RNA–Protein interactions for RNA: ENSMUST00000109502.8

Ccdc85a-204, Transcript of Coiled-coil domain-containing protein 85A, mousemouse

TSL 1 (best) BASIC

Gene Ccdc85a, Length 5,220 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85a-204ENSMUST00000109502 Rhox8Q6VSS7 320 aa22.39■■□□□ 1.18
Ccdc85a-204ENSMUST00000109502 Rpgrip1Q9EPQ2 1331 aa21.28■■□□□ 1
Ccdc85a-204ENSMUST00000109502 Cngb1E1AZ71 1325 aa20.81■□□□□ 0.92
Ccdc85a-204ENSMUST00000109502 Las1lA2BE28 776 aaKnown RBP20.72■□□□□ 0.91
Ccdc85a-204ENSMUST00000109502 Pelp1Q9DBD5 1123 aaKnown RBP20.41■□□□□ 0.86
Ccdc85a-204ENSMUST00000109502 Ehmt2Q9Z148 1263 aaKnown RBP20.29■□□□□ 0.84
Ccdc85a-204ENSMUST00000109502 Wdr66E9Q743 1299 aa20.13■□□□□ 0.81
Ccdc85a-204ENSMUST00000109502 Zeb1Q64318 1117 aa19.81■□□□□ 0.76
Ccdc85a-204ENSMUST00000109502 Ube2uB1AUC4 352 aa19.76■□□□□ 0.75
Ccdc85a-204ENSMUST00000109502 Esf1Q3V1V3 845 aaKnown RBP19.68■□□□□ 0.74
Ccdc85a-204ENSMUST00000109502 CenpbP27790 599 aa19.65■□□□□ 0.74
Ccdc85a-204ENSMUST00000109502 Ccdc136Q3TVA9 1136 aa19.62■□□□□ 0.73
Ccdc85a-204ENSMUST00000109502 Amer1Q7TS75 1132 aa19.6■□□□□ 0.73
Ccdc85a-204ENSMUST00000109502 NischQ80TM9 1593 aa19.51■□□□□ 0.71
Ccdc85a-204ENSMUST00000109502 Trim41Q5NCC3 630 aa19.49■□□□□ 0.71
Ccdc85a-204ENSMUST00000109502 Gab3Q8BSM5 595 aa19.46■□□□□ 0.71
Ccdc85a-204ENSMUST00000109502 Npm2Q80W85 207 aa19.38■□□□□ 0.69
Ccdc85a-204ENSMUST00000109502 Stra8P70278 393 aa19.34■□□□□ 0.69
Ccdc85a-204ENSMUST00000109502 Acin1Q9JIX8 1338 aaKnown RBP19.27■□□□□ 0.68
Ccdc85a-204ENSMUST00000109502 NefmP08553 848 aa19.27■□□□□ 0.68
Ccdc85a-204ENSMUST00000109502 Myt1lP97500 1187 aa19.18■□□□□ 0.66
Ccdc85a-204ENSMUST00000109502 4930567H17RikQ3V0K5 233 aa19.11■□□□□ 0.65
Ccdc85a-204ENSMUST00000109502 Myt1Q8CFC2 1127 aa19.1■□□□□ 0.65
Ccdc85a-204ENSMUST00000109502 Slc24a1Q91WD8 1130 aa18.94■□□□□ 0.62
Ccdc85a-204ENSMUST00000109502 UbtfP25976 765 aaKnown RBP18.91■□□□□ 0.62
Ccdc85a-204ENSMUST00000109502 Cdk11bP24788 784 aaKnown RBP18.89■□□□□ 0.61
Ccdc85a-204ENSMUST00000109502 4933416C03RikQ3V063 378 aa18.8■□□□□ 0.6
Ccdc85a-204ENSMUST00000109502 Tnnt3Q9QZ47 272 aa18.79■□□□□ 0.6
Ccdc85a-204ENSMUST00000109502 Ttbk1Q6PCN3 1308 aa18.78■□□□□ 0.6
Ccdc85a-204ENSMUST00000109502 Anp32bQ9EST5 272 aaKnown RBP18.66■□□□□ 0.58
Ccdc85a-204ENSMUST00000109502 Pcgf6Q99NA9 353 aa18.65■□□□□ 0.58
Ccdc85a-204ENSMUST00000109502 NrdcQ8BHG1 1161 aa18.65■□□□□ 0.58
Ccdc85a-204ENSMUST00000109502 NeflP08551 543 aa18.61■□□□□ 0.57
Ccdc85a-204ENSMUST00000109502 Nop58Q6DFW4 536 aaKnown RBP18.59■□□□□ 0.57
Ccdc85a-204ENSMUST00000109502 HrcG5E8J6 738 aa18.55■□□□□ 0.56
Ccdc85a-204ENSMUST00000109502 Rtl5Q5DTT4 599 aa18.53■□□□□ 0.56
Ccdc85a-204ENSMUST00000109502 Ccdc180J3QNE4 1664 aa18.48■□□□□ 0.55
Ccdc85a-204ENSMUST00000109502 NclP09405 707 aaKnown RBP18.41■□□□□ 0.54
Ccdc85a-204ENSMUST00000109502 Eif5bQ05D44 1216 aaKnown RBP18.39■□□□□ 0.53
Ccdc85a-204ENSMUST00000109502 Il27Q8K3I6 234 aa18.36■□□□□ 0.53
Ccdc85a-204ENSMUST00000109502 Fam50aQ9WV03 339 aaKnown RBP18.31■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Rtl1Q7M732 1744 aa18.3■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Neurod1Q60867 357 aa18.29■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Zcchc6Q5BLK4 1491 aaKnown RBP18.27■□□□□ 0.52
Ccdc85a-204ENSMUST00000109502 Abcc9P70170 1546 aa18.23■□□□□ 0.51
Ccdc85a-204ENSMUST00000109502 TonslQ6NZL6 1363 aa18.22■□□□□ 0.51
Ccdc85a-204ENSMUST00000109502 Supt5hO55201 1082 aaKnown RBP18.2■□□□□ 0.5
Ccdc85a-204ENSMUST00000109502 Os9Q8K2C7 672 aa18.2■□□□□ 0.5
Ccdc85a-204ENSMUST00000109502 DiexfQ8BTT6 772 aaKnown RBP18.12■□□□□ 0.49
Ccdc85a-204ENSMUST00000109502 Ppargc1bQ8VHJ7 1014 aa18.12■□□□□ 0.49
Ccdc85a-204ENSMUST00000109502 Ap3b1Q9Z1T1 1105 aa18.09■□□□□ 0.49
Ccdc85a-204ENSMUST00000109502 Anp32aO35381 247 aa18.06■□□□□ 0.48
Ccdc85a-204ENSMUST00000109502 DaxxO35613 739 aa18■□□□□ 0.47
Ccdc85a-204ENSMUST00000109502 Gm35339A0A140LHH9 1649 aa17.92■□□□□ 0.46
Ccdc85a-204ENSMUST00000109502 ClspnQ80YR7 1315 aa17.92■□□□□ 0.46
Ccdc85a-204ENSMUST00000109502 Mier1Q5UAK0 511 aa17.91■□□□□ 0.46
Ccdc85a-204ENSMUST00000109502 Npm1Q61937 292 aaKnown RBP17.85■□□□□ 0.45
Ccdc85a-204ENSMUST00000109502 Abcc8B2RUS7 1588 aa17.74■□□□□ 0.43
Ccdc85a-204ENSMUST00000109502 Nlrp6Q91WS2 869 aa17.64■□□□□ 0.41
Ccdc85a-204ENSMUST00000109502 Anks4bQ8K3X6 423 aa17.62■□□□□ 0.41
Ccdc85a-204ENSMUST00000109502 Aplp2Q06335 707 aa17.6■□□□□ 0.41
Ccdc85a-204ENSMUST00000109502 Hnrnpul2Q00PI9 745 aaKnown RBP17.56■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Lmod2Q3UHZ5 550 aa17.56■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Zbtb7cQ8VCZ7 619 aa17.56■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Brd4Q9ESU6 1400 aaKnown RBP17.55■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Plekhg3Q4VAC9 1341 aa17.53■□□□□ 0.4
Ccdc85a-204ENSMUST00000109502 Polr3glQ8R0C0 218 aa17.52■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Hdac5Q9Z2V6 1113 aa17.52■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Upf2A2AT37 1269 aaKnown RBP17.5■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 CatipB9EKE5 520 aa17.5■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Ccdc9Q8VC31 543 aaKnown RBP17.49■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 ArxO35085 564 aa17.48■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Csrnp3P59055 597 aa17.48■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Gm13697A2AK42 830 aa17.48■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Gm38655A0A286YDK6 273 aa17.46■□□□□ 0.39
Ccdc85a-204ENSMUST00000109502 Calr4Q3TQS0 420 aa17.44■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Ythdc1E9Q5K9 736 aaKnown RBP17.44■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Chic1Q8CBW7 227 aa17.44■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Zbtb4Q5F293 982 aa17.43■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Sall2Q9QX96 1004 aa17.42■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Mapk8ip2Q9ERE9 830 aa17.42■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Ppp4r2Q0VGB7 417 aa17.4■□□□□ 0.38
Ccdc85a-204ENSMUST00000109502 Ccer2J3QPU5 274 aa17.38■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Erich6D3Z6S9 713 aa17.37■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Atp1b4Q99ME6 356 aa17.36■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Hsp90aa1P07901 733 aaKnown RBP17.34■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Eid3Q3V124 375 aa17.34■□□□□ 0.37
Ccdc85a-204ENSMUST00000109502 Wdr43Q6ZQL4 677 aaKnown RBP17.33■□□□□ 0.36
Ccdc85a-204ENSMUST00000109502 Prdm10Q3UTQ7 1184 aa17.32■□□□□ 0.36
Ccdc85a-204ENSMUST00000109502 Lmod3E9QA62 571 aa17.24■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Clip1Q922J3 1391 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Ubl4bQ9CQ84 188 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Trim44Q9QXA7 346 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Ifnlr1Q8CGK5 535 aa17.23■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Cep164Q5DU05 1446 aa17.21■□□□□ 0.35
Ccdc85a-204ENSMUST00000109502 Gm13695A2AK44 830 aa17.21■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 Dcaf1Q80TR8 1506 aa17.2■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 DekQ7TNV0 380 aaKnown RBP17.2■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 Rb1cc1Q9ESK9 1588 aa17.17■□□□□ 0.34
Ccdc85a-204ENSMUST00000109502 Mrs2Q5NCE8 434 aa17.16■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 13.8 ms