RNA–Protein interactions for RNA: ENSMUST00000110357.1

Nphp1-202, Transcript of Nephrocystin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Nphp1, Length 2,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp1-202ENSMUST00000110357 NischQ80TM9 1593 aa38,2■■■■□ 3,71
Nphp1-202ENSMUST00000110357 Gm35339A0A140LHH9 1649 aa37,46■■■■□ 3,59
Nphp1-202ENSMUST00000110357 Abcc9P70170 1546 aa37,14■■■■□ 3,54
Nphp1-202ENSMUST00000110357 Abcc8B2RUS7 1588 aa36,2■■■■□ 3,39
Nphp1-202ENSMUST00000110357 Rhox8Q6VSS7 320 aa35,63■■■■□ 3,29
Nphp1-202ENSMUST00000110357 Rtl1Q7M732 1744 aa35,57■■■■□ 3,29
Nphp1-202ENSMUST00000110357 Ccdc180J3QNE4 1664 aa34,96■■■■□ 3,19
Nphp1-202ENSMUST00000110357 Zcchc6Q5BLK4 1491 aaKnown RBP34,16■■■■□ 3,06
Nphp1-202ENSMUST00000110357 Dcaf1Q80TR8 1506 aa33,86■■■■□ 3,01
Nphp1-202ENSMUST00000110357 ScribQ80U72 1612 aa33,58■■■□□ 2,97
Nphp1-202ENSMUST00000110357 Rpgrip1Q9EPQ2 1331 aa33,56■■■□□ 2,96
Nphp1-202ENSMUST00000110357 Rb1cc1Q9ESK9 1588 aa33,51■■■□□ 2,95
Nphp1-202ENSMUST00000110357 HrcG5E8J6 738 aa33,22■■■□□ 2,91
Nphp1-202ENSMUST00000110357 Baz1aO88379 1555 aa33,13■■■□□ 2,89
Nphp1-202ENSMUST00000110357 Kdm5dQ62240 1548 aa33,03■■■□□ 2,88
Nphp1-202ENSMUST00000110357 Ccdc136Q3TVA9 1136 aa33■■■□□ 2,87
Nphp1-202ENSMUST00000110357 Acin1Q9JIX8 1338 aaKnown RBP32,93■■■□□ 2,86
Nphp1-202ENSMUST00000110357 NacadQ5SWP3 1504 aa32,73■■■□□ 2,83
Nphp1-202ENSMUST00000110357 Ehmt2Q9Z148 1263 aaKnown RBP32,54■■■□□ 2,8
Nphp1-202ENSMUST00000110357 Crybg2B7ZCC2 1516 aa32,46■■■□□ 2,79
Nphp1-202ENSMUST00000110357 Trim41Q5NCC3 630 aa32,44■■■□□ 2,78
Nphp1-202ENSMUST00000110357 Smarca2Q6DIC0 1577 aa32,43■■■□□ 2,78
Nphp1-202ENSMUST00000110357 Cep164Q5DU05 1446 aa32,16■■■□□ 2,74
Nphp1-202ENSMUST00000110357 Sycp2Q9CUU3 1500 aa32■■■□□ 2,71
Nphp1-202ENSMUST00000110357 Pcgf6Q99NA9 353 aa31,67■■■□□ 2,66
Nphp1-202ENSMUST00000110357 Brd4Q9ESU6 1400 aaKnown RBP31,65■■■□□ 2,66
Nphp1-202ENSMUST00000110357 Rsf1E9PWW9 1441 aaKnown RBP31,61■■■□□ 2,65
Nphp1-202ENSMUST00000110357 Cngb1E1AZ71 1325 aa31,55■■■□□ 2,64
Nphp1-202ENSMUST00000110357 Chic1Q8CBW7 227 aa31,52■■■□□ 2,64
Nphp1-202ENSMUST00000110357 Cecr2E9Q2Z1 1453 aa31,51■■■□□ 2,63
Nphp1-202ENSMUST00000110357 Golga3P55937 1487 aa31,43■■■□□ 2,62
Nphp1-202ENSMUST00000110357 Synj1Q8CHC4 1574 aa31,36■■■□□ 2,61
Nphp1-202ENSMUST00000110357 Ccdc88bQ4QRL3 1481 aa31,35■■■□□ 2,61
Nphp1-202ENSMUST00000110357 Gab3Q8BSM5 595 aa31,32■■■□□ 2,6
Nphp1-202ENSMUST00000110357 BicraF8VPZ9 1578 aa31,25■■■□□ 2,59
Nphp1-202ENSMUST00000110357 CftrP26361 1476 aa31,11■■■□□ 2,57
Nphp1-202ENSMUST00000110357 Supt5hO55201 1082 aaKnown RBP31,1■■■□□ 2,57
Nphp1-202ENSMUST00000110357 Top2bQ64511 1612 aa31,05■■■□□ 2,56
Nphp1-202ENSMUST00000110357 Cttnbp2B9EJA2 1648 aa30,96■■■□□ 2,55
Nphp1-202ENSMUST00000110357 Esf1Q3V1V3 845 aaKnown RBP30,94■■■□□ 2,54
Nphp1-202ENSMUST00000110357 NefmP08553 848 aa30,89■■■□□ 2,53
Nphp1-202ENSMUST00000110357 Mier1Q5UAK0 511 aa30,84■■■□□ 2,53
Nphp1-202ENSMUST00000110357 Cc2d2aQ8CFW7 1633 aa30,73■■■□□ 2,51
Nphp1-202ENSMUST00000110357 Smarca4Q3TKT4 1613 aaKnown RBP30,71■■■□□ 2,51
Nphp1-202ENSMUST00000110357 Zeb1Q64318 1117 aa30,67■■■□□ 2,5
Nphp1-202ENSMUST00000110357 Rapgef2Q8CHG7 1496 aa30,59■■■□□ 2,49
Nphp1-202ENSMUST00000110357 Fmn1Q05860 1466 aa30,54■■■□□ 2,48
Nphp1-202ENSMUST00000110357 Top2aQ01320 1528 aaKnown RBP30,48■■■□□ 2,47
Nphp1-202ENSMUST00000110357 Neurod1Q60867 357 aa30,35■■■□□ 2,45
Nphp1-202ENSMUST00000110357 Cep162Q6ZQ06 1403 aa30,31■■■□□ 2,44
Nphp1-202ENSMUST00000110357 Sall2Q9QX96 1004 aa30,3■■■□□ 2,44
Nphp1-202ENSMUST00000110357 UbtfP25976 765 aaKnown RBP30,3■■■□□ 2,44
Nphp1-202ENSMUST00000110357 Iqgap2Q3UQ44 1575 aa30,25■■■□□ 2,43
Nphp1-202ENSMUST00000110357 Myt1lP97500 1187 aa30,12■■■□□ 2,41
Nphp1-202ENSMUST00000110357 Eif4g1Q6NZJ6 1600 aaKnown RBP30,06■■■□□ 2,4
Nphp1-202ENSMUST00000110357 Las1lA2BE28 776 aaKnown RBP30,03■■■□□ 2,4
Nphp1-202ENSMUST00000110357 Npm2Q80W85 207 aa30■■■□□ 2,39
Nphp1-202ENSMUST00000110357 Atad2bE9Q166 1460 aaKnown RBP29,99■■■□□ 2,39
Nphp1-202ENSMUST00000110357 TnnQ80Z71 1560 aa29,95■■■□□ 2,38
Nphp1-202ENSMUST00000110357 Clip1Q922J3 1391 aa29,91■■■□□ 2,38
Nphp1-202ENSMUST00000110357 Aebp2Q9Z248 504 aaKnown RBP29,88■■■□□ 2,37
Nphp1-202ENSMUST00000110357 Wdr66E9Q743 1299 aa29,87■■■□□ 2,37
Nphp1-202ENSMUST00000110357 ClspnQ80YR7 1315 aa29,77■■■□□ 2,36
Nphp1-202ENSMUST00000110357 Pds5bQ4VA53 1446 aaKnown RBP29,77■■■□□ 2,36
Nphp1-202ENSMUST00000110357 Plekhg3Q4VAC9 1341 aa29,75■■■□□ 2,35
Nphp1-202ENSMUST00000110357 Ncapd3Q6ZQK0 1506 aa29,74■■■□□ 2,35
Nphp1-202ENSMUST00000110357 Anks4bQ8K3X6 423 aa29,74■■■□□ 2,35
Nphp1-202ENSMUST00000110357 Arhgap35Q91YM2 1499 aa29,72■■■□□ 2,35
Nphp1-202ENSMUST00000110357 TonslQ6NZL6 1363 aa29,7■■■□□ 2,35
Nphp1-202ENSMUST00000110357 NrkQ9R0G8 1455 aa29,66■■■□□ 2,34
Nphp1-202ENSMUST00000110357 PtprkP35822 1457 aa29,61■■■□□ 2,33
Nphp1-202ENSMUST00000110357 Frmpd1A2AKB4 1549 aa29,6■■■□□ 2,33
Nphp1-202ENSMUST00000110357 Lamc3Q9R0B6 1581 aa29,59■■■□□ 2,33
Nphp1-202ENSMUST00000110357 Wdr62Q3U3T8 1523 aa29,58■■■□□ 2,33
Nphp1-202ENSMUST00000110357 Eea1Q8BL66 1411 aa29,55■■■□□ 2,32
Nphp1-202ENSMUST00000110357 Arap1Q4LDD4 1452 aa29,54■■■□□ 2,32
Nphp1-202ENSMUST00000110357 Cdk11bP24788 784 aaKnown RBP29,51■■■□□ 2,31
Nphp1-202ENSMUST00000110357 Nop58Q6DFW4 536 aaKnown RBP29,5■■■□□ 2,31
Nphp1-202ENSMUST00000110357 Shroom4Q1W617 1475 aa29,47■■■□□ 2,31
Nphp1-202ENSMUST00000110357 Arhgef5E9Q7D5 1581 aa29,45■■■□□ 2,31
Nphp1-202ENSMUST00000110357 Map3k1P53349 1493 aa29,43■■■□□ 2,3
Nphp1-202ENSMUST00000110357 Ccdc18Q640L5 1455 aa29,41■■■□□ 2,3
Nphp1-202ENSMUST00000110357 Camsap1A2AHC3 1581 aa29,4■■■□□ 2,3
Nphp1-202ENSMUST00000110357 Kif15Q6P9L6 1387 aa29,4■■■□□ 2,3
Nphp1-202ENSMUST00000110357 Ppargc1bQ8VHJ7 1014 aa29,4■■■□□ 2,3
Nphp1-202ENSMUST00000110357 Setd5Q5XJV7 1441 aa29,37■■■□□ 2,29
Nphp1-202ENSMUST00000110357 Il27Q8K3I6 234 aa29,35■■■□□ 2,29
Nphp1-202ENSMUST00000110357 Kdm5bQ80Y84 1544 aa29,34■■■□□ 2,29
Nphp1-202ENSMUST00000110357 Unc13aQ4KUS2 1712 aa29,33■■■□□ 2,29
Nphp1-202ENSMUST00000110357 Csrnp3P59055 597 aa29,33■■■□□ 2,29
Nphp1-202ENSMUST00000110357 Ap3b1Q9Z1T1 1105 aa29,3■■■□□ 2,28
Nphp1-202ENSMUST00000110357 Tiam1Q60610 1591 aa29,27■■■□□ 2,28
Nphp1-202ENSMUST00000110357 Ercc6F8VPZ5 1481 aa29,27■■■□□ 2,28
Nphp1-202ENSMUST00000110357 1700123L14RikQ3V2K7 440 aa29,24■■■□□ 2,27
Nphp1-202ENSMUST00000110357 Grin2bQ01097 1482 aa29,22■■■□□ 2,27
Nphp1-202ENSMUST00000110357 Erich3F6QRE9 1637 aa29,21■■■□□ 2,27
Nphp1-202ENSMUST00000110357 TchhA0A0B4J1F9 1599 aa29,19■■■□□ 2,26
Nphp1-202ENSMUST00000110357 Mroh2bQ7M6Y6 1581 aa29,19■■■□□ 2,26
Nphp1-202ENSMUST00000110357 Ankrd26Q811D2 1581 aa29,14■■■□□ 2,26
Nphp1-202ENSMUST00000110357 Naip1Q9QWK5 1403 aa29,13■■■□□ 2,25
Retrieved 100 of 22,080 RNA–protein pairs in 10,5 ms