RNA–Protein interactions for RNA: ENSMUST00000111566.8

Clip1-205, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clip1, Length 6,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-205ENSMUST00000111566 Rhox8Q6VSS7 320 aa34,67■■■■□ 3,14
Clip1-205ENSMUST00000111566 Rpgrip1Q9EPQ2 1331 aa32,6■■■□□ 2,81
Clip1-205ENSMUST00000111566 Ehmt2Q9Z148 1263 aaKnown RBP32,19■■■□□ 2,74
Clip1-205ENSMUST00000111566 Las1lA2BE28 776 aaKnown RBP31,8■■■□□ 2,68
Clip1-205ENSMUST00000111566 Cngb1E1AZ71 1325 aa31,71■■■□□ 2,67
Clip1-205ENSMUST00000111566 Wdr66E9Q743 1299 aa31,36■■■□□ 2,61
Clip1-205ENSMUST00000111566 Pelp1Q9DBD5 1123 aaKnown RBP31,1■■■□□ 2,57
Clip1-205ENSMUST00000111566 Zeb1Q64318 1117 aa31,04■■■□□ 2,56
Clip1-205ENSMUST00000111566 Ccdc136Q3TVA9 1136 aa30,65■■■□□ 2,5
Clip1-205ENSMUST00000111566 Ube2uB1AUC4 352 aa30,52■■■□□ 2,48
Clip1-205ENSMUST00000111566 Amer1Q7TS75 1132 aa30,41■■■□□ 2,46
Clip1-205ENSMUST00000111566 Gab3Q8BSM5 595 aa30,4■■■□□ 2,46
Clip1-205ENSMUST00000111566 Esf1Q3V1V3 845 aaKnown RBP30,31■■■□□ 2,44
Clip1-205ENSMUST00000111566 CenpbP27790 599 aa30,3■■■□□ 2,44
Clip1-205ENSMUST00000111566 NischQ80TM9 1593 aa30,22■■■□□ 2,43
Clip1-205ENSMUST00000111566 Acin1Q9JIX8 1338 aaKnown RBP30,02■■■□□ 2,4
Clip1-205ENSMUST00000111566 Npm2Q80W85 207 aa29,93■■■□□ 2,38
Clip1-205ENSMUST00000111566 Trim41Q5NCC3 630 aa29,87■■■□□ 2,37
Clip1-205ENSMUST00000111566 Myt1lP97500 1187 aa29,84■■■□□ 2,37
Clip1-205ENSMUST00000111566 Slc24a1Q91WD8 1130 aa29,62■■■□□ 2,33
Clip1-205ENSMUST00000111566 NefmP08553 848 aa29,58■■■□□ 2,33
Clip1-205ENSMUST00000111566 UbtfP25976 765 aaKnown RBP29,52■■■□□ 2,32
Clip1-205ENSMUST00000111566 Ttbk1Q6PCN3 1308 aa29,5■■■□□ 2,31
Clip1-205ENSMUST00000111566 Stra8P70278 393 aa29,48■■■□□ 2,31
Clip1-205ENSMUST00000111566 Pcgf6Q99NA9 353 aa29,27■■■□□ 2,28
Clip1-205ENSMUST00000111566 Cdk11bP24788 784 aaKnown RBP29,26■■■□□ 2,27
Clip1-205ENSMUST00000111566 4933416C03RikQ3V063 378 aa29,11■■■□□ 2,25
Clip1-205ENSMUST00000111566 Myt1Q8CFC2 1127 aa29,11■■■□□ 2,25
Clip1-205ENSMUST00000111566 4930567H17RikQ3V0K5 233 aa29,04■■■□□ 2,24
Clip1-205ENSMUST00000111566 Nop58Q6DFW4 536 aaKnown RBP28,87■■■□□ 2,21
Clip1-205ENSMUST00000111566 Ppargc1bQ8VHJ7 1014 aa28,82■■■□□ 2,2
Clip1-205ENSMUST00000111566 Ccdc180J3QNE4 1664 aa28,82■■■□□ 2,2
Clip1-205ENSMUST00000111566 Tnnt3Q9QZ47 272 aa28,81■■■□□ 2,2
Clip1-205ENSMUST00000111566 Eif5bQ05D44 1216 aaKnown RBP28,76■■■□□ 2,2
Clip1-205ENSMUST00000111566 Supt5hO55201 1082 aaKnown RBP28,72■■■□□ 2,19
Clip1-205ENSMUST00000111566 NrdcQ8BHG1 1161 aa28,67■■■□□ 2,18
Clip1-205ENSMUST00000111566 HrcG5E8J6 738 aa28,62■■■□□ 2,17
Clip1-205ENSMUST00000111566 NeflP08551 543 aa28,56■■■□□ 2,16
Clip1-205ENSMUST00000111566 Neurod1Q60867 357 aa28,53■■■□□ 2,16
Clip1-205ENSMUST00000111566 NclP09405 707 aaKnown RBP28,52■■■□□ 2,16
Clip1-205ENSMUST00000111566 Fam50aQ9WV03 339 aaKnown RBP28,41■■■□□ 2,14
Clip1-205ENSMUST00000111566 Ap3b1Q9Z1T1 1105 aa28,4■■■□□ 2,14
Clip1-205ENSMUST00000111566 Anp32bQ9EST5 272 aaKnown RBP28,38■■■□□ 2,13
Clip1-205ENSMUST00000111566 Il27Q8K3I6 234 aa28,31■■■□□ 2,12
Clip1-205ENSMUST00000111566 Rtl1Q7M732 1744 aa28,31■■■□□ 2,12
Clip1-205ENSMUST00000111566 Rtl5Q5DTT4 599 aa28,29■■■□□ 2,12
Clip1-205ENSMUST00000111566 DiexfQ8BTT6 772 aaKnown RBP28,26■■■□□ 2,11
Clip1-205ENSMUST00000111566 TonslQ6NZL6 1363 aa28,26■■■□□ 2,11
Clip1-205ENSMUST00000111566 Abcc9P70170 1546 aa28,23■■■□□ 2,11
Clip1-205ENSMUST00000111566 Os9Q8K2C7 672 aa28,07■■■□□ 2,08
Clip1-205ENSMUST00000111566 Mier1Q5UAK0 511 aa28,04■■■□□ 2,08
Clip1-205ENSMUST00000111566 Zcchc6Q5BLK4 1491 aaKnown RBP28,02■■■□□ 2,08
Clip1-205ENSMUST00000111566 Anp32aO35381 247 aa27,92■■■□□ 2,06
Clip1-205ENSMUST00000111566 DaxxO35613 739 aa27,9■■■□□ 2,06
Clip1-205ENSMUST00000111566 Gm38655A0A286YDK6 273 aa27,89■■■□□ 2,05
Clip1-205ENSMUST00000111566 ClspnQ80YR7 1315 aa27,76■■■□□ 2,03
Clip1-205ENSMUST00000111566 Gm35339A0A140LHH9 1649 aa27,68■■■□□ 2,02
Clip1-205ENSMUST00000111566 Csrnp3P59055 597 aa27,65■■■□□ 2,02
Clip1-205ENSMUST00000111566 Abcc8B2RUS7 1588 aa27,64■■■□□ 2,02
Clip1-205ENSMUST00000111566 Mapk8ip2Q9ERE9 830 aa27,58■■■□□ 2,01
Clip1-205ENSMUST00000111566 Zbtb7cQ8VCZ7 619 aa27,48■■□□□ 1,99
Clip1-205ENSMUST00000111566 ArxO35085 564 aa27,46■■□□□ 1,99
Clip1-205ENSMUST00000111566 Plekhg3Q4VAC9 1341 aa27,43■■□□□ 1,98
Clip1-205ENSMUST00000111566 Anks4bQ8K3X6 423 aa27,4■■□□□ 1,98
Clip1-205ENSMUST00000111566 Lmod2Q3UHZ5 550 aa27,39■■□□□ 1,97
Clip1-205ENSMUST00000111566 Zbtb4Q5F293 982 aa27,37■■□□□ 1,97
Clip1-205ENSMUST00000111566 Sall2Q9QX96 1004 aa27,36■■□□□ 1,97
Clip1-205ENSMUST00000111566 Chic1Q8CBW7 227 aa27,28■■□□□ 1,96
Clip1-205ENSMUST00000111566 Polr3glQ8R0C0 218 aa27,27■■□□□ 1,96
Clip1-205ENSMUST00000111566 Aplp2Q06335 707 aa27,27■■□□□ 1,96
Clip1-205ENSMUST00000111566 Nlrp6Q91WS2 869 aa27,23■■□□□ 1,95
Clip1-205ENSMUST00000111566 Hnrnpul2Q00PI9 745 aaKnown RBP27,18■■□□□ 1,94
Clip1-205ENSMUST00000111566 Eid3Q3V124 375 aa27,16■■□□□ 1,94
Clip1-205ENSMUST00000111566 Ppp4r2Q0VGB7 417 aa27,16■■□□□ 1,94
Clip1-205ENSMUST00000111566 Prdm10Q3UTQ7 1184 aa27,14■■□□□ 1,94
Clip1-205ENSMUST00000111566 Calr4Q3TQS0 420 aa27,1■■□□□ 1,93
Clip1-205ENSMUST00000111566 Npm1Q61937 292 aaKnown RBP27,02■■□□□ 1,92
Clip1-205ENSMUST00000111566 Erich6D3Z6S9 713 aa26,98■■□□□ 1,91
Clip1-205ENSMUST00000111566 CatipB9EKE5 520 aa26,97■■□□□ 1,91
Clip1-205ENSMUST00000111566 Ythdc1E9Q5K9 736 aaKnown RBP26,93■■□□□ 1,9
Clip1-205ENSMUST00000111566 Upf2A2AT37 1269 aaKnown RBP26,88■■□□□ 1,89
Clip1-205ENSMUST00000111566 Lmod3E9QA62 571 aa26,87■■□□□ 1,89
Clip1-205ENSMUST00000111566 Hsp90aa1P07901 733 aaKnown RBP26,87■■□□□ 1,89
Clip1-205ENSMUST00000111566 Atp1b4Q99ME6 356 aa26,87■■□□□ 1,89
Clip1-205ENSMUST00000111566 Gm13697A2AK42 830 aa26,84■■□□□ 1,89
Clip1-205ENSMUST00000111566 Rangap1P46061 589 aaKnown RBP26,83■■□□□ 1,89
Clip1-205ENSMUST00000111566 Wdr43Q6ZQL4 677 aaKnown RBP26,83■■□□□ 1,89
Clip1-205ENSMUST00000111566 Brd4Q9ESU6 1400 aaKnown RBP26,81■■□□□ 1,88
Clip1-205ENSMUST00000111566 Dcaf1Q80TR8 1506 aa26,78■■□□□ 1,88
Clip1-205ENSMUST00000111566 Rad21Q61550 635 aaKnown RBP26,77■■□□□ 1,88
Clip1-205ENSMUST00000111566 Ifnlr1Q8CGK5 535 aa26,74■■□□□ 1,87
Clip1-205ENSMUST00000111566 Vsig10D3YX43 558 aa26,71■■□□□ 1,87
Clip1-205ENSMUST00000111566 DekQ7TNV0 380 aaKnown RBP26,69■■□□□ 1,86
Clip1-205ENSMUST00000111566 Clip1Q922J3 1391 aa26,68■■□□□ 1,86
Clip1-205ENSMUST00000111566 Fam71e1A1L3C1 212 aa26,65■■□□□ 1,86
Clip1-205ENSMUST00000111566 1700123L14RikQ3V2K7 440 aa26,64■■□□□ 1,86
Clip1-205ENSMUST00000111566 Mrs2Q5NCE8 434 aa26,58■■□□□ 1,85
Clip1-205ENSMUST00000111566 Ccdc9Q8VC31 543 aaKnown RBP26,58■■□□□ 1,84
Clip1-205ENSMUST00000111566 Rb1cc1Q9ESK9 1588 aa26,58■■□□□ 1,84
Clip1-205ENSMUST00000111566 Trim44Q9QXA7 346 aa26,5■■□□□ 1,83
Retrieved 100 of 22,080 RNA–protein pairs in 11,4 ms