RNA–Protein interactions for RNA: ENSMUST00000112736.7

Vps4b-202, Transcript of Vacuolar protein sorting-associated protein 4B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps4b, Length 4,539 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4b-202ENSMUST00000112736 Rhox8Q6VSS7 320 aa23.41■■□□□ 1.34
Vps4b-202ENSMUST00000112736 Ehmt2Q9Z148 1263 aaKnown RBP21.41■■□□□ 1.02
Vps4b-202ENSMUST00000112736 NischQ80TM9 1593 aa21.37■■□□□ 1.01
Vps4b-202ENSMUST00000112736 Ccdc136Q3TVA9 1136 aa21.24■□□□□ 0.99
Vps4b-202ENSMUST00000112736 Cngb1E1AZ71 1325 aa20.58■□□□□ 0.89
Vps4b-202ENSMUST00000112736 Gab3Q8BSM5 595 aa20.57■□□□□ 0.88
Vps4b-202ENSMUST00000112736 Esf1Q3V1V3 845 aaKnown RBP20.46■□□□□ 0.87
Vps4b-202ENSMUST00000112736 Trim41Q5NCC3 630 aa20.43■□□□□ 0.86
Vps4b-202ENSMUST00000112736 Rpgrip1Q9EPQ2 1331 aa20.41■□□□□ 0.86
Vps4b-202ENSMUST00000112736 Zeb1Q64318 1117 aa20.1■□□□□ 0.81
Vps4b-202ENSMUST00000112736 Abcc9P70170 1546 aa20.04■□□□□ 0.8
Vps4b-202ENSMUST00000112736 Myt1lP97500 1187 aa20.01■□□□□ 0.79
Vps4b-202ENSMUST00000112736 Wdr66E9Q743 1299 aa19.91■□□□□ 0.78
Vps4b-202ENSMUST00000112736 Npm2Q80W85 207 aa19.88■□□□□ 0.77
Vps4b-202ENSMUST00000112736 Acin1Q9JIX8 1338 aaKnown RBP19.78■□□□□ 0.76
Vps4b-202ENSMUST00000112736 Abcc8B2RUS7 1588 aa19.71■□□□□ 0.75
Vps4b-202ENSMUST00000112736 Gm35339A0A140LHH9 1649 aa19.71■□□□□ 0.75
Vps4b-202ENSMUST00000112736 UbtfP25976 765 aaKnown RBP19.69■□□□□ 0.74
Vps4b-202ENSMUST00000112736 HrcG5E8J6 738 aa19.64■□□□□ 0.73
Vps4b-202ENSMUST00000112736 Zcchc6Q5BLK4 1491 aaKnown RBP19.63■□□□□ 0.73
Vps4b-202ENSMUST00000112736 Las1lA2BE28 776 aaKnown RBP19.63■□□□□ 0.73
Vps4b-202ENSMUST00000112736 Ube2uB1AUC4 352 aa19.6■□□□□ 0.73
Vps4b-202ENSMUST00000112736 Il27Q8K3I6 234 aa19.52■□□□□ 0.72
Vps4b-202ENSMUST00000112736 Ccdc180J3QNE4 1664 aa19.52■□□□□ 0.72
Vps4b-202ENSMUST00000112736 Ppargc1bQ8VHJ7 1014 aa19.35■□□□□ 0.69
Vps4b-202ENSMUST00000112736 Pcgf6Q99NA9 353 aa19.29■□□□□ 0.68
Vps4b-202ENSMUST00000112736 Ap3b1Q9Z1T1 1105 aa19.24■□□□□ 0.67
Vps4b-202ENSMUST00000112736 NefmP08553 848 aa19.2■□□□□ 0.66
Vps4b-202ENSMUST00000112736 Rtl1Q7M732 1744 aa19.14■□□□□ 0.65
Vps4b-202ENSMUST00000112736 Supt5hO55201 1082 aaKnown RBP19.12■□□□□ 0.65
Vps4b-202ENSMUST00000112736 Chic1Q8CBW7 227 aa19.05■□□□□ 0.64
Vps4b-202ENSMUST00000112736 Mier1Q5UAK0 511 aa19■□□□□ 0.63
Vps4b-202ENSMUST00000112736 Slc24a1Q91WD8 1130 aa18.97■□□□□ 0.63
Vps4b-202ENSMUST00000112736 Fam50aQ9WV03 339 aaKnown RBP18.95■□□□□ 0.62
Vps4b-202ENSMUST00000112736 Plekhg3Q4VAC9 1341 aa18.87■□□□□ 0.61
Vps4b-202ENSMUST00000112736 Neurod1Q60867 357 aa18.78■□□□□ 0.6
Vps4b-202ENSMUST00000112736 Lmod2Q3UHZ5 550 aa18.76■□□□□ 0.59
Vps4b-202ENSMUST00000112736 Dcaf1Q80TR8 1506 aa18.75■□□□□ 0.59
Vps4b-202ENSMUST00000112736 Rb1cc1Q9ESK9 1588 aa18.74■□□□□ 0.59
Vps4b-202ENSMUST00000112736 Cdk11bP24788 784 aaKnown RBP18.73■□□□□ 0.59
Vps4b-202ENSMUST00000112736 Nop58Q6DFW4 536 aaKnown RBP18.66■□□□□ 0.58
Vps4b-202ENSMUST00000112736 NclP09405 707 aaKnown RBP18.66■□□□□ 0.58
Vps4b-202ENSMUST00000112736 Eid3Q3V124 375 aa18.65■□□□□ 0.58
Vps4b-202ENSMUST00000112736 Mapk8ip2Q9ERE9 830 aa18.61■□□□□ 0.57
Vps4b-202ENSMUST00000112736 TonslQ6NZL6 1363 aa18.6■□□□□ 0.57
Vps4b-202ENSMUST00000112736 Cep164Q5DU05 1446 aa18.53■□□□□ 0.56
Vps4b-202ENSMUST00000112736 Npm1Q61937 292 aaKnown RBP18.53■□□□□ 0.56
Vps4b-202ENSMUST00000112736 Brd4Q9ESU6 1400 aaKnown RBP18.52■□□□□ 0.56
Vps4b-202ENSMUST00000112736 Sall2Q9QX96 1004 aa18.52■□□□□ 0.55
Vps4b-202ENSMUST00000112736 CenpbP27790 599 aa18.48■□□□□ 0.55
Vps4b-202ENSMUST00000112736 Zbtb7cQ8VCZ7 619 aa18.46■□□□□ 0.55
Vps4b-202ENSMUST00000112736 Eif5bQ05D44 1216 aaKnown RBP18.38■□□□□ 0.53
Vps4b-202ENSMUST00000112736 Clip1Q922J3 1391 aa18.37■□□□□ 0.53
Vps4b-202ENSMUST00000112736 NacadQ5SWP3 1504 aa18.35■□□□□ 0.53
Vps4b-202ENSMUST00000112736 Gm38655A0A286YDK6 273 aa18.31■□□□□ 0.52
Vps4b-202ENSMUST00000112736 Stra8P70278 393 aa18.31■□□□□ 0.52
Vps4b-202ENSMUST00000112736 Baz1aO88379 1555 aa18.28■□□□□ 0.52
Vps4b-202ENSMUST00000112736 Zbtb4Q5F293 982 aa18.26■□□□□ 0.51
Vps4b-202ENSMUST00000112736 Kdm5dQ62240 1548 aa18.24■□□□□ 0.51
Vps4b-202ENSMUST00000112736 ClspnQ80YR7 1315 aa18.24■□□□□ 0.51
Vps4b-202ENSMUST00000112736 Rsf1E9PWW9 1441 aaKnown RBP18.24■□□□□ 0.51
Vps4b-202ENSMUST00000112736 Fkbp15Q6P9Q6 1216 aaKnown RBP18.22■□□□□ 0.51
Vps4b-202ENSMUST00000112736 Ifnlr1Q8CGK5 535 aa18.22■□□□□ 0.51
Vps4b-202ENSMUST00000112736 NrdcQ8BHG1 1161 aa18.21■□□□□ 0.51
Vps4b-202ENSMUST00000112736 Ubl4bQ9CQ84 188 aa18.21■□□□□ 0.5
Vps4b-202ENSMUST00000112736 Pelp1Q9DBD5 1123 aaKnown RBP18.2■□□□□ 0.5
Vps4b-202ENSMUST00000112736 Aebp2Q9Z248 504 aaKnown RBP18.16■□□□□ 0.5
Vps4b-202ENSMUST00000112736 Os9Q8K2C7 672 aa18.12■□□□□ 0.49
Vps4b-202ENSMUST00000112736 Chic2Q9D9G3 165 aa18.12■□□□□ 0.49
Vps4b-202ENSMUST00000112736 Hnrnpul2Q00PI9 745 aaKnown RBP18.12■□□□□ 0.49
Vps4b-202ENSMUST00000112736 Golga3P55937 1487 aa18.1■□□□□ 0.49
Vps4b-202ENSMUST00000112736 Csrnp3P59055 597 aa18.09■□□□□ 0.49
Vps4b-202ENSMUST00000112736 Ccdc88bQ4QRL3 1481 aa18.04■□□□□ 0.48
Vps4b-202ENSMUST00000112736 BlmO88700 1416 aa18■□□□□ 0.47
Vps4b-202ENSMUST00000112736 Ttbk1Q6PCN3 1308 aa18■□□□□ 0.47
Vps4b-202ENSMUST00000112736 Tnnt3Q9QZ47 272 aa17.99■□□□□ 0.47
Vps4b-202ENSMUST00000112736 Prdm10Q3UTQ7 1184 aa17.96■□□□□ 0.47
Vps4b-202ENSMUST00000112736 Setd5Q5XJV7 1441 aa17.95■□□□□ 0.46
Vps4b-202ENSMUST00000112736 Kif15Q6P9L6 1387 aa17.92■□□□□ 0.46
Vps4b-202ENSMUST00000112736 Anp32bQ9EST5 272 aaKnown RBP17.9■□□□□ 0.46
Vps4b-202ENSMUST00000112736 Erich6D3Z6S9 713 aa17.89■□□□□ 0.45
Vps4b-202ENSMUST00000112736 Anks4bQ8K3X6 423 aa17.86■□□□□ 0.45
Vps4b-202ENSMUST00000112736 Cecr2E9Q2Z1 1453 aa17.83■□□□□ 0.45
Vps4b-202ENSMUST00000112736 ScribQ80U72 1612 aa17.77■□□□□ 0.43
Vps4b-202ENSMUST00000112736 NeflP08551 543 aa17.74■□□□□ 0.43
Vps4b-202ENSMUST00000112736 Amer1Q7TS75 1132 aa17.74■□□□□ 0.43
Vps4b-202ENSMUST00000112736 Mrs2Q5NCE8 434 aa17.67■□□□□ 0.42
Vps4b-202ENSMUST00000112736 Sycp2Q9CUU3 1500 aa17.66■□□□□ 0.42
Vps4b-202ENSMUST00000112736 Eea1Q8BL66 1411 aa17.65■□□□□ 0.42
Vps4b-202ENSMUST00000112736 Ccer2J3QPU5 274 aa17.62■□□□□ 0.41
Vps4b-202ENSMUST00000112736 Rgl3Q3UYI5 709 aa17.62■□□□□ 0.41
Vps4b-202ENSMUST00000112736 Plppr3Q7TPB0 716 aa17.61■□□□□ 0.41
Vps4b-202ENSMUST00000112736 Atp1b4Q99ME6 356 aa17.61■□□□□ 0.41
Vps4b-202ENSMUST00000112736 Cep162Q6ZQ06 1403 aa17.6■□□□□ 0.41
Vps4b-202ENSMUST00000112736 Hspa5P20029 655 aaKnown RBP17.59■□□□□ 0.41
Vps4b-202ENSMUST00000112736 1700123L14RikQ3V2K7 440 aa17.59■□□□□ 0.41
Vps4b-202ENSMUST00000112736 P3h3Q8CG70 732 aa17.57■□□□□ 0.4
Vps4b-202ENSMUST00000112736 CftrP26361 1476 aa17.57■□□□□ 0.4
Vps4b-202ENSMUST00000112736 Rad21Q61550 635 aaKnown RBP17.56■□□□□ 0.4
Vps4b-202ENSMUST00000112736 Arhgap27A2AB59 869 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 52.3 ms