RNA–Protein interactions for RNA: ENSMUST00000108830.1

Def8-204, Transcript of Differentially expressed in FDCP 8, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Def8, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Def8-204ENSMUST00000108830 Gm35339A0A140LHH9 1649 aa16.83■□□□□ 0.28
Def8-204ENSMUST00000108830 NischQ80TM9 1593 aa16.11■□□□□ 0.17
Def8-204ENSMUST00000108830 Abcc9P70170 1546 aa15.89■□□□□ 0.13
Def8-204ENSMUST00000108830 Abcc8B2RUS7 1588 aa15.58■□□□□ 0.08
Def8-204ENSMUST00000108830 Dcaf1Q80TR8 1506 aa14.98□□□□□ -0.01
Def8-204ENSMUST00000108830 Ccdc180J3QNE4 1664 aa14.9□□□□□ -0.02
Def8-204ENSMUST00000108830 Rhox8Q6VSS7 320 aa14.78□□□□□ -0.04
Def8-204ENSMUST00000108830 Rpgrip1Q9EPQ2 1331 aa14.74□□□□□ -0.05
Def8-204ENSMUST00000108830 ScribQ80U72 1612 aa14.69□□□□□ -0.06
Def8-204ENSMUST00000108830 Ehmt2Q9Z148 1263 aaKnown RBP14.66□□□□□ -0.06
Def8-204ENSMUST00000108830 Pcgf6Q99NA9 353 aa14.53□□□□□ -0.08
Def8-204ENSMUST00000108830 Rtl1Q7M732 1744 aa14.53□□□□□ -0.08
Def8-204ENSMUST00000108830 Acin1Q9JIX8 1338 aaKnown RBP14.42□□□□□ -0.1
Def8-204ENSMUST00000108830 Crybg2B7ZCC2 1516 aa14.35□□□□□ -0.11
Def8-204ENSMUST00000108830 NacadQ5SWP3 1504 aa14.32□□□□□ -0.12
Def8-204ENSMUST00000108830 Kdm5dQ62240 1548 aa14.21□□□□□ -0.13
Def8-204ENSMUST00000108830 Supt5hO55201 1082 aaKnown RBP14.14□□□□□ -0.15
Def8-204ENSMUST00000108830 Neurod1Q60867 357 aa14.13□□□□□ -0.15
Def8-204ENSMUST00000108830 Baz1aO88379 1555 aa14.08□□□□□ -0.16
Def8-204ENSMUST00000108830 Rb1cc1Q9ESK9 1588 aa14.07□□□□□ -0.16
Def8-204ENSMUST00000108830 Sycp2Q9CUU3 1500 aa14.01□□□□□ -0.17
Def8-204ENSMUST00000108830 1700123L14RikQ3V2K7 440 aa13.83□□□□□ -0.2
Def8-204ENSMUST00000108830 Zcchc6Q5BLK4 1491 aaKnown RBP13.83□□□□□ -0.2
Def8-204ENSMUST00000108830 Las1lA2BE28 776 aaKnown RBP13.78□□□□□ -0.2
Def8-204ENSMUST00000108830 Smarca2Q6DIC0 1577 aa13.78□□□□□ -0.2
Def8-204ENSMUST00000108830 Zeb1Q64318 1117 aa13.75□□□□□ -0.21
Def8-204ENSMUST00000108830 Csrnp3P59055 597 aa13.75□□□□□ -0.21
Def8-204ENSMUST00000108830 Ccdc136Q3TVA9 1136 aa13.74□□□□□ -0.21
Def8-204ENSMUST00000108830 Trim41Q5NCC3 630 aa13.74□□□□□ -0.21
Def8-204ENSMUST00000108830 BicraF8VPZ9 1578 aa13.68□□□□□ -0.22
Def8-204ENSMUST00000108830 Gm38655A0A286YDK6 273 aa13.63□□□□□ -0.23
Def8-204ENSMUST00000108830 CenpbP27790 599 aa13.63□□□□□ -0.23
Def8-204ENSMUST00000108830 DiexfQ8BTT6 772 aaKnown RBP13.6□□□□□ -0.23
Def8-204ENSMUST00000108830 Cngb1E1AZ71 1325 aa13.55□□□□□ -0.24
Def8-204ENSMUST00000108830 Sall2Q9QX96 1004 aa13.48□□□□□ -0.25
Def8-204ENSMUST00000108830 HrcG5E8J6 738 aa13.42□□□□□ -0.26
Def8-204ENSMUST00000108830 Anks4bQ8K3X6 423 aa13.4□□□□□ -0.26
Def8-204ENSMUST00000108830 Bcl11aQ9QYE3 773 aa13.4□□□□□ -0.26
Def8-204ENSMUST00000108830 Ppargc1bQ8VHJ7 1014 aa13.38□□□□□ -0.27
Def8-204ENSMUST00000108830 Myt1Q8CFC2 1127 aa13.33□□□□□ -0.28
Def8-204ENSMUST00000108830 Baz1bQ9Z277 1479 aa13.32□□□□□ -0.28
Def8-204ENSMUST00000108830 Smarca4Q3TKT4 1613 aaKnown RBP13.3□□□□□ -0.28
Def8-204ENSMUST00000108830 Cttnbp2B9EJA2 1648 aa13.27□□□□□ -0.28
Def8-204ENSMUST00000108830 PrkcshO08795 521 aa13.26□□□□□ -0.29
Def8-204ENSMUST00000108830 Wdr66E9Q743 1299 aa13.24□□□□□ -0.29
Def8-204ENSMUST00000108830 Aplp2Q06335 707 aa13.24□□□□□ -0.29
Def8-204ENSMUST00000108830 Ifnlr1Q8CGK5 535 aa13.19□□□□□ -0.3
Def8-204ENSMUST00000108830 Brd4Q9ESU6 1400 aaKnown RBP13.18□□□□□ -0.3
Def8-204ENSMUST00000108830 Atad2bE9Q166 1460 aaKnown RBP13.16□□□□□ -0.3
Def8-204ENSMUST00000108830 Pds5bQ4VA53 1446 aaKnown RBP13.15□□□□□ -0.3
Def8-204ENSMUST00000108830 Cdk11bP24788 784 aaKnown RBP13.15□□□□□ -0.3
Def8-204ENSMUST00000108830 Cecr2E9Q2Z1 1453 aa13.12□□□□□ -0.31
Def8-204ENSMUST00000108830 Mapk8ip2Q9ERE9 830 aa13.12□□□□□ -0.31
Def8-204ENSMUST00000108830 Nop58Q6DFW4 536 aaKnown RBP13.12□□□□□ -0.31
Def8-204ENSMUST00000108830 Top2bQ64511 1612 aa13.11□□□□□ -0.31
Def8-204ENSMUST00000108830 Mier1Q5UAK0 511 aa13.11□□□□□ -0.31
Def8-204ENSMUST00000108830 Fam71e1A1L3C1 212 aa13.1□□□□□ -0.31
Def8-204ENSMUST00000108830 Aebp2Q9Z248 504 aaKnown RBP13.1□□□□□ -0.31
Def8-204ENSMUST00000108830 Iqgap2Q3UQ44 1575 aa13.06□□□□□ -0.32
Def8-204ENSMUST00000108830 Thoc2B1AZI6 1594 aaKnown RBP13.06□□□□□ -0.32
Def8-204ENSMUST00000108830 CftrP26361 1476 aa13.06□□□□□ -0.32
Def8-204ENSMUST00000108830 NefmP08553 848 aa13.04□□□□□ -0.32
Def8-204ENSMUST00000108830 Chic1Q8CBW7 227 aa13.04□□□□□ -0.32
Def8-204ENSMUST00000108830 Synj1Q8CHC4 1574 aa13.04□□□□□ -0.32
Def8-204ENSMUST00000108830 Cep164Q5DU05 1446 aa13.03□□□□□ -0.32
Def8-204ENSMUST00000108830 SafbD3YXK2 937 aaKnown RBP13.02□□□□□ -0.33
Def8-204ENSMUST00000108830 Gab3Q8BSM5 595 aa13□□□□□ -0.33
Def8-204ENSMUST00000108830 Rsf1E9PWW9 1441 aaKnown RBP12.97□□□□□ -0.33
Def8-204ENSMUST00000108830 Wdr62Q3U3T8 1523 aa12.97□□□□□ -0.33
Def8-204ENSMUST00000108830 TnnQ80Z71 1560 aa12.96□□□□□ -0.34
Def8-204ENSMUST00000108830 Esf1Q3V1V3 845 aaKnown RBP12.93□□□□□ -0.34
Def8-204ENSMUST00000108830 Ccdc88bQ4QRL3 1481 aa12.91□□□□□ -0.34
Def8-204ENSMUST00000108830 Golga3P55937 1487 aa12.9□□□□□ -0.35
Def8-204ENSMUST00000108830 Unc13aQ4KUS2 1712 aa12.89□□□□□ -0.35
Def8-204ENSMUST00000108830 Fam135aQ6NS59 1506 aa12.88□□□□□ -0.35
Def8-204ENSMUST00000108830 Hnrnpul2Q00PI9 745 aaKnown RBP12.85□□□□□ -0.35
Def8-204ENSMUST00000108830 Amer1Q7TS75 1132 aa12.82□□□□□ -0.36
Def8-204ENSMUST00000108830 Lamc3Q9R0B6 1581 aa12.81□□□□□ -0.36
Def8-204ENSMUST00000108830 Ap3b1Q9Z1T1 1105 aa12.79□□□□□ -0.36
Def8-204ENSMUST00000108830 ClspnQ80YR7 1315 aa12.78□□□□□ -0.36
Def8-204ENSMUST00000108830 Frmpd1A2AKB4 1549 aa12.78□□□□□ -0.36
Def8-204ENSMUST00000108830 Ttbk1Q6PCN3 1308 aa12.78□□□□□ -0.36
Def8-204ENSMUST00000108830 UbtfP25976 765 aaKnown RBP12.76□□□□□ -0.37
Def8-204ENSMUST00000108830 Ercc6F8VPZ5 1481 aa12.74□□□□□ -0.37
Def8-204ENSMUST00000108830 Gpatch8A2A6A1 1505 aa12.73□□□□□ -0.37
Def8-204ENSMUST00000108830 Fmn1Q05860 1466 aa12.73□□□□□ -0.37
Def8-204ENSMUST00000108830 Top2aQ01320 1528 aaKnown RBP12.65□□□□□ -0.38
Def8-204ENSMUST00000108830 Cc2d2aQ8CFW7 1633 aa12.64□□□□□ -0.39
Def8-204ENSMUST00000108830 Eif4g1Q6NZJ6 1600 aaKnown RBP12.57□□□□□ -0.4
Def8-204ENSMUST00000108830 Hdac5Q9Z2V6 1113 aa12.57□□□□□ -0.4
Def8-204ENSMUST00000108830 Phldb1Q6PDH0 1371 aaKnown RBP12.56□□□□□ -0.4
Def8-204ENSMUST00000108830 Nolc1E9Q5C9 702 aaKnown RBP12.54□□□□□ -0.4
Def8-204ENSMUST00000108830 Anp32aO35381 247 aa12.53□□□□□ -0.4
Def8-204ENSMUST00000108830 TonslQ6NZL6 1363 aa12.52□□□□□ -0.41
Def8-204ENSMUST00000108830 Myt1lP97500 1187 aa12.51□□□□□ -0.41
Def8-204ENSMUST00000108830 Tnnt3Q9QZ47 272 aa12.48□□□□□ -0.41
Def8-204ENSMUST00000108830 Rapgef2Q8CHG7 1496 aa12.48□□□□□ -0.41
Def8-204ENSMUST00000108830 Camsap1A2AHC3 1581 aa12.47□□□□□ -0.41
Def8-204ENSMUST00000108830 Il27Q8K3I6 234 aa12.47□□□□□ -0.41
Def8-204ENSMUST00000108830 Npm2Q80W85 207 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms