RNA–Protein interactions for RNA: ENSMUST00000112390.7

Chd4-202, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd4, Length 6,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-202ENSMUST00000112390 Rhox8Q6VSS7 320 aa27.55■■■□□ 2
Chd4-202ENSMUST00000112390 Rpgrip1Q9EPQ2 1331 aa24.94■■□□□ 1.58
Chd4-202ENSMUST00000112390 Ehmt2Q9Z148 1263 aaKnown RBP24.93■■□□□ 1.58
Chd4-202ENSMUST00000112390 Ccdc136Q3TVA9 1136 aa24.34■■□□□ 1.49
Chd4-202ENSMUST00000112390 Wdr66E9Q743 1299 aa24.33■■□□□ 1.49
Chd4-202ENSMUST00000112390 Cngb1E1AZ71 1325 aa24.32■■□□□ 1.48
Chd4-202ENSMUST00000112390 Esf1Q3V1V3 845 aaKnown RBP24.3■■□□□ 1.48
Chd4-202ENSMUST00000112390 Las1lA2BE28 776 aaKnown RBP24.23■■□□□ 1.47
Chd4-202ENSMUST00000112390 Ube2uB1AUC4 352 aa24.19■■□□□ 1.46
Chd4-202ENSMUST00000112390 Gab3Q8BSM5 595 aa24.01■■□□□ 1.43
Chd4-202ENSMUST00000112390 Zeb1Q64318 1117 aa24■■□□□ 1.43
Chd4-202ENSMUST00000112390 Pelp1Q9DBD5 1123 aaKnown RBP23.89■■□□□ 1.42
Chd4-202ENSMUST00000112390 Npm2Q80W85 207 aa23.85■■□□□ 1.41
Chd4-202ENSMUST00000112390 Trim41Q5NCC3 630 aa23.68■■□□□ 1.38
Chd4-202ENSMUST00000112390 Myt1lP97500 1187 aa23.68■■□□□ 1.38
Chd4-202ENSMUST00000112390 NischQ80TM9 1593 aa23.17■■□□□ 1.3
Chd4-202ENSMUST00000112390 UbtfP25976 765 aaKnown RBP23.16■■□□□ 1.3
Chd4-202ENSMUST00000112390 Amer1Q7TS75 1132 aa23.13■■□□□ 1.29
Chd4-202ENSMUST00000112390 CenpbP27790 599 aa23.08■■□□□ 1.28
Chd4-202ENSMUST00000112390 Slc24a1Q91WD8 1130 aa23.07■■□□□ 1.28
Chd4-202ENSMUST00000112390 Acin1Q9JIX8 1338 aaKnown RBP23.02■■□□□ 1.28
Chd4-202ENSMUST00000112390 NefmP08553 848 aa22.99■■□□□ 1.27
Chd4-202ENSMUST00000112390 Stra8P70278 393 aa22.93■■□□□ 1.26
Chd4-202ENSMUST00000112390 Il27Q8K3I6 234 aa22.76■■□□□ 1.23
Chd4-202ENSMUST00000112390 Ap3b1Q9Z1T1 1105 aa22.51■■□□□ 1.19
Chd4-202ENSMUST00000112390 Cdk11bP24788 784 aaKnown RBP22.51■■□□□ 1.19
Chd4-202ENSMUST00000112390 Neurod1Q60867 357 aa22.49■■□□□ 1.19
Chd4-202ENSMUST00000112390 Fam50aQ9WV03 339 aaKnown RBP22.47■■□□□ 1.19
Chd4-202ENSMUST00000112390 Ttbk1Q6PCN3 1308 aa22.46■■□□□ 1.19
Chd4-202ENSMUST00000112390 Ccdc180J3QNE4 1664 aa22.45■■□□□ 1.19
Chd4-202ENSMUST00000112390 NrdcQ8BHG1 1161 aa22.43■■□□□ 1.18
Chd4-202ENSMUST00000112390 Anp32bQ9EST5 272 aaKnown RBP22.37■■□□□ 1.17
Chd4-202ENSMUST00000112390 HrcG5E8J6 738 aa22.36■■□□□ 1.17
Chd4-202ENSMUST00000112390 NclP09405 707 aaKnown RBP22.35■■□□□ 1.17
Chd4-202ENSMUST00000112390 Os9Q8K2C7 672 aa22.34■■□□□ 1.17
Chd4-202ENSMUST00000112390 Eif5bQ05D44 1216 aaKnown RBP22.31■■□□□ 1.16
Chd4-202ENSMUST00000112390 4933416C03RikQ3V063 378 aa22.3■■□□□ 1.16
Chd4-202ENSMUST00000112390 Ppargc1bQ8VHJ7 1014 aa22.28■■□□□ 1.16
Chd4-202ENSMUST00000112390 NeflP08551 543 aa22.26■■□□□ 1.15
Chd4-202ENSMUST00000112390 4930567H17RikQ3V0K5 233 aa22.24■■□□□ 1.15
Chd4-202ENSMUST00000112390 Pcgf6Q99NA9 353 aa22.23■■□□□ 1.15
Chd4-202ENSMUST00000112390 Nop58Q6DFW4 536 aaKnown RBP22.23■■□□□ 1.15
Chd4-202ENSMUST00000112390 Tnnt3Q9QZ47 272 aa22.2■■□□□ 1.14
Chd4-202ENSMUST00000112390 Zcchc6Q5BLK4 1491 aaKnown RBP22.16■■□□□ 1.14
Chd4-202ENSMUST00000112390 Rtl1Q7M732 1744 aa22.08■■□□□ 1.13
Chd4-202ENSMUST00000112390 TonslQ6NZL6 1363 aa22.02■■□□□ 1.12
Chd4-202ENSMUST00000112390 Abcc9P70170 1546 aa21.95■■□□□ 1.1
Chd4-202ENSMUST00000112390 Supt5hO55201 1082 aaKnown RBP21.92■■□□□ 1.1
Chd4-202ENSMUST00000112390 Zbtb7cQ8VCZ7 619 aa21.9■■□□□ 1.1
Chd4-202ENSMUST00000112390 Gm35339A0A140LHH9 1649 aa21.89■■□□□ 1.09
Chd4-202ENSMUST00000112390 Myt1Q8CFC2 1127 aa21.85■■□□□ 1.09
Chd4-202ENSMUST00000112390 Mier1Q5UAK0 511 aa21.8■■□□□ 1.08
Chd4-202ENSMUST00000112390 Lmod2Q3UHZ5 550 aa21.76■■□□□ 1.07
Chd4-202ENSMUST00000112390 Hnrnpul2Q00PI9 745 aaKnown RBP21.72■■□□□ 1.07
Chd4-202ENSMUST00000112390 Chic1Q8CBW7 227 aa21.66■■□□□ 1.06
Chd4-202ENSMUST00000112390 Gm13697A2AK42 830 aa21.66■■□□□ 1.06
Chd4-202ENSMUST00000112390 Npm1Q61937 292 aaKnown RBP21.64■■□□□ 1.05
Chd4-202ENSMUST00000112390 Plekhg3Q4VAC9 1341 aa21.64■■□□□ 1.05
Chd4-202ENSMUST00000112390 Zbtb4Q5F293 982 aa21.61■■□□□ 1.05
Chd4-202ENSMUST00000112390 Ifnlr1Q8CGK5 535 aa21.61■■□□□ 1.05
Chd4-202ENSMUST00000112390 Rtl5Q5DTT4 599 aa21.57■■□□□ 1.04
Chd4-202ENSMUST00000112390 Erich6D3Z6S9 713 aa21.52■■□□□ 1.03
Chd4-202ENSMUST00000112390 Atp1b4Q99ME6 356 aa21.49■■□□□ 1.03
Chd4-202ENSMUST00000112390 Nlrp6Q91WS2 869 aa21.47■■□□□ 1.03
Chd4-202ENSMUST00000112390 Prdm10Q3UTQ7 1184 aa21.46■■□□□ 1.03
Chd4-202ENSMUST00000112390 ClspnQ80YR7 1315 aa21.46■■□□□ 1.03
Chd4-202ENSMUST00000112390 Mapk8ip2Q9ERE9 830 aa21.43■■□□□ 1.02
Chd4-202ENSMUST00000112390 Polr3glQ8R0C0 218 aa21.4■■□□□ 1.02
Chd4-202ENSMUST00000112390 DaxxO35613 739 aa21.39■■□□□ 1.01
Chd4-202ENSMUST00000112390 Anp32aO35381 247 aa21.37■■□□□ 1.01
Chd4-202ENSMUST00000112390 Eid3Q3V124 375 aa21.28■■□□□ 1
Chd4-202ENSMUST00000112390 Gm13695A2AK44 830 aa21.28■■□□□ 1
Chd4-202ENSMUST00000112390 Fkbp15Q6P9Q6 1216 aaKnown RBP21.27■■□□□ 1
Chd4-202ENSMUST00000112390 ArxO35085 564 aa21.26■□□□□ 0.99
Chd4-202ENSMUST00000112390 Gm38655A0A286YDK6 273 aa21.17■□□□□ 0.98
Chd4-202ENSMUST00000112390 Csrnp3P59055 597 aa21.16■□□□□ 0.98
Chd4-202ENSMUST00000112390 Plppr3Q7TPB0 716 aa21.12■□□□□ 0.97
Chd4-202ENSMUST00000112390 Hdac5Q9Z2V6 1113 aa21.11■□□□□ 0.97
Chd4-202ENSMUST00000112390 Clip1Q922J3 1391 aa21.11■□□□□ 0.97
Chd4-202ENSMUST00000112390 Rangap1P46061 589 aaKnown RBP21.06■□□□□ 0.96
Chd4-202ENSMUST00000112390 DiexfQ8BTT6 772 aaKnown RBP21.01■□□□□ 0.95
Chd4-202ENSMUST00000112390 Sall2Q9QX96 1004 aa21■□□□□ 0.95
Chd4-202ENSMUST00000112390 Brd4Q9ESU6 1400 aaKnown RBP20.93■□□□□ 0.94
Chd4-202ENSMUST00000112390 Rad21Q61550 635 aaKnown RBP20.92■□□□□ 0.94
Chd4-202ENSMUST00000112390 Chic2Q9D9G3 165 aa20.9■□□□□ 0.94
Chd4-202ENSMUST00000112390 Ccer2J3QPU5 274 aa20.9■□□□□ 0.94
Chd4-202ENSMUST00000112390 Ppp4r2Q0VGB7 417 aa20.88■□□□□ 0.93
Chd4-202ENSMUST00000112390 Calr4Q3TQS0 420 aa20.86■□□□□ 0.93
Chd4-202ENSMUST00000112390 Anks4bQ8K3X6 423 aa20.84■□□□□ 0.93
Chd4-202ENSMUST00000112390 Ubl4bQ9CQ84 188 aa20.81■□□□□ 0.92
Chd4-202ENSMUST00000112390 Cep164Q5DU05 1446 aa20.79■□□□□ 0.92
Chd4-202ENSMUST00000112390 Abcc8B2RUS7 1588 aa20.79■□□□□ 0.92
Chd4-202ENSMUST00000112390 Upf2A2AT37 1269 aaKnown RBP20.78■□□□□ 0.92
Chd4-202ENSMUST00000112390 Mrs2Q5NCE8 434 aa20.74■□□□□ 0.91
Chd4-202ENSMUST00000112390 CatipB9EKE5 520 aa20.73■□□□□ 0.91
Chd4-202ENSMUST00000112390 Dcaf1Q80TR8 1506 aa20.7■□□□□ 0.9
Chd4-202ENSMUST00000112390 BlmO88700 1416 aa20.69■□□□□ 0.9
Chd4-202ENSMUST00000112390 Hsp90aa1P07901 733 aaKnown RBP20.68■□□□□ 0.9
Chd4-202ENSMUST00000112390 Safb2Q80YR5 991 aaKnown RBP20.67■□□□□ 0.9
Chd4-202ENSMUST00000112390 Aplp2Q06335 707 aa20.66■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms