RNA–Protein interactions for RNA: ENSMUST00000110288.8

Ebf4-203, Transcript of Transcription factor COE4, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ebf4, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4-203ENSMUST00000110288 NischQ80TM9 1593 aa43.24■■■■■ 4.51
Ebf4-203ENSMUST00000110288 Gm35339A0A140LHH9 1649 aa42.14■■■■■ 4.34
Ebf4-203ENSMUST00000110288 Abcc9P70170 1546 aa41.85■■■■■ 4.29
Ebf4-203ENSMUST00000110288 Rhox8Q6VSS7 320 aa41.13■■■■■ 4.18
Ebf4-203ENSMUST00000110288 Abcc8B2RUS7 1588 aa41.08■■■■■ 4.17
Ebf4-203ENSMUST00000110288 Rpgrip1Q9EPQ2 1331 aa40.66■■■■■ 4.1
Ebf4-203ENSMUST00000110288 Rtl1Q7M732 1744 aa40.32■■■■■ 4.04
Ebf4-203ENSMUST00000110288 Ehmt2Q9Z148 1263 aaKnown RBP39.89■■■■□ 3.98
Ebf4-203ENSMUST00000110288 Ccdc180J3QNE4 1664 aa39.87■■■■□ 3.97
Ebf4-203ENSMUST00000110288 Acin1Q9JIX8 1338 aaKnown RBP39.76■■■■□ 3.96
Ebf4-203ENSMUST00000110288 Pcgf6Q99NA9 353 aa39.36■■■■□ 3.89
Ebf4-203ENSMUST00000110288 Zcchc6Q5BLK4 1491 aaKnown RBP38.95■■■■□ 3.83
Ebf4-203ENSMUST00000110288 ScribQ80U72 1612 aa38.61■■■■□ 3.77
Ebf4-203ENSMUST00000110288 Supt5hO55201 1082 aaKnown RBP38.39■■■■□ 3.74
Ebf4-203ENSMUST00000110288 Ccdc136Q3TVA9 1136 aa38.1■■■■□ 3.69
Ebf4-203ENSMUST00000110288 Dcaf1Q80TR8 1506 aa38.09■■■■□ 3.69
Ebf4-203ENSMUST00000110288 Neurod1Q60867 357 aa38.05■■■■□ 3.68
Ebf4-203ENSMUST00000110288 HrcG5E8J6 738 aa38.02■■■■□ 3.68
Ebf4-203ENSMUST00000110288 Rb1cc1Q9ESK9 1588 aa37.89■■■■□ 3.66
Ebf4-203ENSMUST00000110288 Kdm5dQ62240 1548 aa37.86■■■■□ 3.65
Ebf4-203ENSMUST00000110288 Trim41Q5NCC3 630 aa37.85■■■■□ 3.65
Ebf4-203ENSMUST00000110288 Zeb1Q64318 1117 aa37.52■■■■□ 3.6
Ebf4-203ENSMUST00000110288 NacadQ5SWP3 1504 aa37.47■■■■□ 3.59
Ebf4-203ENSMUST00000110288 Baz1aO88379 1555 aa37.38■■■■□ 3.57
Ebf4-203ENSMUST00000110288 Las1lA2BE28 776 aaKnown RBP37.25■■■■□ 3.55
Ebf4-203ENSMUST00000110288 Cngb1E1AZ71 1325 aa37.07■■■■□ 3.53
Ebf4-203ENSMUST00000110288 1700123L14RikQ3V2K7 440 aa37.05■■■■□ 3.52
Ebf4-203ENSMUST00000110288 Csrnp3P59055 597 aa36.93■■■■□ 3.5
Ebf4-203ENSMUST00000110288 Sall2Q9QX96 1004 aa36.89■■■■□ 3.5
Ebf4-203ENSMUST00000110288 Cep164Q5DU05 1446 aa36.75■■■■□ 3.47
Ebf4-203ENSMUST00000110288 Sycp2Q9CUU3 1500 aa36.69■■■■□ 3.46
Ebf4-203ENSMUST00000110288 Smarca2Q6DIC0 1577 aa36.57■■■■□ 3.45
Ebf4-203ENSMUST00000110288 Anks4bQ8K3X6 423 aa36.56■■■■□ 3.44
Ebf4-203ENSMUST00000110288 Mier1Q5UAK0 511 aa36.5■■■■□ 3.43
Ebf4-203ENSMUST00000110288 Gab3Q8BSM5 595 aa36.48■■■■□ 3.43
Ebf4-203ENSMUST00000110288 NefmP08553 848 aa36.47■■■■□ 3.43
Ebf4-203ENSMUST00000110288 CenpbP27790 599 aa36.33■■■■□ 3.41
Ebf4-203ENSMUST00000110288 Crybg2B7ZCC2 1516 aa36.32■■■■□ 3.4
Ebf4-203ENSMUST00000110288 Gm38655A0A286YDK6 273 aa36.3■■■■□ 3.4
Ebf4-203ENSMUST00000110288 Wdr66E9Q743 1299 aa36.29■■■■□ 3.4
Ebf4-203ENSMUST00000110288 Chic1Q8CBW7 227 aa36.28■■■■□ 3.4
Ebf4-203ENSMUST00000110288 Ppargc1bQ8VHJ7 1014 aa36.24■■■■□ 3.39
Ebf4-203ENSMUST00000110288 Rsf1E9PWW9 1441 aaKnown RBP36.2■■■■□ 3.39
Ebf4-203ENSMUST00000110288 Aebp2Q9Z248 504 aaKnown RBP36.04■■■■□ 3.36
Ebf4-203ENSMUST00000110288 Cecr2E9Q2Z1 1453 aa36.04■■■■□ 3.36
Ebf4-203ENSMUST00000110288 BicraF8VPZ9 1578 aa36.03■■■■□ 3.36
Ebf4-203ENSMUST00000110288 Cdk11bP24788 784 aaKnown RBP36■■■■□ 3.35
Ebf4-203ENSMUST00000110288 Aplp2Q06335 707 aa35.94■■■■□ 3.34
Ebf4-203ENSMUST00000110288 Nop58Q6DFW4 536 aaKnown RBP35.94■■■■□ 3.34
Ebf4-203ENSMUST00000110288 Ccdc88bQ4QRL3 1481 aa35.88■■■■□ 3.33
Ebf4-203ENSMUST00000110288 Myt1Q8CFC2 1127 aa35.85■■■■□ 3.33
Ebf4-203ENSMUST00000110288 Brd4Q9ESU6 1400 aaKnown RBP35.83■■■■□ 3.33
Ebf4-203ENSMUST00000110288 Golga3P55937 1487 aa35.7■■■■□ 3.31
Ebf4-203ENSMUST00000110288 Esf1Q3V1V3 845 aaKnown RBP35.67■■■■□ 3.3
Ebf4-203ENSMUST00000110288 UbtfP25976 765 aaKnown RBP35.65■■■■□ 3.3
Ebf4-203ENSMUST00000110288 DiexfQ8BTT6 772 aaKnown RBP35.52■■■■□ 3.28
Ebf4-203ENSMUST00000110288 Synj1Q8CHC4 1574 aa35.52■■■■□ 3.28
Ebf4-203ENSMUST00000110288 ClspnQ80YR7 1315 aa35.51■■■■□ 3.28
Ebf4-203ENSMUST00000110288 Mapk8ip2Q9ERE9 830 aa35.25■■■■□ 3.23
Ebf4-203ENSMUST00000110288 CftrP26361 1476 aa35.24■■■■□ 3.23
Ebf4-203ENSMUST00000110288 Bcl11aQ9QYE3 773 aa35.22■■■■□ 3.23
Ebf4-203ENSMUST00000110288 Fam71e1A1L3C1 212 aa35.21■■■■□ 3.23
Ebf4-203ENSMUST00000110288 SafbD3YXK2 937 aaKnown RBP35.16■■■■□ 3.22
Ebf4-203ENSMUST00000110288 Top2bQ64511 1612 aa35.06■■■■□ 3.2
Ebf4-203ENSMUST00000110288 Smarca4Q3TKT4 1613 aaKnown RBP35.02■■■■□ 3.2
Ebf4-203ENSMUST00000110288 TonslQ6NZL6 1363 aa35.01■■■■□ 3.19
Ebf4-203ENSMUST00000110288 Hnrnpul2Q00PI9 745 aaKnown RBP35■■■■□ 3.19
Ebf4-203ENSMUST00000110288 Cc2d2aQ8CFW7 1633 aa34.89■■■■□ 3.18
Ebf4-203ENSMUST00000110288 Cttnbp2B9EJA2 1648 aa34.86■■■■□ 3.17
Ebf4-203ENSMUST00000110288 Myt1lP97500 1187 aa34.85■■■■□ 3.17
Ebf4-203ENSMUST00000110288 Ap3b1Q9Z1T1 1105 aa34.84■■■■□ 3.17
Ebf4-203ENSMUST00000110288 Rapgef2Q8CHG7 1496 aa34.79■■■■□ 3.16
Ebf4-203ENSMUST00000110288 Iqgap2Q3UQ44 1575 aa34.69■■■■□ 3.14
Ebf4-203ENSMUST00000110288 Ifnlr1Q8CGK5 535 aa34.66■■■■□ 3.14
Ebf4-203ENSMUST00000110288 Cep162Q6ZQ06 1403 aa34.59■■■■□ 3.13
Ebf4-203ENSMUST00000110288 Fmn1Q05860 1466 aa34.57■■■■□ 3.12
Ebf4-203ENSMUST00000110288 Atad2bE9Q166 1460 aaKnown RBP34.56■■■■□ 3.12
Ebf4-203ENSMUST00000110288 Top2aQ01320 1528 aaKnown RBP34.53■■■■□ 3.12
Ebf4-203ENSMUST00000110288 Npm2Q80W85 207 aa34.52■■■■□ 3.12
Ebf4-203ENSMUST00000110288 PrkcshO08795 521 aa34.52■■■■□ 3.12
Ebf4-203ENSMUST00000110288 Pds5bQ4VA53 1446 aaKnown RBP34.48■■■■□ 3.11
Ebf4-203ENSMUST00000110288 Tnnt3Q9QZ47 272 aa34.47■■■■□ 3.11
Ebf4-203ENSMUST00000110288 Eid3Q3V124 375 aa34.44■■■■□ 3.1
Ebf4-203ENSMUST00000110288 Plekhg3Q4VAC9 1341 aa34.44■■■■□ 3.1
Ebf4-203ENSMUST00000110288 Clip1Q922J3 1391 aa34.31■■■■□ 3.08
Ebf4-203ENSMUST00000110288 Il27Q8K3I6 234 aa34.29■■■■□ 3.08
Ebf4-203ENSMUST00000110288 Anp32aO35381 247 aa34.21■■■■□ 3.07
Ebf4-203ENSMUST00000110288 Frmpd1A2AKB4 1549 aa34.14■■■■□ 3.06
Ebf4-203ENSMUST00000110288 Nolc1E9Q5C9 702 aaKnown RBP34.06■■■■□ 3.04
Ebf4-203ENSMUST00000110288 Ncapd3Q6ZQK0 1506 aa34.03■■■■□ 3.04
Ebf4-203ENSMUST00000110288 Eif4g1Q6NZJ6 1600 aaKnown RBP33.99■■■■□ 3.03
Ebf4-203ENSMUST00000110288 Wdr62Q3U3T8 1523 aa33.98■■■■□ 3.03
Ebf4-203ENSMUST00000110288 Ercc6F8VPZ5 1481 aa33.97■■■■□ 3.03
Ebf4-203ENSMUST00000110288 Znf710Q3U288 666 aa33.97■■■■□ 3.03
Ebf4-203ENSMUST00000110288 Kif15Q6P9L6 1387 aa33.91■■■■□ 3.02
Ebf4-203ENSMUST00000110288 Slc24a1Q91WD8 1130 aa33.85■■■■□ 3.01
Ebf4-203ENSMUST00000110288 Calr4Q3TQS0 420 aa33.84■■■■□ 3.01
Ebf4-203ENSMUST00000110288 Ttbk1Q6PCN3 1308 aa33.82■■■■□ 3
Ebf4-203ENSMUST00000110288 Arhgap35Q91YM2 1499 aa33.8■■■■□ 3
Ebf4-203ENSMUST00000110288 PtprkP35822 1457 aa33.74■■■□□ 2.99
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms