RNA–Protein interactions for RNA: ENSMUST00000125533.8

Smim1-201, Transcript of Small integral membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smim1, Length 2,568 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1-201ENSMUST00000125533 NischQ80TM9 1593 aa27.92■■■□□ 2.06
Smim1-201ENSMUST00000125533 Gm35339A0A140LHH9 1649 aa27.62■■■□□ 2.01
Smim1-201ENSMUST00000125533 Abcc9P70170 1546 aa27.14■■□□□ 1.94
Smim1-201ENSMUST00000125533 Abcc8B2RUS7 1588 aa26.56■■□□□ 1.84
Smim1-201ENSMUST00000125533 Rhox8Q6VSS7 320 aa25.57■■□□□ 1.68
Smim1-201ENSMUST00000125533 Rtl1Q7M732 1744 aa25.48■■□□□ 1.67
Smim1-201ENSMUST00000125533 Ccdc180J3QNE4 1664 aa24.91■■□□□ 1.58
Smim1-201ENSMUST00000125533 Dcaf1Q80TR8 1506 aa24.9■■□□□ 1.58
Smim1-201ENSMUST00000125533 ScribQ80U72 1612 aa24.76■■□□□ 1.55
Smim1-201ENSMUST00000125533 Rpgrip1Q9EPQ2 1331 aa24.55■■□□□ 1.52
Smim1-201ENSMUST00000125533 Rb1cc1Q9ESK9 1588 aa24.45■■□□□ 1.5
Smim1-201ENSMUST00000125533 Zcchc6Q5BLK4 1491 aaKnown RBP24.41■■□□□ 1.5
Smim1-201ENSMUST00000125533 Kdm5dQ62240 1548 aa24.29■■□□□ 1.48
Smim1-201ENSMUST00000125533 Baz1aO88379 1555 aa24.21■■□□□ 1.47
Smim1-201ENSMUST00000125533 NacadQ5SWP3 1504 aa24.18■■□□□ 1.46
Smim1-201ENSMUST00000125533 Crybg2B7ZCC2 1516 aa23.91■■□□□ 1.42
Smim1-201ENSMUST00000125533 Acin1Q9JIX8 1338 aaKnown RBP23.9■■□□□ 1.42
Smim1-201ENSMUST00000125533 HrcG5E8J6 738 aa23.72■■□□□ 1.39
Smim1-201ENSMUST00000125533 Ccdc136Q3TVA9 1136 aa23.7■■□□□ 1.38
Smim1-201ENSMUST00000125533 Smarca2Q6DIC0 1577 aa23.65■■□□□ 1.38
Smim1-201ENSMUST00000125533 Sycp2Q9CUU3 1500 aa23.64■■□□□ 1.37
Smim1-201ENSMUST00000125533 Ehmt2Q9Z148 1263 aaKnown RBP23.5■■□□□ 1.35
Smim1-201ENSMUST00000125533 Trim41Q5NCC3 630 aa23.42■■□□□ 1.34
Smim1-201ENSMUST00000125533 Pcgf6Q99NA9 353 aa23.34■■□□□ 1.33
Smim1-201ENSMUST00000125533 Brd4Q9ESU6 1400 aaKnown RBP23.09■■□□□ 1.29
Smim1-201ENSMUST00000125533 BicraF8VPZ9 1578 aa23.07■■□□□ 1.28
Smim1-201ENSMUST00000125533 Cep164Q5DU05 1446 aa23.03■■□□□ 1.28
Smim1-201ENSMUST00000125533 Cecr2E9Q2Z1 1453 aa22.98■■□□□ 1.27
Smim1-201ENSMUST00000125533 Synj1Q8CHC4 1574 aa22.82■■□□□ 1.24
Smim1-201ENSMUST00000125533 Golga3P55937 1487 aa22.78■■□□□ 1.24
Smim1-201ENSMUST00000125533 Supt5hO55201 1082 aaKnown RBP22.76■■□□□ 1.23
Smim1-201ENSMUST00000125533 CftrP26361 1476 aa22.73■■□□□ 1.23
Smim1-201ENSMUST00000125533 Cngb1E1AZ71 1325 aa22.7■■□□□ 1.22
Smim1-201ENSMUST00000125533 Rsf1E9PWW9 1441 aaKnown RBP22.68■■□□□ 1.22
Smim1-201ENSMUST00000125533 Cttnbp2B9EJA2 1648 aa22.67■■□□□ 1.22
Smim1-201ENSMUST00000125533 Smarca4Q3TKT4 1613 aaKnown RBP22.61■■□□□ 1.21
Smim1-201ENSMUST00000125533 Chic1Q8CBW7 227 aa22.57■■□□□ 1.2
Smim1-201ENSMUST00000125533 Top2bQ64511 1612 aa22.56■■□□□ 1.2
Smim1-201ENSMUST00000125533 Ccdc88bQ4QRL3 1481 aa22.53■■□□□ 1.2
Smim1-201ENSMUST00000125533 Esf1Q3V1V3 845 aaKnown RBP22.48■■□□□ 1.19
Smim1-201ENSMUST00000125533 Neurod1Q60867 357 aa22.47■■□□□ 1.19
Smim1-201ENSMUST00000125533 Gab3Q8BSM5 595 aa22.31■■□□□ 1.16
Smim1-201ENSMUST00000125533 Iqgap2Q3UQ44 1575 aa22.28■■□□□ 1.16
Smim1-201ENSMUST00000125533 Cc2d2aQ8CFW7 1633 aa22.26■■□□□ 1.15
Smim1-201ENSMUST00000125533 Fmn1Q05860 1466 aa22.24■■□□□ 1.15
Smim1-201ENSMUST00000125533 Zeb1Q64318 1117 aa22.23■■□□□ 1.15
Smim1-201ENSMUST00000125533 Atad2bE9Q166 1460 aaKnown RBP22.23■■□□□ 1.15
Smim1-201ENSMUST00000125533 Las1lA2BE28 776 aaKnown RBP22.16■■□□□ 1.14
Smim1-201ENSMUST00000125533 Pds5bQ4VA53 1446 aaKnown RBP22.15■■□□□ 1.14
Smim1-201ENSMUST00000125533 NefmP08553 848 aa22.12■■□□□ 1.13
Smim1-201ENSMUST00000125533 Top2aQ01320 1528 aaKnown RBP22.1■■□□□ 1.13
Smim1-201ENSMUST00000125533 Rapgef2Q8CHG7 1496 aa22.04■■□□□ 1.12
Smim1-201ENSMUST00000125533 Sall2Q9QX96 1004 aa21.99■■□□□ 1.11
Smim1-201ENSMUST00000125533 Mier1Q5UAK0 511 aa21.98■■□□□ 1.11
Smim1-201ENSMUST00000125533 TnnQ80Z71 1560 aa21.91■■□□□ 1.1
Smim1-201ENSMUST00000125533 Wdr62Q3U3T8 1523 aa21.86■■□□□ 1.09
Smim1-201ENSMUST00000125533 Anks4bQ8K3X6 423 aa21.86■■□□□ 1.09
Smim1-201ENSMUST00000125533 Frmpd1A2AKB4 1549 aa21.84■■□□□ 1.09
Smim1-201ENSMUST00000125533 Cep162Q6ZQ06 1403 aa21.83■■□□□ 1.09
Smim1-201ENSMUST00000125533 1700123L14RikQ3V2K7 440 aa21.83■■□□□ 1.08
Smim1-201ENSMUST00000125533 Csrnp3P59055 597 aa21.74■■□□□ 1.07
Smim1-201ENSMUST00000125533 Lamc3Q9R0B6 1581 aa21.73■■□□□ 1.07
Smim1-201ENSMUST00000125533 Ercc6F8VPZ5 1481 aa21.72■■□□□ 1.07
Smim1-201ENSMUST00000125533 Eif4g1Q6NZJ6 1600 aaKnown RBP21.71■■□□□ 1.07
Smim1-201ENSMUST00000125533 Npm2Q80W85 207 aa21.64■■□□□ 1.06
Smim1-201ENSMUST00000125533 Unc13aQ4KUS2 1712 aa21.6■■□□□ 1.05
Smim1-201ENSMUST00000125533 Wdr66E9Q743 1299 aa21.57■■□□□ 1.04
Smim1-201ENSMUST00000125533 Myt1lP97500 1187 aa21.57■■□□□ 1.04
Smim1-201ENSMUST00000125533 Kif15Q6P9L6 1387 aa21.55■■□□□ 1.04
Smim1-201ENSMUST00000125533 NrkQ9R0G8 1455 aa21.55■■□□□ 1.04
Smim1-201ENSMUST00000125533 Aebp2Q9Z248 504 aaKnown RBP21.53■■□□□ 1.04
Smim1-201ENSMUST00000125533 Camsap1A2AHC3 1581 aa21.51■■□□□ 1.03
Smim1-201ENSMUST00000125533 Cdk11bP24788 784 aaKnown RBP21.5■■□□□ 1.03
Smim1-201ENSMUST00000125533 Arhgap35Q91YM2 1499 aa21.49■■□□□ 1.03
Smim1-201ENSMUST00000125533 Clip1Q922J3 1391 aa21.46■■□□□ 1.03
Smim1-201ENSMUST00000125533 Aplp2Q06335 707 aa21.45■■□□□ 1.03
Smim1-201ENSMUST00000125533 Shroom4Q1W617 1475 aa21.45■■□□□ 1.02
Smim1-201ENSMUST00000125533 UbtfP25976 765 aaKnown RBP21.45■■□□□ 1.02
Smim1-201ENSMUST00000125533 Nop58Q6DFW4 536 aaKnown RBP21.45■■□□□ 1.02
Smim1-201ENSMUST00000125533 PtprkP35822 1457 aa21.44■■□□□ 1.02
Smim1-201ENSMUST00000125533 ClspnQ80YR7 1315 aa21.44■■□□□ 1.02
Smim1-201ENSMUST00000125533 Ccdc18Q640L5 1455 aa21.43■■□□□ 1.02
Smim1-201ENSMUST00000125533 Map3k1P53349 1493 aa21.41■■□□□ 1.02
Smim1-201ENSMUST00000125533 CenpbP27790 599 aa21.4■■□□□ 1.02
Smim1-201ENSMUST00000125533 Phldb1Q6PDH0 1371 aaKnown RBP21.4■■□□□ 1.02
Smim1-201ENSMUST00000125533 Thoc2B1AZI6 1594 aaKnown RBP21.39■■□□□ 1.02
Smim1-201ENSMUST00000125533 Myt1Q8CFC2 1127 aa21.39■■□□□ 1.01
Smim1-201ENSMUST00000125533 Grin2bQ01097 1482 aa21.36■■□□□ 1.01
Smim1-201ENSMUST00000125533 Il27Q8K3I6 234 aa21.34■■□□□ 1.01
Smim1-201ENSMUST00000125533 Eea1Q8BL66 1411 aa21.33■■□□□ 1.01
Smim1-201ENSMUST00000125533 Ppargc1bQ8VHJ7 1014 aa21.28■■□□□ 1
Smim1-201ENSMUST00000125533 Mroh2bQ7M6Y6 1581 aa21.24■□□□□ 0.99
Smim1-201ENSMUST00000125533 Arap1Q4LDD4 1452 aa21.22■□□□□ 0.99
Smim1-201ENSMUST00000125533 Arhgef5E9Q7D5 1581 aa21.21■□□□□ 0.99
Smim1-201ENSMUST00000125533 Cux2P70298 1426 aa21.21■□□□□ 0.99
Smim1-201ENSMUST00000125533 Fam135aQ6NS59 1506 aa21.2■□□□□ 0.98
Smim1-201ENSMUST00000125533 Plekhg3Q4VAC9 1341 aa21.2■□□□□ 0.98
Smim1-201ENSMUST00000125533 AqrQ8CFQ3 1481 aaKnown RBP21.2■□□□□ 0.98
Smim1-201ENSMUST00000125533 Setd5Q5XJV7 1441 aa21.19■□□□□ 0.98
Smim1-201ENSMUST00000125533 Ncapd3Q6ZQK0 1506 aa21.18■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms