RNA–Protein interactions for RNA: ENSMUST00000111233.7

Limk1-202, Transcript of LIM domain kinase 1, mousemouse

TSL 1 (best) BASIC

Gene Limk1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1-202ENSMUST00000111233 NischQ80TM9 1593 aa19.15■□□□□ 0.66
Limk1-202ENSMUST00000111233 Gm35339A0A140LHH9 1649 aa18.61■□□□□ 0.57
Limk1-202ENSMUST00000111233 Abcc9P70170 1546 aa18.55■□□□□ 0.56
Limk1-202ENSMUST00000111233 Rhox8Q6VSS7 320 aa18.14■□□□□ 0.49
Limk1-202ENSMUST00000111233 Abcc8B2RUS7 1588 aa18.1■□□□□ 0.49
Limk1-202ENSMUST00000111233 Rtl1Q7M732 1744 aa17.66■□□□□ 0.42
Limk1-202ENSMUST00000111233 Ccdc180J3QNE4 1664 aa17.43■□□□□ 0.38
Limk1-202ENSMUST00000111233 Zcchc6Q5BLK4 1491 aaKnown RBP17.08■□□□□ 0.32
Limk1-202ENSMUST00000111233 ScribQ80U72 1612 aa16.85■□□□□ 0.29
Limk1-202ENSMUST00000111233 Ccdc136Q3TVA9 1136 aa16.82■□□□□ 0.28
Limk1-202ENSMUST00000111233 Rb1cc1Q9ESK9 1588 aa16.81■□□□□ 0.28
Limk1-202ENSMUST00000111233 Dcaf1Q80TR8 1506 aa16.77■□□□□ 0.28
Limk1-202ENSMUST00000111233 Ehmt2Q9Z148 1263 aaKnown RBP16.73■□□□□ 0.27
Limk1-202ENSMUST00000111233 Rpgrip1Q9EPQ2 1331 aa16.71■□□□□ 0.26
Limk1-202ENSMUST00000111233 HrcG5E8J6 738 aa16.59■□□□□ 0.25
Limk1-202ENSMUST00000111233 Kdm5dQ62240 1548 aa16.58■□□□□ 0.24
Limk1-202ENSMUST00000111233 Baz1aO88379 1555 aa16.56■□□□□ 0.24
Limk1-202ENSMUST00000111233 Acin1Q9JIX8 1338 aaKnown RBP16.54■□□□□ 0.24
Limk1-202ENSMUST00000111233 Trim41Q5NCC3 630 aa16.41■□□□□ 0.22
Limk1-202ENSMUST00000111233 NacadQ5SWP3 1504 aa16.36■□□□□ 0.21
Limk1-202ENSMUST00000111233 Smarca2Q6DIC0 1577 aa16.2■□□□□ 0.18
Limk1-202ENSMUST00000111233 Cep164Q5DU05 1446 aa16.1■□□□□ 0.17
Limk1-202ENSMUST00000111233 Crybg2B7ZCC2 1516 aa16.08■□□□□ 0.16
Limk1-202ENSMUST00000111233 Cngb1E1AZ71 1325 aa16.07■□□□□ 0.16
Limk1-202ENSMUST00000111233 Sycp2Q9CUU3 1500 aa16.01■□□□□ 0.15
Limk1-202ENSMUST00000111233 Gab3Q8BSM5 595 aa16■□□□□ 0.15
Limk1-202ENSMUST00000111233 Pcgf6Q99NA9 353 aa15.99■□□□□ 0.15
Limk1-202ENSMUST00000111233 Chic1Q8CBW7 227 aa15.98■□□□□ 0.15
Limk1-202ENSMUST00000111233 Rsf1E9PWW9 1441 aaKnown RBP15.93■□□□□ 0.14
Limk1-202ENSMUST00000111233 Cecr2E9Q2Z1 1453 aa15.88■□□□□ 0.13
Limk1-202ENSMUST00000111233 Brd4Q9ESU6 1400 aaKnown RBP15.84■□□□□ 0.13
Limk1-202ENSMUST00000111233 Ccdc88bQ4QRL3 1481 aa15.81■□□□□ 0.12
Limk1-202ENSMUST00000111233 Supt5hO55201 1082 aaKnown RBP15.77■□□□□ 0.12
Limk1-202ENSMUST00000111233 Synj1Q8CHC4 1574 aa15.76■□□□□ 0.11
Limk1-202ENSMUST00000111233 Golga3P55937 1487 aa15.75■□□□□ 0.11
Limk1-202ENSMUST00000111233 Esf1Q3V1V3 845 aaKnown RBP15.73■□□□□ 0.11
Limk1-202ENSMUST00000111233 BicraF8VPZ9 1578 aa15.68■□□□□ 0.1
Limk1-202ENSMUST00000111233 Zeb1Q64318 1117 aa15.64■□□□□ 0.09
Limk1-202ENSMUST00000111233 Mier1Q5UAK0 511 aa15.6■□□□□ 0.09
Limk1-202ENSMUST00000111233 CftrP26361 1476 aa15.6■□□□□ 0.09
Limk1-202ENSMUST00000111233 Top2bQ64511 1612 aa15.51■□□□□ 0.07
Limk1-202ENSMUST00000111233 Cc2d2aQ8CFW7 1633 aa15.48■□□□□ 0.07
Limk1-202ENSMUST00000111233 Cttnbp2B9EJA2 1648 aa15.48■□□□□ 0.07
Limk1-202ENSMUST00000111233 NefmP08553 848 aa15.48■□□□□ 0.07
Limk1-202ENSMUST00000111233 UbtfP25976 765 aaKnown RBP15.42■□□□□ 0.06
Limk1-202ENSMUST00000111233 Smarca4Q3TKT4 1613 aaKnown RBP15.37■□□□□ 0.05
Limk1-202ENSMUST00000111233 Myt1lP97500 1187 aa15.37■□□□□ 0.05
Limk1-202ENSMUST00000111233 Neurod1Q60867 357 aa15.37■□□□□ 0.05
Limk1-202ENSMUST00000111233 Sall2Q9QX96 1004 aa15.34■□□□□ 0.05
Limk1-202ENSMUST00000111233 Rapgef2Q8CHG7 1496 aa15.3■□□□□ 0.04
Limk1-202ENSMUST00000111233 Fmn1Q05860 1466 aa15.27■□□□□ 0.04
Limk1-202ENSMUST00000111233 Top2aQ01320 1528 aaKnown RBP15.24■□□□□ 0.03
Limk1-202ENSMUST00000111233 Npm2Q80W85 207 aa15.24■□□□□ 0.03
Limk1-202ENSMUST00000111233 Cep162Q6ZQ06 1403 aa15.22■□□□□ 0.03
Limk1-202ENSMUST00000111233 Wdr66E9Q743 1299 aa15.21■□□□□ 0.02
Limk1-202ENSMUST00000111233 Iqgap2Q3UQ44 1575 aa15.18■□□□□ 0.02
Limk1-202ENSMUST00000111233 Las1lA2BE28 776 aaKnown RBP15.16■□□□□ 0.02
Limk1-202ENSMUST00000111233 Aebp2Q9Z248 504 aaKnown RBP15.16■□□□□ 0.02
Limk1-202ENSMUST00000111233 Plekhg3Q4VAC9 1341 aa15.14■□□□□ 0.01
Limk1-202ENSMUST00000111233 Ppargc1bQ8VHJ7 1014 aa15.13■□□□□ 0.01
Limk1-202ENSMUST00000111233 Clip1Q922J3 1391 aa15.08■□□□□ 0
Limk1-202ENSMUST00000111233 Il27Q8K3I6 234 aa15.01□□□□□ -0.01
Limk1-202ENSMUST00000111233 Atad2bE9Q166 1460 aaKnown RBP15□□□□□ -0.01
Limk1-202ENSMUST00000111233 Eif4g1Q6NZJ6 1600 aaKnown RBP14.99□□□□□ -0.01
Limk1-202ENSMUST00000111233 TonslQ6NZL6 1363 aa14.98□□□□□ -0.01
Limk1-202ENSMUST00000111233 Ap3b1Q9Z1T1 1105 aa14.98□□□□□ -0.01
Limk1-202ENSMUST00000111233 ClspnQ80YR7 1315 aa14.97□□□□□ -0.01
Limk1-202ENSMUST00000111233 PtprkP35822 1457 aa14.93□□□□□ -0.02
Limk1-202ENSMUST00000111233 TnnQ80Z71 1560 aa14.93□□□□□ -0.02
Limk1-202ENSMUST00000111233 Arhgap35Q91YM2 1499 aa14.91□□□□□ -0.02
Limk1-202ENSMUST00000111233 Anks4bQ8K3X6 423 aa14.91□□□□□ -0.02
Limk1-202ENSMUST00000111233 Ncapd3Q6ZQK0 1506 aa14.9□□□□□ -0.02
Limk1-202ENSMUST00000111233 Nop58Q6DFW4 536 aaKnown RBP14.89□□□□□ -0.03
Limk1-202ENSMUST00000111233 Pds5bQ4VA53 1446 aaKnown RBP14.89□□□□□ -0.03
Limk1-202ENSMUST00000111233 Cdk11bP24788 784 aaKnown RBP14.88□□□□□ -0.03
Limk1-202ENSMUST00000111233 Csrnp3P59055 597 aa14.88□□□□□ -0.03
Limk1-202ENSMUST00000111233 Frmpd1A2AKB4 1549 aa14.86□□□□□ -0.03
Limk1-202ENSMUST00000111233 Arap1Q4LDD4 1452 aa14.85□□□□□ -0.03
Limk1-202ENSMUST00000111233 Eid3Q3V124 375 aa14.85□□□□□ -0.03
Limk1-202ENSMUST00000111233 Kif15Q6P9L6 1387 aa14.84□□□□□ -0.03
Limk1-202ENSMUST00000111233 Eea1Q8BL66 1411 aa14.83□□□□□ -0.04
Limk1-202ENSMUST00000111233 Wdr62Q3U3T8 1523 aa14.81□□□□□ -0.04
Limk1-202ENSMUST00000111233 Setd5Q5XJV7 1441 aa14.81□□□□□ -0.04
Limk1-202ENSMUST00000111233 NrkQ9R0G8 1455 aa14.8□□□□□ -0.04
Limk1-202ENSMUST00000111233 Lamc3Q9R0B6 1581 aa14.78□□□□□ -0.04
Limk1-202ENSMUST00000111233 1700123L14RikQ3V2K7 440 aa14.77□□□□□ -0.05
Limk1-202ENSMUST00000111233 Shroom4Q1W617 1475 aa14.76□□□□□ -0.05
Limk1-202ENSMUST00000111233 Arhgef5E9Q7D5 1581 aa14.75□□□□□ -0.05
Limk1-202ENSMUST00000111233 Unc13aQ4KUS2 1712 aa14.74□□□□□ -0.05
Limk1-202ENSMUST00000111233 Camsap1A2AHC3 1581 aa14.73□□□□□ -0.05
Limk1-202ENSMUST00000111233 Ercc6F8VPZ5 1481 aa14.7□□□□□ -0.06
Limk1-202ENSMUST00000111233 Ccdc18Q640L5 1455 aa14.69□□□□□ -0.06
Limk1-202ENSMUST00000111233 BlmO88700 1416 aa14.68□□□□□ -0.06
Limk1-202ENSMUST00000111233 Lmod2Q3UHZ5 550 aa14.66□□□□□ -0.06
Limk1-202ENSMUST00000111233 Kdm5bQ80Y84 1544 aa14.66□□□□□ -0.06
Limk1-202ENSMUST00000111233 Map3k1P53349 1493 aa14.66□□□□□ -0.06
Limk1-202ENSMUST00000111233 AqrQ8CFQ3 1481 aaKnown RBP14.66□□□□□ -0.06
Limk1-202ENSMUST00000111233 Tiam1Q60610 1591 aa14.65□□□□□ -0.06
Limk1-202ENSMUST00000111233 Baz1bQ9Z277 1479 aa14.65□□□□□ -0.06
Limk1-202ENSMUST00000111233 Fam50aQ9WV03 339 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms