cdca7Q9D0M2 382 aa9.94□□□□□ -0.82
5530601H04Rik-207ENSMUST00000138460 TnnQ80Z71 1560 aa9.91□□□□□ -0.82
5530601H04Rik-207ENSMUST00000138460 Npm2Q80W85 207 aa9.9□□□□□ -0.82
5530601H04Rik-207ENSMUST00000138460 Rb1cc1Q9ESK9 1588 aa9.9□□□□□ -0.83
5530601H04Rik-207ENSMUST00000138460 Hs6st3Q9QYK4 470 aa9.87□□□□□ -0.83
5530601H04Rik-207ENSMUST00000138460 Unc13aQ4KUS2 1712 aa9.86□□□□□ -0.83
5530601H04Rik-207ENSMUST00000138460 Chrna2Q91X60 512 aa9.84□□□□□ -0.83
5530601H04Rik-207ENSMUST00000138460 Hoxd11P23813 323 aa9.83□□□□□ -0.84
5530601H04Rik-207ENSMUST00000138460 Rsph4aQ8BYM7 716 aa9.74□□□□□ -0.85
5530601H04Rik-207ENSMUST00000138460 Taok2Q6ZQ29 1240 aa9.68□□□□□ -0.86
5530601H04Rik-207ENSMUST00000138460 Prdm16A2A935 1275 aa9.67□□□□□ -0.86
5530601H04Rik-207ENSMUST00000138460 Cttnbp2B9EJA2 1648 aa9.65□□□□□ -0.87
5530601H04Rik-207ENSMUST00000138460 SynmQ70IV5 1561 aa9.63□□□□□ -0.87
5530601H04Rik-207ENSMUST00000138460 Styxl1Q9DAR2 321 aa9.62□□□□□ -0.87
5530601H04Rik-207ENSMUST00000138460 Kif21aQ9QXL2 1672 aa9.6□□□□□ -0.87
5530601H04Rik-207ENSMUST00000138460 MyclP10166 368 aa9.59□□□□□ -0.87
5530601H04Rik-207ENSMUST00000138460 Bach1P97302 739 aa9.58□□□□□ -0.88
5530601H04Rik-207ENSMUST00000138460 Thoc2B1AZI6 1594 aaKnown RBP9.53□□□□□ -0.88
5530601H04Rik-207ENSMUST00000138460 Riok3Q9DBU3 519 aaKnown RBP9.53□□□□□ -0.88
5530601H04Rik-207ENSMUST00000138460 Rimbp2Q80U40 1072 aa9.51□□□□□ -0.89
5530601H04Rik-207ENSMUST00000138460 Pprc1Q6NZN1 1644 aa9.5□□□□□ -0.89
5530601H04Rik-207ENSMUST00000138460 Esf1Q3V1V3 845 aaKnown RBP9.46□□□□□ -0.89
5530601H04Rik-207ENSMUST00000138460 Skap1Q3UUV5 355 aa9.44□□□□□ -0.9
5530601H04Rik-207ENSMUST00000138460 WdpcpQ8C456 722 aa9.42□□□□□ -0.9
5530601H04Rik-207ENSMUST00000138460 Znf219Q6IQX8 726 aa9.41□□□□□ -0.9
5530601H04Rik-207ENSMUST00000138460 Erich3F6QRE9 1637 aa9.39□□□□□ -0.91
5530601H04Rik-207ENSMUST00000138460 Smarca4Q3TKT4 1613 aaKnown RBP9.39□□□□□ -0.91
5530601H04Rik-207ENSMUST00000138460 Ttbk1Q6PCN3 1308 aa9.38□□□□□ -0.91
5530601H04Rik-207ENSMUST00000138460 CatipB9EKE5 520 aa9.35□□□□□ -0.91
5530601H04Rik-207ENSMUST00000138460 Ms4a5Q810P8 197 aa9.33□□□□□ -0.92
5530601H04Rik-207ENSMUST00000138460 Peg3Q3URU2 1571 aa9.32□□□□□ -0.92
5530601H04Rik-207ENSMUST00000138460 Lamc3Q9R0B6 1581 aa9.31□□□□□ -0.92
5530601H04Rik-207ENSMUST00000138460 Kif21bQ9QXL1 1668 aa9.3□□□□□ -0.92
5530601H04Rik-207ENSMUST00000138460 ArxO35085 564 aa9.28□□□□□ -0.92
5530601H04Rik-207ENSMUST00000138460 Fam135aQ6NS59 1506 aa9.27□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 TchhA0A0B4J1F9 1599 aa9.27□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 Fhod3Q76LL6 1578 aa9.25□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 Dnajc5bQ9CQ94 199 aa9.25□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 Fam163aQ8CAA5 168 aa9.22□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 Top2aQ01320 1528 aaKnown RBP9.21□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 Tcf3P15806 651 aa9.21□□□□□ -0.93
5530601H04Rik-207ENSMUST00000138460 Wdr62Q3U3T8 1523 aa9.21□□□□□ -0.94
5530601H04Rik-207ENSMUST00000138460 Pbrm1Q8BSQ9 1634 aaKnown RBP9.21□□□□□ -0.94
5530601H04Rik-207ENSMUST00000138460 Cfap65Q3V0B4 1847 aa9.19□□□□□ -0.94
5530601H04Rik-207ENSMUST00000138460 Synj1Q8CHC4 1574 aa9.18□□□□□ -0.94
5530601H04Rik-207ENSMUST00000138460 ArsiQ32KI9 573 aa9.15□□□□□ -0.94
5530601H04Rik-207ENSMUST00000138460 C1qtnf12Q8R2Z0 308 aa9.15□□□□□ -0.94
5530601H04Rik-207ENSMUST00000138460 Lmo7E9PYF4 1699 aaKnown RBP9.11□□□□□ -0.95
5530601H04Rik-207ENSMUST00000138460 MpndQ3TV65 487 aa9.1□□□□□ -0.95
5530601H04Rik-207ENSMUST00000138460 Vsig10D3YX43 558 aa9.08□□□□□ -0.96
5530601H04Rik-207ENSMUST00000138460 Iqgap2Q3UQ44 1575 aa9.08□□□□□ -0.96
5530601H04Rik-207ENSMUST00000138460 Cul7Q8VE73 1689 aa9.07□□□□□ -0.96
5530601H04Rik-207ENSMUST00000138460 Cc2d2aQ8CFW7 1633 aa9.07□□□□□ -0.96
5530601H04Rik-207ENSMUST00000138460 Ppp6r1Q7TSI3 856 aa9.06□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 7.4 ms