RNA–Protein interactions for RNA: ENSMUST00000111566.8

Clip1-205, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clip1, Length 6,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-205ENSMUST00000111566 Rhox8Q6VSS7 320 aa34.67■■■■□ 3.14
Clip1-205ENSMUST00000111566 Rpgrip1Q9EPQ2 1331 aa32.6■■■□□ 2.81
Clip1-205ENSMUST00000111566 Ehmt2Q9Z148 1263 aaKnown RBP32.19■■■□□ 2.74
Clip1-205ENSMUST00000111566 Las1lA2BE28 776 aaKnown RBP31.8■■■□□ 2.68
Clip1-205ENSMUST00000111566 Cngb1E1AZ71 1325 aa31.71■■■□□ 2.67
Clip1-205ENSMUST00000111566 Wdr66E9Q743 1299 aa31.36■■■□□ 2.61
Clip1-205ENSMUST00000111566 Pelp1Q9DBD5 1123 aaKnown RBP31.1■■■□□ 2.57
Clip1-205ENSMUST00000111566 Zeb1Q64318 1117 aa31.04■■■□□ 2.56
Clip1-205ENSMUST00000111566 Ccdc136Q3TVA9 1136 aa30.65■■■□□ 2.5
Clip1-205ENSMUST00000111566 Ube2uB1AUC4 352 aa30.52■■■□□ 2.48
Clip1-205ENSMUST00000111566 Amer1Q7TS75 1132 aa30.41■■■□□ 2.46
Clip1-205ENSMUST00000111566 Gab3Q8BSM5 595 aa30.4■■■□□ 2.46
Clip1-205ENSMUST00000111566 Esf1Q3V1V3 845 aaKnown RBP30.31■■■□□ 2.44
Clip1-205ENSMUST00000111566 CenpbP27790 599 aa30.3■■■□□ 2.44
Clip1-205ENSMUST00000111566 NischQ80TM9 1593 aa30.22■■■□□ 2.43
Clip1-205ENSMUST00000111566 Acin1Q9JIX8 1338 aaKnown RBP30.02■■■□□ 2.4
Clip1-205ENSMUST00000111566 Npm2Q80W85 207 aa29.93■■■□□ 2.38
Clip1-205ENSMUST00000111566 Trim41Q5NCC3 630 aa29.87■■■□□ 2.37
Clip1-205ENSMUST00000111566 Myt1lP97500 1187 aa29.84■■■□□ 2.37
Clip1-205ENSMUST00000111566 Slc24a1Q91WD8 1130 aa29.62■■■□□ 2.33
Clip1-205ENSMUST00000111566 NefmP08553 848 aa29.58■■■□□ 2.33
Clip1-205ENSMUST00000111566 UbtfP25976 765 aaKnown RBP29.52■■■□□ 2.32
Clip1-205ENSMUST00000111566 Ttbk1Q6PCN3 1308 aa29.5■■■□□ 2.31
Clip1-205ENSMUST00000111566 Stra8P70278 393 aa29.48■■■□□ 2.31
Clip1-205ENSMUST00000111566 Pcgf6Q99NA9 353 aa29.27■■■□□ 2.28
Clip1-205ENSMUST00000111566 Cdk11bP24788 784 aaKnown RBP29.26■■■□□ 2.27
Clip1-205ENSMUST00000111566 4933416C03RikQ3V063 378 aa29.11■■■□□ 2.25
Clip1-205ENSMUST00000111566 Myt1Q8CFC2 1127 aa29.11■■■□□ 2.25
Clip1-205ENSMUST00000111566 4930567H17RikQ3V0K5 233 aa29.04■■■□□ 2.24
Clip1-205ENSMUST00000111566 Nop58Q6DFW4 536 aaKnown RBP28.87■■■□□ 2.21
Clip1-205ENSMUST00000111566 Ppargc1bQ8VHJ7 1014 aa28.82■■■□□ 2.2
Clip1-205ENSMUST00000111566 Ccdc180J3QNE4 1664 aa28.82■■■□□ 2.2
Clip1-205ENSMUST00000111566 Tnnt3Q9QZ47 272 aa28.81■■■□□ 2.2
Clip1-205ENSMUST00000111566 Eif5bQ05D44 1216 aaKnown RBP28.76■■■□□ 2.2
Clip1-205ENSMUST00000111566 Supt5hO55201 1082 aaKnown RBP28.72■■■□□ 2.19
Clip1-205ENSMUST00000111566 NrdcQ8BHG1 1161 aa28.67■■■□□ 2.18
Clip1-205ENSMUST00000111566 HrcG5E8J6 738 aa28.62■■■□□ 2.17
Clip1-205ENSMUST00000111566 NeflP08551 543 aa28.56■■■□□ 2.16
Clip1-205ENSMUST00000111566 Neurod1Q60867 357 aa28.53■■■□□ 2.16
Clip1-205ENSMUST00000111566 NclP09405 707 aaKnown RBP28.52■■■□□ 2.16
Clip1-205ENSMUST00000111566 Fam50aQ9WV03 339 aaKnown RBP28.41■■■□□ 2.14
Clip1-205ENSMUST00000111566 Ap3b1Q9Z1T1 1105 aa28.4■■■□□ 2.14
Clip1-205ENSMUST00000111566 Anp32bQ9EST5 272 aaKnown RBP28.38■■■□□ 2.13
Clip1-205ENSMUST00000111566 Il27Q8K3I6 234 aa28.31■■■□□ 2.12
Clip1-205ENSMUST00000111566 Rtl1Q7M732 1744 aa28.31■■■□□ 2.12
Clip1-205ENSMUST00000111566 Rtl5Q5DTT4 599 aa28.29■■■□□ 2.12
Clip1-205ENSMUST00000111566 DiexfQ8BTT6 772 aaKnown RBP28.26■■■□□ 2.11
Clip1-205ENSMUST00000111566 TonslQ6NZL6 1363 aa28.26■■■□□ 2.11
Clip1-205ENSMUST00000111566 Abcc9P70170 1546 aa28.23■■■□□ 2.11
Clip1-205ENSMUST00000111566 Os9Q8K2C7 672 aa28.07■■■□□ 2.08
Clip1-205ENSMUST00000111566 Mier1Q5UAK0 511 aa28.04■■■□□ 2.08
Clip1-205ENSMUST00000111566 Zcchc6Q5BLK4 1491 aaKnown RBP28.02■■■□□ 2.08
Clip1-205ENSMUST00000111566 Anp32aO35381 247 aa27.92■■■□□ 2.06
Clip1-205ENSMUST00000111566 DaxxO35613 739 aa27.9■■■□□ 2.06
Clip1-205ENSMUST00000111566 Gm38655A0A286YDK6 273 aa27.89■■■□□ 2.05
Clip1-205ENSMUST00000111566 ClspnQ80YR7 1315 aa27.76■■■□□ 2.03
Clip1-205ENSMUST00000111566 Gm35339A0A140LHH9 1649 aa27.68■■■□□ 2.02
Clip1-205ENSMUST00000111566 Csrnp3P59055 597 aa27.65■■■□□ 2.02
Clip1-205ENSMUST00000111566 Abcc8B2RUS7 1588 aa27.64■■■□□ 2.02
Clip1-205ENSMUST00000111566 Mapk8ip2Q9ERE9 830 aa27.58■■■□□ 2.01
Clip1-205ENSMUST00000111566 Zbtb7cQ8VCZ7 619 aa27.48■■□□□ 1.99
Clip1-205ENSMUST00000111566 ArxO35085 564 aa27.46■■□□□ 1.99
Clip1-205ENSMUST00000111566 Plekhg3Q4VAC9 1341 aa27.43■■□□□ 1.98
Clip1-205ENSMUST00000111566 Anks4bQ8K3X6 423 aa27.4■■□□□ 1.98
Clip1-205ENSMUST00000111566 Lmod2Q3UHZ5 550 aa27.39■■□□□ 1.97
Clip1-205ENSMUST00000111566 Zbtb4Q5F293 982 aa27.37■■□□□ 1.97
Clip1-205ENSMUST00000111566 Sall2Q9QX96 1004 aa27.36■■□□□ 1.97
Clip1-205ENSMUST00000111566 Chic1Q8CBW7 227 aa27.28■■□□□ 1.96
Clip1-205ENSMUST00000111566 Polr3glQ8R0C0 218 aa27.27■■□□□ 1.96
Clip1-205ENSMUST00000111566 Aplp2Q06335 707 aa27.27■■□□□ 1.96
Clip1-205ENSMUST00000111566 Nlrp6Q91WS2 869 aa27.23■■□□□ 1.95
Clip1-205ENSMUST00000111566 Hnrnpul2Q00PI9 745 aaKnown RBP27.18■■□□□ 1.94
Clip1-205ENSMUST00000111566 Eid3Q3V124 375 aa27.16■■□□□ 1.94
Clip1-205ENSMUST00000111566 Ppp4r2Q0VGB7 417 aa27.16■■□□□ 1.94
Clip1-205ENSMUST00000111566 Prdm10Q3UTQ7 1184 aa27.14■■□□□ 1.94
Clip1-205ENSMUST00000111566 Calr4Q3TQS0 420 aa27.1■■□□□ 1.93
Clip1-205ENSMUST00000111566 Npm1Q61937 292 aaKnown RBP27.02■■□□□ 1.92
Clip1-205ENSMUST00000111566 Erich6D3Z6S9 713 aa26.98■■□□□ 1.91
Clip1-205ENSMUST00000111566 CatipB9EKE5 520 aa26.97■■□□□ 1.91
Clip1-205ENSMUST00000111566 Ythdc1E9Q5K9 736 aaKnown RBP26.93■■□□□ 1.9
Clip1-205ENSMUST00000111566 Upf2A2AT37 1269 aaKnown RBP26.88■■□□□ 1.89
Clip1-205ENSMUST00000111566 Lmod3E9QA62 571 aa26.87■■□□□ 1.89
Clip1-205ENSMUST00000111566 Hsp90aa1P07901 733 aaKnown RBP26.87■■□□□ 1.89
Clip1-205ENSMUST00000111566 Atp1b4Q99ME6 356 aa26.87■■□□□ 1.89
Clip1-205ENSMUST00000111566 Gm13697A2AK42 830 aa26.84■■□□□ 1.89
Clip1-205ENSMUST00000111566 Rangap1P46061 589 aaKnown RBP26.83■■□□□ 1.89
Clip1-205ENSMUST00000111566 Wdr43Q6ZQL4 677 aaKnown RBP26.83■■□□□ 1.89
Clip1-205ENSMUST00000111566 Brd4Q9ESU6 1400 aaKnown RBP26.81■■□□□ 1.88
Clip1-205ENSMUST00000111566 Dcaf1Q80TR8 1506 aa26.78■■□□□ 1.88
Clip1-205ENSMUST00000111566 Rad21Q61550 635 aaKnown RBP26.77■■□□□ 1.88
Clip1-205ENSMUST00000111566 Ifnlr1Q8CGK5 535 aa26.74■■□□□ 1.87
Clip1-205ENSMUST00000111566 Vsig10D3YX43 558 aa26.71■■□□□ 1.87
Clip1-205ENSMUST00000111566 DekQ7TNV0 380 aaKnown RBP26.69■■□□□ 1.86
Clip1-205ENSMUST00000111566 Clip1Q922J3 1391 aa26.68■■□□□ 1.86
Clip1-205ENSMUST00000111566 Fam71e1A1L3C1 212 aa26.65■■□□□ 1.86
Clip1-205ENSMUST00000111566 1700123L14RikQ3V2K7 440 aa26.64■■□□□ 1.86
Clip1-205ENSMUST00000111566 Mrs2Q5NCE8 434 aa26.58■■□□□ 1.85
Clip1-205ENSMUST00000111566 Ccdc9Q8VC31 543 aaKnown RBP26.58■■□□□ 1.84
Clip1-205ENSMUST00000111566 Rb1cc1Q9ESK9 1588 aa26.58■■□□□ 1.84
Clip1-205ENSMUST00000111566 Trim44Q9QXA7 346 aa26.5■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms