RNA–Protein interactions for RNA: ENSMUST00000111561.7

Clip1-203, Transcript of CAP-Gly domain-containing linker protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Clip1, Length 5,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1-203ENSMUST00000111561 Rhox8Q6VSS7 320 aa18■□□□□ 0.47
Clip1-203ENSMUST00000111561 Rpgrip1Q9EPQ2 1331 aa16.94■□□□□ 0.3
Clip1-203ENSMUST00000111561 Cngb1E1AZ71 1325 aa16.6■□□□□ 0.25
Clip1-203ENSMUST00000111561 Las1lA2BE28 776 aaKnown RBP16.56■□□□□ 0.24
Clip1-203ENSMUST00000111561 Ehmt2Q9Z148 1263 aaKnown RBP16.4■□□□□ 0.22
Clip1-203ENSMUST00000111561 Pelp1Q9DBD5 1123 aaKnown RBP16.28■□□□□ 0.2
Clip1-203ENSMUST00000111561 Wdr66E9Q743 1299 aa16.18■□□□□ 0.18
Clip1-203ENSMUST00000111561 Esf1Q3V1V3 845 aaKnown RBP16.16■□□□□ 0.18
Clip1-203ENSMUST00000111561 Zeb1Q64318 1117 aa16.02■□□□□ 0.16
Clip1-203ENSMUST00000111561 Ube2uB1AUC4 352 aa15.99■□□□□ 0.15
Clip1-203ENSMUST00000111561 Ccdc136Q3TVA9 1136 aa15.79■□□□□ 0.12
Clip1-203ENSMUST00000111561 Amer1Q7TS75 1132 aa15.78■□□□□ 0.12
Clip1-203ENSMUST00000111561 Npm2Q80W85 207 aa15.73■□□□□ 0.11
Clip1-203ENSMUST00000111561 CenpbP27790 599 aa15.73■□□□□ 0.11
Clip1-203ENSMUST00000111561 Gab3Q8BSM5 595 aa15.62■□□□□ 0.09
Clip1-203ENSMUST00000111561 Myt1lP97500 1187 aa15.48■□□□□ 0.07
Clip1-203ENSMUST00000111561 Trim41Q5NCC3 630 aa15.44■□□□□ 0.06
Clip1-203ENSMUST00000111561 Acin1Q9JIX8 1338 aaKnown RBP15.42■□□□□ 0.06
Clip1-203ENSMUST00000111561 Stra8P70278 393 aa15.4■□□□□ 0.06
Clip1-203ENSMUST00000111561 NefmP08553 848 aa15.35■□□□□ 0.05
Clip1-203ENSMUST00000111561 4930567H17RikQ3V0K5 233 aa15.27■□□□□ 0.03
Clip1-203ENSMUST00000111561 Slc24a1Q91WD8 1130 aa15.25■□□□□ 0.03
Clip1-203ENSMUST00000111561 Myt1Q8CFC2 1127 aa15.2■□□□□ 0.02
Clip1-203ENSMUST00000111561 UbtfP25976 765 aaKnown RBP15.18■□□□□ 0.02
Clip1-203ENSMUST00000111561 Ttbk1Q6PCN3 1308 aa15.17■□□□□ 0.02
Clip1-203ENSMUST00000111561 Il27Q8K3I6 234 aa15.17■□□□□ 0.02
Clip1-203ENSMUST00000111561 Cdk11bP24788 784 aaKnown RBP15.12■□□□□ 0.01
Clip1-203ENSMUST00000111561 4933416C03RikQ3V063 378 aa15.1■□□□□ 0.01
Clip1-203ENSMUST00000111561 Tnnt3Q9QZ47 272 aa14.99□□□□□ -0.01
Clip1-203ENSMUST00000111561 Pcgf6Q99NA9 353 aa14.98□□□□□ -0.01
Clip1-203ENSMUST00000111561 NrdcQ8BHG1 1161 aa14.9□□□□□ -0.02
Clip1-203ENSMUST00000111561 Nop58Q6DFW4 536 aaKnown RBP14.89□□□□□ -0.03
Clip1-203ENSMUST00000111561 NeflP08551 543 aa14.87□□□□□ -0.03
Clip1-203ENSMUST00000111561 Anp32bQ9EST5 272 aaKnown RBP14.85□□□□□ -0.03
Clip1-203ENSMUST00000111561 Os9Q8K2C7 672 aa14.84□□□□□ -0.03
Clip1-203ENSMUST00000111561 HrcG5E8J6 738 aa14.81□□□□□ -0.04
Clip1-203ENSMUST00000111561 Eif5bQ05D44 1216 aaKnown RBP14.8□□□□□ -0.04
Clip1-203ENSMUST00000111561 Rtl5Q5DTT4 599 aa14.76□□□□□ -0.05
Clip1-203ENSMUST00000111561 Gm13697A2AK42 830 aa14.74□□□□□ -0.05
Clip1-203ENSMUST00000111561 NclP09405 707 aaKnown RBP14.74□□□□□ -0.05
Clip1-203ENSMUST00000111561 NischQ80TM9 1593 aa14.72□□□□□ -0.05
Clip1-203ENSMUST00000111561 Ccdc180J3QNE4 1664 aa14.71□□□□□ -0.05
Clip1-203ENSMUST00000111561 Neurod1Q60867 357 aa14.7□□□□□ -0.06
Clip1-203ENSMUST00000111561 Ppargc1bQ8VHJ7 1014 aa14.66□□□□□ -0.06
Clip1-203ENSMUST00000111561 Fam50aQ9WV03 339 aaKnown RBP14.66□□□□□ -0.06
Clip1-203ENSMUST00000111561 Ifnlr1Q8CGK5 535 aa14.66□□□□□ -0.06
Clip1-203ENSMUST00000111561 Supt5hO55201 1082 aaKnown RBP14.65□□□□□ -0.06
Clip1-203ENSMUST00000111561 Ap3b1Q9Z1T1 1105 aa14.64□□□□□ -0.07
Clip1-203ENSMUST00000111561 Abcc9P70170 1546 aa14.6□□□□□ -0.07
Clip1-203ENSMUST00000111561 Plppr3Q7TPB0 716 aa14.58□□□□□ -0.08
Clip1-203ENSMUST00000111561 DiexfQ8BTT6 772 aaKnown RBP14.58□□□□□ -0.08
Clip1-203ENSMUST00000111561 TonslQ6NZL6 1363 aa14.57□□□□□ -0.08
Clip1-203ENSMUST00000111561 Npm1Q61937 292 aaKnown RBP14.53□□□□□ -0.08
Clip1-203ENSMUST00000111561 Zbtb7cQ8VCZ7 619 aa14.5□□□□□ -0.09
Clip1-203ENSMUST00000111561 Gm35339A0A140LHH9 1649 aa14.49□□□□□ -0.09
Clip1-203ENSMUST00000111561 Anp32aO35381 247 aa14.45□□□□□ -0.1
Clip1-203ENSMUST00000111561 DaxxO35613 739 aa14.44□□□□□ -0.1
Clip1-203ENSMUST00000111561 Hnrnpul2Q00PI9 745 aaKnown RBP14.44□□□□□ -0.1
Clip1-203ENSMUST00000111561 Zcchc6Q5BLK4 1491 aaKnown RBP14.41□□□□□ -0.1
Clip1-203ENSMUST00000111561 Gm13695A2AK44 830 aa14.41□□□□□ -0.1
Clip1-203ENSMUST00000111561 Rtl1Q7M732 1744 aa14.4□□□□□ -0.1
Clip1-203ENSMUST00000111561 Atp1b4Q99ME6 356 aa14.39□□□□□ -0.11
Clip1-203ENSMUST00000111561 Mier1Q5UAK0 511 aa14.36□□□□□ -0.11
Clip1-203ENSMUST00000111561 Chic1Q8CBW7 227 aa14.36□□□□□ -0.11
Clip1-203ENSMUST00000111561 ClspnQ80YR7 1315 aa14.31□□□□□ -0.12
Clip1-203ENSMUST00000111561 Erich6D3Z6S9 713 aa14.25□□□□□ -0.13
Clip1-203ENSMUST00000111561 Fkbp15Q6P9Q6 1216 aaKnown RBP14.25□□□□□ -0.13
Clip1-203ENSMUST00000111561 Safb2Q80YR5 991 aaKnown RBP14.19□□□□□ -0.14
Clip1-203ENSMUST00000111561 Lmod2Q3UHZ5 550 aa14.18□□□□□ -0.14
Clip1-203ENSMUST00000111561 Gm38655A0A286YDK6 273 aa14.15□□□□□ -0.14
Clip1-203ENSMUST00000111561 Nlrp6Q91WS2 869 aa14.12□□□□□ -0.15
Clip1-203ENSMUST00000111561 ArxO35085 564 aa14.11□□□□□ -0.15
Clip1-203ENSMUST00000111561 Anks4bQ8K3X6 423 aa14.1□□□□□ -0.15
Clip1-203ENSMUST00000111561 Csrnp3P59055 597 aa14.1□□□□□ -0.15
Clip1-203ENSMUST00000111561 Polr3glQ8R0C0 218 aa14.07□□□□□ -0.16
Clip1-203ENSMUST00000111561 Aplp2Q06335 707 aa14.07□□□□□ -0.16
Clip1-203ENSMUST00000111561 Zbtb4Q5F293 982 aa14.07□□□□□ -0.16
Clip1-203ENSMUST00000111561 Mapk8ip2Q9ERE9 830 aa14.06□□□□□ -0.16
Clip1-203ENSMUST00000111561 Plekhg3Q4VAC9 1341 aa14.06□□□□□ -0.16
Clip1-203ENSMUST00000111561 CatipB9EKE5 520 aa14.05□□□□□ -0.16
Clip1-203ENSMUST00000111561 Prdm10Q3UTQ7 1184 aa14.05□□□□□ -0.16
Clip1-203ENSMUST00000111561 Ubl4bQ9CQ84 188 aa14.02□□□□□ -0.17
Clip1-203ENSMUST00000111561 Upf2A2AT37 1269 aaKnown RBP14□□□□□ -0.17
Clip1-203ENSMUST00000111561 Hdac5Q9Z2V6 1113 aa14□□□□□ -0.17
Clip1-203ENSMUST00000111561 Sall2Q9QX96 1004 aa13.99□□□□□ -0.17
Clip1-203ENSMUST00000111561 Ppp4r2Q0VGB7 417 aa13.98□□□□□ -0.17
Clip1-203ENSMUST00000111561 Calr4Q3TQS0 420 aa13.97□□□□□ -0.17
Clip1-203ENSMUST00000111561 Ythdc1E9Q5K9 736 aaKnown RBP13.94□□□□□ -0.18
Clip1-203ENSMUST00000111561 Eid3Q3V124 375 aa13.92□□□□□ -0.18
Clip1-203ENSMUST00000111561 Ccdc9Q8VC31 543 aaKnown RBP13.9□□□□□ -0.18
Clip1-203ENSMUST00000111561 Hsp90aa1P07901 733 aaKnown RBP13.9□□□□□ -0.18
Clip1-203ENSMUST00000111561 Lmod3E9QA62 571 aa13.89□□□□□ -0.19
Clip1-203ENSMUST00000111561 Wdr43Q6ZQL4 677 aaKnown RBP13.86□□□□□ -0.19
Clip1-203ENSMUST00000111561 P3h3Q8CG70 732 aa13.82□□□□□ -0.2
Clip1-203ENSMUST00000111561 DekQ7TNV0 380 aaKnown RBP13.81□□□□□ -0.2
Clip1-203ENSMUST00000111561 Ccer2J3QPU5 274 aa13.78□□□□□ -0.2
Clip1-203ENSMUST00000111561 Trim44Q9QXA7 346 aa13.78□□□□□ -0.2
Clip1-203ENSMUST00000111561 Rad21Q61550 635 aaKnown RBP13.77□□□□□ -0.2
Clip1-203ENSMUST00000111561 MyclP10166 368 aa13.77□□□□□ -0.2
Clip1-203ENSMUST00000111561 Rangap1P46061 589 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 136.6 ms