RNA–Protein interactions for RNA: ENSMUST00000112456.8

Sh3kbp1-206, Transcript of SH3 domain-containing kinase-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3kbp1, Length 7,317 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1-206ENSMUST00000112456 Rhox8Q6VSS7 320 aa22.17■■□□□ 1.14
Sh3kbp1-206ENSMUST00000112456 Ehmt2Q9Z148 1263 aaKnown RBP20.51■□□□□ 0.87
Sh3kbp1-206ENSMUST00000112456 Ube2uB1AUC4 352 aa20■□□□□ 0.79
Sh3kbp1-206ENSMUST00000112456 Wdr66E9Q743 1299 aa19.89■□□□□ 0.77
Sh3kbp1-206ENSMUST00000112456 Cngb1E1AZ71 1325 aa19.67■□□□□ 0.74
Sh3kbp1-206ENSMUST00000112456 Esf1Q3V1V3 845 aaKnown RBP19.65■□□□□ 0.74
Sh3kbp1-206ENSMUST00000112456 Zeb1Q64318 1117 aa19.6■□□□□ 0.73
Sh3kbp1-206ENSMUST00000112456 Ccdc136Q3TVA9 1136 aa19.55■□□□□ 0.72
Sh3kbp1-206ENSMUST00000112456 Las1lA2BE28 776 aaKnown RBP19.52■□□□□ 0.71
Sh3kbp1-206ENSMUST00000112456 Gab3Q8BSM5 595 aa19.47■□□□□ 0.71
Sh3kbp1-206ENSMUST00000112456 Pelp1Q9DBD5 1123 aaKnown RBP19.44■□□□□ 0.7
Sh3kbp1-206ENSMUST00000112456 Amer1Q7TS75 1132 aa19.36■□□□□ 0.69
Sh3kbp1-206ENSMUST00000112456 Rpgrip1Q9EPQ2 1331 aa19.33■□□□□ 0.69
Sh3kbp1-206ENSMUST00000112456 Npm2Q80W85 207 aa19.31■□□□□ 0.68
Sh3kbp1-206ENSMUST00000112456 Myt1lP97500 1187 aa19.27■□□□□ 0.68
Sh3kbp1-206ENSMUST00000112456 Slc24a1Q91WD8 1130 aa19.11■□□□□ 0.65
Sh3kbp1-206ENSMUST00000112456 Ttbk1Q6PCN3 1308 aa18.78■□□□□ 0.6
Sh3kbp1-206ENSMUST00000112456 UbtfP25976 765 aaKnown RBP18.72■□□□□ 0.59
Sh3kbp1-206ENSMUST00000112456 Trim41Q5NCC3 630 aa18.6■□□□□ 0.57
Sh3kbp1-206ENSMUST00000112456 Neurod1Q60867 357 aa18.49■□□□□ 0.55
Sh3kbp1-206ENSMUST00000112456 Il27Q8K3I6 234 aa18.49■□□□□ 0.55
Sh3kbp1-206ENSMUST00000112456 CenpbP27790 599 aa18.45■□□□□ 0.54
Sh3kbp1-206ENSMUST00000112456 4930567H17RikQ3V0K5 233 aa18.39■□□□□ 0.53
Sh3kbp1-206ENSMUST00000112456 Os9Q8K2C7 672 aa18.39■□□□□ 0.53
Sh3kbp1-206ENSMUST00000112456 Ap3b1Q9Z1T1 1105 aa18.37■□□□□ 0.53
Sh3kbp1-206ENSMUST00000112456 Eif5bQ05D44 1216 aaKnown RBP18.35■□□□□ 0.53
Sh3kbp1-206ENSMUST00000112456 4933416C03RikQ3V063 378 aa18.34■□□□□ 0.53
Sh3kbp1-206ENSMUST00000112456 Ppargc1bQ8VHJ7 1014 aa18.33■□□□□ 0.53
Sh3kbp1-206ENSMUST00000112456 Stra8P70278 393 aa18.21■□□□□ 0.51
Sh3kbp1-206ENSMUST00000112456 Chic1Q8CBW7 227 aa18.18■□□□□ 0.5
Sh3kbp1-206ENSMUST00000112456 Fam50aQ9WV03 339 aaKnown RBP18.18■□□□□ 0.5
Sh3kbp1-206ENSMUST00000112456 Zbtb7cQ8VCZ7 619 aa18.17■□□□□ 0.5
Sh3kbp1-206ENSMUST00000112456 HrcG5E8J6 738 aa18.14■□□□□ 0.49
Sh3kbp1-206ENSMUST00000112456 NrdcQ8BHG1 1161 aa18.09■□□□□ 0.49
Sh3kbp1-206ENSMUST00000112456 NeflP08551 543 aa18.03■□□□□ 0.48
Sh3kbp1-206ENSMUST00000112456 NclP09405 707 aaKnown RBP18.02■□□□□ 0.48
Sh3kbp1-206ENSMUST00000112456 Ifnlr1Q8CGK5 535 aa17.98■□□□□ 0.47
Sh3kbp1-206ENSMUST00000112456 NefmP08553 848 aa17.96■□□□□ 0.47
Sh3kbp1-206ENSMUST00000112456 Anp32bQ9EST5 272 aaKnown RBP17.95■□□□□ 0.46
Sh3kbp1-206ENSMUST00000112456 Plppr3Q7TPB0 716 aa17.93■□□□□ 0.46
Sh3kbp1-206ENSMUST00000112456 Zbtb4Q5F293 982 aa17.91■□□□□ 0.46
Sh3kbp1-206ENSMUST00000112456 Cdk11bP24788 784 aaKnown RBP17.9■□□□□ 0.46
Sh3kbp1-206ENSMUST00000112456 Gm13697A2AK42 830 aa17.87■□□□□ 0.45
Sh3kbp1-206ENSMUST00000112456 Prdm10Q3UTQ7 1184 aa17.86■□□□□ 0.45
Sh3kbp1-206ENSMUST00000112456 Acin1Q9JIX8 1338 aaKnown RBP17.86■□□□□ 0.45
Sh3kbp1-206ENSMUST00000112456 Hnrnpul2Q00PI9 745 aaKnown RBP17.78■□□□□ 0.44
Sh3kbp1-206ENSMUST00000112456 Atp1b4Q99ME6 356 aa17.76■□□□□ 0.43
Sh3kbp1-206ENSMUST00000112456 ArxO35085 564 aa17.69■□□□□ 0.42
Sh3kbp1-206ENSMUST00000112456 Nop58Q6DFW4 536 aaKnown RBP17.68■□□□□ 0.42
Sh3kbp1-206ENSMUST00000112456 Polr3glQ8R0C0 218 aa17.66■□□□□ 0.42
Sh3kbp1-206ENSMUST00000112456 Erich6D3Z6S9 713 aa17.65■□□□□ 0.42
Sh3kbp1-206ENSMUST00000112456 Rangap1P46061 589 aaKnown RBP17.6■□□□□ 0.41
Sh3kbp1-206ENSMUST00000112456 Lmod2Q3UHZ5 550 aa17.56■□□□□ 0.4
Sh3kbp1-206ENSMUST00000112456 Myt1Q8CFC2 1127 aa17.52■□□□□ 0.4
Sh3kbp1-206ENSMUST00000112456 Gm13695A2AK44 830 aa17.52■□□□□ 0.4
Sh3kbp1-206ENSMUST00000112456 Mapk8ip2Q9ERE9 830 aa17.51■□□□□ 0.39
Sh3kbp1-206ENSMUST00000112456 Gm35339A0A140LHH9 1649 aa17.49■□□□□ 0.39
Sh3kbp1-206ENSMUST00000112456 Tnnt3Q9QZ47 272 aa17.48■□□□□ 0.39
Sh3kbp1-206ENSMUST00000112456 Pcgf6Q99NA9 353 aa17.47■□□□□ 0.39
Sh3kbp1-206ENSMUST00000112456 Nlrp6Q91WS2 869 aa17.46■□□□□ 0.39
Sh3kbp1-206ENSMUST00000112456 TonslQ6NZL6 1363 aa17.44■□□□□ 0.38
Sh3kbp1-206ENSMUST00000112456 DaxxO35613 739 aa17.44■□□□□ 0.38
Sh3kbp1-206ENSMUST00000112456 DiexfQ8BTT6 772 aaKnown RBP17.43■□□□□ 0.38
Sh3kbp1-206ENSMUST00000112456 NischQ80TM9 1593 aa17.41■□□□□ 0.38
Sh3kbp1-206ENSMUST00000112456 Fkbp15Q6P9Q6 1216 aaKnown RBP17.41■□□□□ 0.38
Sh3kbp1-206ENSMUST00000112456 Supt5hO55201 1082 aaKnown RBP17.36■□□□□ 0.37
Sh3kbp1-206ENSMUST00000112456 Csrnp3P59055 597 aa17.35■□□□□ 0.37
Sh3kbp1-206ENSMUST00000112456 Ythdc1E9Q5K9 736 aaKnown RBP17.34■□□□□ 0.37
Sh3kbp1-206ENSMUST00000112456 Plekhg3Q4VAC9 1341 aa17.3■□□□□ 0.36
Sh3kbp1-206ENSMUST00000112456 Gm38655A0A286YDK6 273 aa17.28■□□□□ 0.36
Sh3kbp1-206ENSMUST00000112456 Zcchc6Q5BLK4 1491 aaKnown RBP17.27■□□□□ 0.36
Sh3kbp1-206ENSMUST00000112456 CatipB9EKE5 520 aa17.26■□□□□ 0.35
Sh3kbp1-206ENSMUST00000112456 Abcc9P70170 1546 aa17.21■□□□□ 0.35
Sh3kbp1-206ENSMUST00000112456 Mier1Q5UAK0 511 aa17.19■□□□□ 0.34
Sh3kbp1-206ENSMUST00000112456 Npm1Q61937 292 aaKnown RBP17.19■□□□□ 0.34
Sh3kbp1-206ENSMUST00000112456 Ccdc180J3QNE4 1664 aa17.15■□□□□ 0.34
Sh3kbp1-206ENSMUST00000112456 Lmod3E9QA62 571 aa17.15■□□□□ 0.34
Sh3kbp1-206ENSMUST00000112456 Vsig10D3YX43 558 aa17.14■□□□□ 0.33
Sh3kbp1-206ENSMUST00000112456 Irx6Q9ER75 438 aa17.09■□□□□ 0.33
Sh3kbp1-206ENSMUST00000112456 Eid3Q3V124 375 aa17.06■□□□□ 0.32
Sh3kbp1-206ENSMUST00000112456 Rad21Q61550 635 aaKnown RBP17.02■□□□□ 0.32
Sh3kbp1-206ENSMUST00000112456 Safb2Q80YR5 991 aaKnown RBP16.99■□□□□ 0.31
Sh3kbp1-206ENSMUST00000112456 P3h3Q8CG70 732 aa16.99■□□□□ 0.31
Sh3kbp1-206ENSMUST00000112456 Hsp90aa1P07901 733 aaKnown RBP16.97■□□□□ 0.31
Sh3kbp1-206ENSMUST00000112456 Trim26Q99PN3 545 aa16.97■□□□□ 0.31
Sh3kbp1-206ENSMUST00000112456 Rtl5Q5DTT4 599 aa16.93■□□□□ 0.3
Sh3kbp1-206ENSMUST00000112456 Upf2A2AT37 1269 aaKnown RBP16.93■□□□□ 0.3
Sh3kbp1-206ENSMUST00000112456 Anp32aO35381 247 aa16.92■□□□□ 0.3
Sh3kbp1-206ENSMUST00000112456 DekQ7TNV0 380 aaKnown RBP16.91■□□□□ 0.3
Sh3kbp1-206ENSMUST00000112456 Rtn4Q99P72 1162 aaKnown RBP16.84■□□□□ 0.29
Sh3kbp1-206ENSMUST00000112456 Clstn1Q9EPL2 979 aa16.84■□□□□ 0.29
Sh3kbp1-206ENSMUST00000112456 Arid4bA2CG63 1314 aaKnown RBP16.84■□□□□ 0.29
Sh3kbp1-206ENSMUST00000112456 Fgd1P52734 960 aa16.81■□□□□ 0.28
Sh3kbp1-206ENSMUST00000112456 Rtl1Q7M732 1744 aa16.8■□□□□ 0.28
Sh3kbp1-206ENSMUST00000112456 Znf326O88291 580 aa16.79■□□□□ 0.28
Sh3kbp1-206ENSMUST00000112456 Ppp4r2Q0VGB7 417 aa16.78■□□□□ 0.28
Sh3kbp1-206ENSMUST00000112456 Chic2Q9D9G3 165 aa16.77■□□□□ 0.28
Sh3kbp1-206ENSMUST00000112456 ClspnQ80YR7 1315 aa16.76■□□□□ 0.27
Sh3kbp1-206ENSMUST00000112456 Hdac5Q9Z2V6 1113 aa16.74■□□□□ 0.27
Sh3kbp1-206ENSMUST00000112456 NgefQ8CHT1 710 aa16.64■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms