RNA–Protein interactions for RNA: ENSMUST00000103001.3

Ssx9-201, Transcript of MCG116991, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssx9, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9-201ENSMUST00000103001 Chic1Q8CBW7 227 aa18.38■□□□□ 0.53
Ssx9-201ENSMUST00000103001 Mapk8ip2Q9ERE9 830 aa18.01■□□□□ 0.47
Ssx9-201ENSMUST00000103001 Phf23Q8BSN5 401 aa16.54■□□□□ 0.24
Ssx9-201ENSMUST00000103001 Plppr3Q7TPB0 716 aa16.02■□□□□ 0.16
Ssx9-201ENSMUST00000103001 Gab3Q8BSM5 595 aa15.86■□□□□ 0.13
Ssx9-201ENSMUST00000103001 Senp3Q9EP97 568 aaKnown RBP15.2■□□□□ 0.02
Ssx9-201ENSMUST00000103001 Kcna4Q61423 654 aa14.68□□□□□ -0.06
Ssx9-201ENSMUST00000103001 Fam163aQ8CAA5 168 aa13.49□□□□□ -0.25
Ssx9-201ENSMUST00000103001 Trap1aP19473 224 aa13.41□□□□□ -0.26
Ssx9-201ENSMUST00000103001 Hoxd11P23813 323 aa13.37□□□□□ -0.27
Ssx9-201ENSMUST00000103001 Dmrt2Q8BG36 561 aa13.13□□□□□ -0.31
Ssx9-201ENSMUST00000103001 Ppargc1bQ8VHJ7 1014 aa12.94□□□□□ -0.34
Ssx9-201ENSMUST00000103001 Znf219Q6IQX8 726 aa12.83□□□□□ -0.36
Ssx9-201ENSMUST00000103001 Chrna2Q91X60 512 aa12.69□□□□□ -0.38
Ssx9-201ENSMUST00000103001 Slc4a1apE9PX68 744 aa12.62□□□□□ -0.39
Ssx9-201ENSMUST00000103001 Rsph4aQ8BYM7 716 aa12.58□□□□□ -0.4
Ssx9-201ENSMUST00000103001 Atf5O70191 283 aa12.44□□□□□ -0.42
Ssx9-201ENSMUST00000103001 Dnajc5bQ9CQ94 199 aa12.44□□□□□ -0.42
Ssx9-201ENSMUST00000103001 ArsiQ32KI9 573 aa12.43□□□□□ -0.42
Ssx9-201ENSMUST00000103001 Rimbp2Q80U40 1072 aa12.41□□□□□ -0.42
Ssx9-201ENSMUST00000103001 Ppp4r2Q0VGB7 417 aa12.31□□□□□ -0.44
Ssx9-201ENSMUST00000103001 Hs6st3Q9QYK4 470 aa12.3□□□□□ -0.44
Ssx9-201ENSMUST00000103001 Akt1s1Q9D1F4 257 aa12.13□□□□□ -0.47
Ssx9-201ENSMUST00000103001 Ube2uB1AUC4 352 aa12.05□□□□□ -0.48
Ssx9-201ENSMUST00000103001 1700123L14RikQ3V2K7 440 aa12.02□□□□□ -0.49
Ssx9-201ENSMUST00000103001 Slc34a2Q9DBP0 697 aa11.93□□□□□ -0.5
Ssx9-201ENSMUST00000103001 Bach1P97302 739 aa11.83□□□□□ -0.52
Ssx9-201ENSMUST00000103001 Sox12Q04890 314 aa11.7□□□□□ -0.54
Ssx9-201ENSMUST00000103001 Fam71e1A1L3C1 212 aa11.64□□□□□ -0.55
Ssx9-201ENSMUST00000103001 WdpcpQ8C456 722 aa11.54□□□□□ -0.56
Ssx9-201ENSMUST00000103001 Cdca7Q9D0M2 382 aa11.51□□□□□ -0.57
Ssx9-201ENSMUST00000103001 Nlrp6Q91WS2 869 aa11.5□□□□□ -0.57
Ssx9-201ENSMUST00000103001 C1qtnf12Q8R2Z0 308 aa11.43□□□□□ -0.58
Ssx9-201ENSMUST00000103001 AcrbpQ3V140 540 aa11.31□□□□□ -0.6
Ssx9-201ENSMUST00000103001 Pde4cQ3UEI1 686 aa11.28□□□□□ -0.6
Ssx9-201ENSMUST00000103001 Riok3Q9DBU3 519 aaKnown RBP11.19□□□□□ -0.62
Ssx9-201ENSMUST00000103001 Npm2Q80W85 207 aa11.17□□□□□ -0.62
Ssx9-201ENSMUST00000103001 GapdhsQ64467 440 aa11.14□□□□□ -0.63
Ssx9-201ENSMUST00000103001 Ifnlr1Q8CGK5 535 aa11.14□□□□□ -0.63
Ssx9-201ENSMUST00000103001 G430095P16RikE9Q913 147 aa11.13□□□□□ -0.63
Ssx9-201ENSMUST00000103001 Znf704Q9ERQ3 566 aa11.12□□□□□ -0.63
Ssx9-201ENSMUST00000103001 MyclP10166 368 aa11.1□□□□□ -0.63
Ssx9-201ENSMUST00000103001 Ms4a5Q810P8 197 aa11.09□□□□□ -0.63
Ssx9-201ENSMUST00000103001 Slc4a5E9Q3M5 1116 aa11.08□□□□□ -0.64
Ssx9-201ENSMUST00000103001 Prm3Q62100 101 aa11.08□□□□□ -0.64
Ssx9-201ENSMUST00000103001 Egfem1Q8C088 590 aa11.08□□□□□ -0.64
Ssx9-201ENSMUST00000103001 Zbtb7aO88939 569 aaKnown RBP11.07□□□□□ -0.64
Ssx9-201ENSMUST00000103001 Trim41Q5NCC3 630 aa11.06□□□□□ -0.64
Ssx9-201ENSMUST00000103001 Rtn4Q99P72 1162 aaKnown RBP11.03□□□□□ -0.64
Ssx9-201ENSMUST00000103001 Grwd1Q810D6 446 aaKnown RBP11.01□□□□□ -0.65
Ssx9-201ENSMUST00000103001 Ehmt2Q9Z148 1263 aaKnown RBP11□□□□□ -0.65
Ssx9-201ENSMUST00000103001 Tshz2Q68FE9 1030 aa10.93□□□□□ -0.66
Ssx9-201ENSMUST00000103001 Zbtb12Q9Z150 459 aa10.93□□□□□ -0.66
Ssx9-201ENSMUST00000103001 Styxl1Q9DAR2 321 aa10.91□□□□□ -0.66
Ssx9-201ENSMUST00000103001 Rnf216P58283 853 aa10.87□□□□□ -0.67
Ssx9-201ENSMUST00000103001 Abcb7Q61102 752 aaKnown RBP10.84□□□□□ -0.67
Ssx9-201ENSMUST00000103001 Gtpbp6Q3U6U5 514 aa10.81□□□□□ -0.68
Ssx9-201ENSMUST00000103001 Nkx1-1G3UXB3 402 aa10.68□□□□□ -0.7
Ssx9-201ENSMUST00000103001 Fbln2P37889 1221 aa10.66□□□□□ -0.7
Ssx9-201ENSMUST00000103001 Npm3Q9CPP0 175 aaKnown RBP10.6□□□□□ -0.71
Ssx9-201ENSMUST00000103001 MpndQ3TV65 487 aa10.59□□□□□ -0.71
Ssx9-201ENSMUST00000103001 Tcf3P15806 651 aa10.47□□□□□ -0.73
Ssx9-201ENSMUST00000103001 Skida1Q80YR3 822 aa10.45□□□□□ -0.74
Ssx9-201ENSMUST00000103001 Ecm2Q5FW85 670 aa10.4□□□□□ -0.74
Ssx9-201ENSMUST00000103001 Znf703P0CL69 594 aa10.37□□□□□ -0.75
Ssx9-201ENSMUST00000103001 Ppp1r37Q8BKR5 712 aa10.37□□□□□ -0.75
Ssx9-201ENSMUST00000103001 Cacnb1Q8R3Z5 597 aa10.36□□□□□ -0.75
Ssx9-201ENSMUST00000103001 Kcnn1Q9EQR3 537 aa10.36□□□□□ -0.75
Ssx9-201ENSMUST00000103001 Prr29B1ARI9 187 aa10.33□□□□□ -0.76
Ssx9-201ENSMUST00000103001 Ildr2B5TVM2 661 aa10.31□□□□□ -0.76
Ssx9-201ENSMUST00000103001 Prdm10Q3UTQ7 1184 aa10.27□□□□□ -0.77
Ssx9-201ENSMUST00000103001 Pitpnm1O35954 1243 aa10.23□□□□□ -0.77
Ssx9-201ENSMUST00000103001 Lrrc43Q3V0L5 667 aa10.22□□□□□ -0.77
Ssx9-201ENSMUST00000103001 Jarid2Q62315 1234 aa10.17□□□□□ -0.78
Ssx9-201ENSMUST00000103001 Trim35Q8C006 501 aa10.15□□□□□ -0.78
Ssx9-201ENSMUST00000103001 Cadps2Q8BYR5 1297 aa10.08□□□□□ -0.8
Ssx9-201ENSMUST00000103001 Pip4p2Q9CZX7 257 aa10.08□□□□□ -0.8
Ssx9-201ENSMUST00000103001 Kank3Q9Z1P7 791 aa10.08□□□□□ -0.8
Ssx9-201ENSMUST00000103001 Clcn6O35454 870 aa10.07□□□□□ -0.8
Ssx9-201ENSMUST00000103001 Nyap1Q6PFX7 833 aa10.02□□□□□ -0.81
Ssx9-201ENSMUST00000103001 MycnP03966 462 aaKnown RBP9.97□□□□□ -0.81
Ssx9-201ENSMUST00000103001 Hnrnpul2Q00PI9 745 aaKnown RBP9.96□□□□□ -0.82
Ssx9-201ENSMUST00000103001 Sra1Q80VJ2 232 aa9.96□□□□□ -0.82
Ssx9-201ENSMUST00000103001 Spock2Q9ER58 423 aa9.91□□□□□ -0.82
Ssx9-201ENSMUST00000103001 Ppp6r1Q7TSI3 856 aa9.88□□□□□ -0.83
Ssx9-201ENSMUST00000103001 Arid3aQ62431 601 aa9.87□□□□□ -0.83
Ssx9-201ENSMUST00000103001 Hdac5Q9Z2V6 1113 aa9.86□□□□□ -0.83
Ssx9-201ENSMUST00000103001 Taok2Q6ZQ29 1240 aa9.85□□□□□ -0.83
Ssx9-201ENSMUST00000103001 Pde4dQ01063 747 aa9.84□□□□□ -0.83
Ssx9-201ENSMUST00000103001 SnphQ80U23 495 aa9.84□□□□□ -0.83
Ssx9-201ENSMUST00000103001 Prdm16A2A935 1275 aa9.83□□□□□ -0.84
Ssx9-201ENSMUST00000103001 Repin1Q5U4E2 545 aa9.83□□□□□ -0.84
Ssx9-201ENSMUST00000103001 Fam117bQ3U3E2 584 aa9.82□□□□□ -0.84
Ssx9-201ENSMUST00000103001 CatipB9EKE5 520 aa9.81□□□□□ -0.84
Ssx9-201ENSMUST00000103001 Dok7Q18PE0 504 aa9.76□□□□□ -0.85
Ssx9-201ENSMUST00000103001 Zbtb7bQ64321 544 aa9.74□□□□□ -0.85
Ssx9-201ENSMUST00000103001 Ferd3lQ923Z4 168 aa9.73□□□□□ -0.85
Ssx9-201ENSMUST00000103001 Gm13697A2AK42 830 aa9.71□□□□□ -0.86
Ssx9-201ENSMUST00000103001 PygbQ8CI94 843 aaKnown RBP9.7□□□□□ -0.86
Ssx9-201ENSMUST00000103001 Zbtb22Q9Z0G7 638 aa9.7□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 8.1 ms