RNA–Protein interactions for RNA: ENSMUST00000107473.2

Rara-202, Transcript of Retinoic acid receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Rara, Length 3,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rara-202ENSMUST00000107473 NischQ80TM9 1593 aa31.06■■■□□ 2.56
Rara-202ENSMUST00000107473 Rhox8Q6VSS7 320 aa30.24■■■□□ 2.43
Rara-202ENSMUST00000107473 Abcc9P70170 1546 aa29.89■■■□□ 2.38
Rara-202ENSMUST00000107473 Gm35339A0A140LHH9 1649 aa29.6■■■□□ 2.33
Rara-202ENSMUST00000107473 Abcc8B2RUS7 1588 aa29.26■■■□□ 2.28
Rara-202ENSMUST00000107473 Ehmt2Q9Z148 1263 aaKnown RBP28.22■■■□□ 2.11
Rara-202ENSMUST00000107473 Rtl1Q7M732 1744 aa28.1■■■□□ 2.09
Rara-202ENSMUST00000107473 Ccdc136Q3TVA9 1136 aa28.1■■■□□ 2.09
Rara-202ENSMUST00000107473 Ccdc180J3QNE4 1664 aa28.02■■■□□ 2.08
Rara-202ENSMUST00000107473 Zcchc6Q5BLK4 1491 aaKnown RBP27.59■■■□□ 2.01
Rara-202ENSMUST00000107473 Rb1cc1Q9ESK9 1588 aa27.25■■□□□ 1.95
Rara-202ENSMUST00000107473 ScribQ80U72 1612 aa27.24■■□□□ 1.95
Rara-202ENSMUST00000107473 Trim41Q5NCC3 630 aa27.16■■□□□ 1.94
Rara-202ENSMUST00000107473 Acin1Q9JIX8 1338 aaKnown RBP27.1■■□□□ 1.93
Rara-202ENSMUST00000107473 Rpgrip1Q9EPQ2 1331 aa27.09■■□□□ 1.93
Rara-202ENSMUST00000107473 Dcaf1Q80TR8 1506 aa27.01■■□□□ 1.91
Rara-202ENSMUST00000107473 HrcG5E8J6 738 aa27■■□□□ 1.91
Rara-202ENSMUST00000107473 Kdm5dQ62240 1548 aa26.89■■□□□ 1.9
Rara-202ENSMUST00000107473 Gab3Q8BSM5 595 aa26.8■■□□□ 1.88
Rara-202ENSMUST00000107473 Cngb1E1AZ71 1325 aa26.76■■□□□ 1.87
Rara-202ENSMUST00000107473 Baz1aO88379 1555 aa26.73■■□□□ 1.87
Rara-202ENSMUST00000107473 Chic1Q8CBW7 227 aa26.46■■□□□ 1.83
Rara-202ENSMUST00000107473 NacadQ5SWP3 1504 aa26.44■■□□□ 1.82
Rara-202ENSMUST00000107473 Pcgf6Q99NA9 353 aa26.42■■□□□ 1.82
Rara-202ENSMUST00000107473 Esf1Q3V1V3 845 aaKnown RBP26.19■■□□□ 1.78
Rara-202ENSMUST00000107473 Supt5hO55201 1082 aaKnown RBP26.16■■□□□ 1.78
Rara-202ENSMUST00000107473 Zeb1Q64318 1117 aa26.16■■□□□ 1.78
Rara-202ENSMUST00000107473 Cep164Q5DU05 1446 aa26.15■■□□□ 1.78
Rara-202ENSMUST00000107473 Smarca2Q6DIC0 1577 aa26.1■■□□□ 1.77
Rara-202ENSMUST00000107473 Rsf1E9PWW9 1441 aaKnown RBP26.09■■□□□ 1.77
Rara-202ENSMUST00000107473 Cecr2E9Q2Z1 1453 aa25.99■■□□□ 1.75
Rara-202ENSMUST00000107473 Ccdc88bQ4QRL3 1481 aa25.93■■□□□ 1.74
Rara-202ENSMUST00000107473 Sycp2Q9CUU3 1500 aa25.88■■□□□ 1.73
Rara-202ENSMUST00000107473 Mier1Q5UAK0 511 aa25.8■■□□□ 1.72
Rara-202ENSMUST00000107473 Myt1lP97500 1187 aa25.73■■□□□ 1.71
Rara-202ENSMUST00000107473 Brd4Q9ESU6 1400 aaKnown RBP25.73■■□□□ 1.71
Rara-202ENSMUST00000107473 UbtfP25976 765 aaKnown RBP25.73■■□□□ 1.71
Rara-202ENSMUST00000107473 Crybg2B7ZCC2 1516 aa25.71■■□□□ 1.71
Rara-202ENSMUST00000107473 Synj1Q8CHC4 1574 aa25.61■■□□□ 1.69
Rara-202ENSMUST00000107473 Ppargc1bQ8VHJ7 1014 aa25.61■■□□□ 1.69
Rara-202ENSMUST00000107473 Golga3P55937 1487 aa25.6■■□□□ 1.69
Rara-202ENSMUST00000107473 Neurod1Q60867 357 aa25.43■■□□□ 1.66
Rara-202ENSMUST00000107473 Sall2Q9QX96 1004 aa25.41■■□□□ 1.66
Rara-202ENSMUST00000107473 BicraF8VPZ9 1578 aa25.39■■□□□ 1.65
Rara-202ENSMUST00000107473 Wdr66E9Q743 1299 aa25.38■■□□□ 1.65
Rara-202ENSMUST00000107473 Npm2Q80W85 207 aa25.37■■□□□ 1.65
Rara-202ENSMUST00000107473 CftrP26361 1476 aa25.35■■□□□ 1.65
Rara-202ENSMUST00000107473 NefmP08553 848 aa25.31■■□□□ 1.64
Rara-202ENSMUST00000107473 Plekhg3Q4VAC9 1341 aa25.21■■□□□ 1.63
Rara-202ENSMUST00000107473 Aebp2Q9Z248 504 aaKnown RBP25.16■■□□□ 1.62
Rara-202ENSMUST00000107473 Il27Q8K3I6 234 aa25.16■■□□□ 1.62
Rara-202ENSMUST00000107473 Cc2d2aQ8CFW7 1633 aa25.12■■□□□ 1.61
Rara-202ENSMUST00000107473 Ap3b1Q9Z1T1 1105 aa25.11■■□□□ 1.61
Rara-202ENSMUST00000107473 Las1lA2BE28 776 aaKnown RBP25.02■■□□□ 1.6
Rara-202ENSMUST00000107473 Top2bQ64511 1612 aa24.94■■□□□ 1.58
Rara-202ENSMUST00000107473 Rapgef2Q8CHG7 1496 aa24.92■■□□□ 1.58
Rara-202ENSMUST00000107473 Cttnbp2B9EJA2 1648 aa24.92■■□□□ 1.58
Rara-202ENSMUST00000107473 Eid3Q3V124 375 aa24.84■■□□□ 1.57
Rara-202ENSMUST00000107473 Smarca4Q3TKT4 1613 aaKnown RBP24.84■■□□□ 1.57
Rara-202ENSMUST00000107473 Cep162Q6ZQ06 1403 aa24.84■■□□□ 1.57
Rara-202ENSMUST00000107473 Clip1Q922J3 1391 aa24.8■■□□□ 1.56
Rara-202ENSMUST00000107473 Fmn1Q05860 1466 aa24.74■■□□□ 1.55
Rara-202ENSMUST00000107473 Csrnp3P59055 597 aa24.71■■□□□ 1.55
Rara-202ENSMUST00000107473 TonslQ6NZL6 1363 aa24.69■■□□□ 1.54
Rara-202ENSMUST00000107473 Gm38655A0A286YDK6 273 aa24.64■■□□□ 1.54
Rara-202ENSMUST00000107473 Mapk8ip2Q9ERE9 830 aa24.64■■□□□ 1.54
Rara-202ENSMUST00000107473 Top2aQ01320 1528 aaKnown RBP24.64■■□□□ 1.53
Rara-202ENSMUST00000107473 Nop58Q6DFW4 536 aaKnown RBP24.61■■□□□ 1.53
Rara-202ENSMUST00000107473 Iqgap2Q3UQ44 1575 aa24.6■■□□□ 1.53
Rara-202ENSMUST00000107473 Cdk11bP24788 784 aaKnown RBP24.56■■□□□ 1.52
Rara-202ENSMUST00000107473 ClspnQ80YR7 1315 aa24.54■■□□□ 1.52
Rara-202ENSMUST00000107473 Lmod2Q3UHZ5 550 aa24.52■■□□□ 1.52
Rara-202ENSMUST00000107473 PtprkP35822 1457 aa24.47■■□□□ 1.51
Rara-202ENSMUST00000107473 Fam50aQ9WV03 339 aaKnown RBP24.44■■□□□ 1.5
Rara-202ENSMUST00000107473 1700123L14RikQ3V2K7 440 aa24.41■■□□□ 1.5
Rara-202ENSMUST00000107473 Anks4bQ8K3X6 423 aa24.41■■□□□ 1.5
Rara-202ENSMUST00000107473 Kif15Q6P9L6 1387 aa24.39■■□□□ 1.5
Rara-202ENSMUST00000107473 Setd5Q5XJV7 1441 aa24.34■■□□□ 1.49
Rara-202ENSMUST00000107473 Atad2bE9Q166 1460 aaKnown RBP24.32■■□□□ 1.48
Rara-202ENSMUST00000107473 Arhgap35Q91YM2 1499 aa24.28■■□□□ 1.48
Rara-202ENSMUST00000107473 Arap1Q4LDD4 1452 aa24.23■■□□□ 1.47
Rara-202ENSMUST00000107473 Eea1Q8BL66 1411 aa24.22■■□□□ 1.47
Rara-202ENSMUST00000107473 Ncapd3Q6ZQK0 1506 aa24.2■■□□□ 1.46
Rara-202ENSMUST00000107473 BlmO88700 1416 aa24.19■■□□□ 1.46
Rara-202ENSMUST00000107473 Frmpd1A2AKB4 1549 aa24.17■■□□□ 1.46
Rara-202ENSMUST00000107473 Ube2uB1AUC4 352 aa24.16■■□□□ 1.46
Rara-202ENSMUST00000107473 Pds5bQ4VA53 1446 aaKnown RBP24.15■■□□□ 1.46
Rara-202ENSMUST00000107473 NclP09405 707 aaKnown RBP24.1■■□□□ 1.45
Rara-202ENSMUST00000107473 Npm1Q61937 292 aaKnown RBP24.05■■□□□ 1.44
Rara-202ENSMUST00000107473 AqrQ8CFQ3 1481 aaKnown RBP24.05■■□□□ 1.44
Rara-202ENSMUST00000107473 Eif4g1Q6NZJ6 1600 aaKnown RBP24.04■■□□□ 1.44
Rara-202ENSMUST00000107473 Ubl4bQ9CQ84 188 aa24.03■■□□□ 1.44
Rara-202ENSMUST00000107473 Baz1bQ9Z277 1479 aa23.99■■□□□ 1.43
Rara-202ENSMUST00000107473 Slc24a1Q91WD8 1130 aa23.98■■□□□ 1.43
Rara-202ENSMUST00000107473 SafbD3YXK2 937 aaKnown RBP23.96■■□□□ 1.43
Rara-202ENSMUST00000107473 Chic2Q9D9G3 165 aa23.95■■□□□ 1.42
Rara-202ENSMUST00000107473 Wdr62Q3U3T8 1523 aa23.94■■□□□ 1.42
Rara-202ENSMUST00000107473 TnnQ80Z71 1560 aa23.94■■□□□ 1.42
Rara-202ENSMUST00000107473 Shroom4Q1W617 1475 aa23.94■■□□□ 1.42
Rara-202ENSMUST00000107473 Hspa5P20029 655 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms