RNA–Protein interactions for RNA: ENSMUST00000115027.7

Cald1-205, Transcript of Caldesmon 1, mousemouse

TSL 5 BASIC

Gene Cald1, Length 4,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cald1-205ENSMUST00000115027 Rhox8Q6VSS7 320 aa21.55■■□□□ 1.04
Cald1-205ENSMUST00000115027 NischQ80TM9 1593 aa20.2■□□□□ 0.82
Cald1-205ENSMUST00000115027 Esf1Q3V1V3 845 aaKnown RBP19.3■□□□□ 0.68
Cald1-205ENSMUST00000115027 Trim41Q5NCC3 630 aa19.25■□□□□ 0.67
Cald1-205ENSMUST00000115027 Ccdc136Q3TVA9 1136 aa19.21■□□□□ 0.67
Cald1-205ENSMUST00000115027 Cngb1E1AZ71 1325 aa19.03■□□□□ 0.64
Cald1-205ENSMUST00000115027 Abcc9P70170 1546 aa18.99■□□□□ 0.63
Cald1-205ENSMUST00000115027 Rpgrip1Q9EPQ2 1331 aa18.76■□□□□ 0.59
Cald1-205ENSMUST00000115027 Zeb1Q64318 1117 aa18.71■□□□□ 0.59
Cald1-205ENSMUST00000115027 Abcc8B2RUS7 1588 aa18.67■□□□□ 0.58
Cald1-205ENSMUST00000115027 Npm2Q80W85 207 aa18.65■□□□□ 0.58
Cald1-205ENSMUST00000115027 Gab3Q8BSM5 595 aa18.48■□□□□ 0.55
Cald1-205ENSMUST00000115027 Zcchc6Q5BLK4 1491 aaKnown RBP18.43■□□□□ 0.54
Cald1-205ENSMUST00000115027 Gm35339A0A140LHH9 1649 aa18.34■□□□□ 0.53
Cald1-205ENSMUST00000115027 Rtl1Q7M732 1744 aa18.29■□□□□ 0.52
Cald1-205ENSMUST00000115027 Myt1lP97500 1187 aa18.29■□□□□ 0.52
Cald1-205ENSMUST00000115027 Ccdc180J3QNE4 1664 aa18.26■□□□□ 0.51
Cald1-205ENSMUST00000115027 Ube2uB1AUC4 352 aa18.23■□□□□ 0.51
Cald1-205ENSMUST00000115027 HrcG5E8J6 738 aa18.23■□□□□ 0.51
Cald1-205ENSMUST00000115027 Ehmt2Q9Z148 1263 aaKnown RBP18.18■□□□□ 0.5
Cald1-205ENSMUST00000115027 Las1lA2BE28 776 aaKnown RBP18.15■□□□□ 0.5
Cald1-205ENSMUST00000115027 Il27Q8K3I6 234 aa18.1■□□□□ 0.49
Cald1-205ENSMUST00000115027 NacadQ5SWP3 1504 aa17.85■□□□□ 0.45
Cald1-205ENSMUST00000115027 Npm1Q61937 292 aaKnown RBP17.84■□□□□ 0.45
Cald1-205ENSMUST00000115027 Brd4Q9ESU6 1400 aaKnown RBP17.8■□□□□ 0.44
Cald1-205ENSMUST00000115027 Wdr66E9Q743 1299 aa17.79■□□□□ 0.44
Cald1-205ENSMUST00000115027 NefmP08553 848 aa17.72■□□□□ 0.43
Cald1-205ENSMUST00000115027 Rb1cc1Q9ESK9 1588 aa17.71■□□□□ 0.43
Cald1-205ENSMUST00000115027 UbtfP25976 765 aaKnown RBP17.68■□□□□ 0.42
Cald1-205ENSMUST00000115027 Dcaf1Q80TR8 1506 aa17.48■□□□□ 0.39
Cald1-205ENSMUST00000115027 Acin1Q9JIX8 1338 aaKnown RBP17.48■□□□□ 0.39
Cald1-205ENSMUST00000115027 Ubl4bQ9CQ84 188 aa17.45■□□□□ 0.38
Cald1-205ENSMUST00000115027 Baz1aO88379 1555 aa17.42■□□□□ 0.38
Cald1-205ENSMUST00000115027 Ap3b1Q9Z1T1 1105 aa17.38■□□□□ 0.37
Cald1-205ENSMUST00000115027 Fam50aQ9WV03 339 aaKnown RBP17.34■□□□□ 0.37
Cald1-205ENSMUST00000115027 NclP09405 707 aaKnown RBP17.31■□□□□ 0.36
Cald1-205ENSMUST00000115027 Stra8P70278 393 aa17.31■□□□□ 0.36
Cald1-205ENSMUST00000115027 Kdm5dQ62240 1548 aa17.29■□□□□ 0.36
Cald1-205ENSMUST00000115027 Ercc6F8VPZ5 1481 aa17.28■□□□□ 0.36
Cald1-205ENSMUST00000115027 Rsf1E9PWW9 1441 aaKnown RBP17.17■□□□□ 0.34
Cald1-205ENSMUST00000115027 Cep164Q5DU05 1446 aa17.17■□□□□ 0.34
Cald1-205ENSMUST00000115027 Anp32bQ9EST5 272 aaKnown RBP17.16■□□□□ 0.34
Cald1-205ENSMUST00000115027 Pds5bQ4VA53 1446 aaKnown RBP17.15■□□□□ 0.34
Cald1-205ENSMUST00000115027 Pelp1Q9DBD5 1123 aaKnown RBP17.12■□□□□ 0.33
Cald1-205ENSMUST00000115027 Hdac5Q9Z2V6 1113 aa17.09■□□□□ 0.33
Cald1-205ENSMUST00000115027 Os9Q8K2C7 672 aa17.07■□□□□ 0.32
Cald1-205ENSMUST00000115027 Lmod2Q3UHZ5 550 aa17.05■□□□□ 0.32
Cald1-205ENSMUST00000115027 Kif15Q6P9L6 1387 aa17.04■□□□□ 0.32
Cald1-205ENSMUST00000115027 Golga3P55937 1487 aa17.02■□□□□ 0.32
Cald1-205ENSMUST00000115027 Sycp2Q9CUU3 1500 aa17■□□□□ 0.31
Cald1-205ENSMUST00000115027 Clip1Q922J3 1391 aa17■□□□□ 0.31
Cald1-205ENSMUST00000115027 Crybg2B7ZCC2 1516 aa16.99■□□□□ 0.31
Cald1-205ENSMUST00000115027 Ccdc18Q640L5 1455 aa16.99■□□□□ 0.31
Cald1-205ENSMUST00000115027 Chic1Q8CBW7 227 aa16.98■□□□□ 0.31
Cald1-205ENSMUST00000115027 Plekhg3Q4VAC9 1341 aa16.94■□□□□ 0.3
Cald1-205ENSMUST00000115027 Cdk11bP24788 784 aaKnown RBP16.93■□□□□ 0.3
Cald1-205ENSMUST00000115027 Neurod1Q60867 357 aa16.93■□□□□ 0.3
Cald1-205ENSMUST00000115027 TonslQ6NZL6 1363 aa16.91■□□□□ 0.3
Cald1-205ENSMUST00000115027 Gm13697A2AK42 830 aa16.9■□□□□ 0.3
Cald1-205ENSMUST00000115027 Ifnlr1Q8CGK5 535 aa16.9■□□□□ 0.3
Cald1-205ENSMUST00000115027 Ccer2J3QPU5 274 aa16.89■□□□□ 0.3
Cald1-205ENSMUST00000115027 NrdcQ8BHG1 1161 aa16.89■□□□□ 0.29
Cald1-205ENSMUST00000115027 Hnrnpul2Q00PI9 745 aaKnown RBP16.87■□□□□ 0.29
Cald1-205ENSMUST00000115027 Slc24a1Q91WD8 1130 aa16.84■□□□□ 0.29
Cald1-205ENSMUST00000115027 Fkbp15Q6P9Q6 1216 aaKnown RBP16.83■□□□□ 0.29
Cald1-205ENSMUST00000115027 Ttbk1Q6PCN3 1308 aa16.83■□□□□ 0.28
Cald1-205ENSMUST00000115027 Mier1Q5UAK0 511 aa16.81■□□□□ 0.28
Cald1-205ENSMUST00000115027 Clstn2Q9ER65 966 aa16.75■□□□□ 0.27
Cald1-205ENSMUST00000115027 Zbtb7cQ8VCZ7 619 aa16.74■□□□□ 0.27
Cald1-205ENSMUST00000115027 Setd5Q5XJV7 1441 aa16.7■□□□□ 0.26
Cald1-205ENSMUST00000115027 Atad2bE9Q166 1460 aaKnown RBP16.7■□□□□ 0.26
Cald1-205ENSMUST00000115027 ScribQ80U72 1612 aa16.66■□□□□ 0.26
Cald1-205ENSMUST00000115027 BlmO88700 1416 aa16.66■□□□□ 0.26
Cald1-205ENSMUST00000115027 Phldb1Q6PDH0 1371 aaKnown RBP16.64■□□□□ 0.25
Cald1-205ENSMUST00000115027 Tnnt3Q9QZ47 272 aa16.62■□□□□ 0.25
Cald1-205ENSMUST00000115027 Erich6D3Z6S9 713 aa16.61■□□□□ 0.25
Cald1-205ENSMUST00000115027 Fmn1Q05860 1466 aa16.61■□□□□ 0.25
Cald1-205ENSMUST00000115027 Eea1Q8BL66 1411 aa16.59■□□□□ 0.25
Cald1-205ENSMUST00000115027 Gm13695A2AK44 830 aa16.58■□□□□ 0.25
Cald1-205ENSMUST00000115027 Atp1b4Q99ME6 356 aa16.56■□□□□ 0.24
Cald1-205ENSMUST00000115027 NeflP08551 543 aa16.55■□□□□ 0.24
Cald1-205ENSMUST00000115027 CftrP26361 1476 aa16.55■□□□□ 0.24
Cald1-205ENSMUST00000115027 Arhgap27A2AB59 869 aa16.53■□□□□ 0.24
Cald1-205ENSMUST00000115027 Nop58Q6DFW4 536 aaKnown RBP16.53■□□□□ 0.24
Cald1-205ENSMUST00000115027 CenpbP27790 599 aa16.52■□□□□ 0.24
Cald1-205ENSMUST00000115027 Smarca2Q6DIC0 1577 aa16.49■□□□□ 0.23
Cald1-205ENSMUST00000115027 Smarca4Q3TKT4 1613 aaKnown RBP16.48■□□□□ 0.23
Cald1-205ENSMUST00000115027 Safb2Q80YR5 991 aaKnown RBP16.46■□□□□ 0.23
Cald1-205ENSMUST00000115027 Cux2P70298 1426 aa16.46■□□□□ 0.22
Cald1-205ENSMUST00000115027 ClspnQ80YR7 1315 aa16.43■□□□□ 0.22
Cald1-205ENSMUST00000115027 Chic2Q9D9G3 165 aa16.41■□□□□ 0.22
Cald1-205ENSMUST00000115027 Cecr2E9Q2Z1 1453 aa16.37■□□□□ 0.21
Cald1-205ENSMUST00000115027 Pcgf6Q99NA9 353 aa16.37■□□□□ 0.21
Cald1-205ENSMUST00000115027 Plppr3Q7TPB0 716 aa16.37■□□□□ 0.21
Cald1-205ENSMUST00000115027 Eid3Q3V124 375 aa16.35■□□□□ 0.21
Cald1-205ENSMUST00000115027 Nlrp6Q91WS2 869 aa16.33■□□□□ 0.21
Cald1-205ENSMUST00000115027 Cttnbp2B9EJA2 1648 aa16.3■□□□□ 0.2
Cald1-205ENSMUST00000115027 Mtus2Q3UHD3 1353 aa16.29■□□□□ 0.2
Cald1-205ENSMUST00000115027 Kif27Q7M6Z4 1394 aa16.28■□□□□ 0.2
Cald1-205ENSMUST00000115027 Cep162Q6ZQ06 1403 aa16.27■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms