RNA–Protein interactions for RNA: ENSMUST00000102677.10

Chn1-202, Transcript of N-chimaerin, mousemouse

TSL 1 (best) BASIC

Gene Chn1, Length 3,760 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chn1-202ENSMUST00000102677 Rpgrip1Q9EPQ2 1331 aa12.12□□□□□ -0.47
Chn1-202ENSMUST00000102677 Acin1Q9JIX8 1338 aaKnown RBP11.73□□□□□ -0.53
Chn1-202ENSMUST00000102677 NischQ80TM9 1593 aa11.68□□□□□ -0.54
Chn1-202ENSMUST00000102677 Rhox8Q6VSS7 320 aa11.67□□□□□ -0.54
Chn1-202ENSMUST00000102677 Pcgf6Q99NA9 353 aa11.65□□□□□ -0.55
Chn1-202ENSMUST00000102677 Rtl1Q7M732 1744 aa11.62□□□□□ -0.55
Chn1-202ENSMUST00000102677 Ccdc180J3QNE4 1664 aa11.59□□□□□ -0.55
Chn1-202ENSMUST00000102677 Ehmt2Q9Z148 1263 aaKnown RBP11.58□□□□□ -0.55
Chn1-202ENSMUST00000102677 Gm35339A0A140LHH9 1649 aa11.52□□□□□ -0.57
Chn1-202ENSMUST00000102677 Abcc9P70170 1546 aa11.32□□□□□ -0.6
Chn1-202ENSMUST00000102677 Supt5hO55201 1082 aaKnown RBP11.3□□□□□ -0.6
Chn1-202ENSMUST00000102677 Neurod1Q60867 357 aa11.27□□□□□ -0.6
Chn1-202ENSMUST00000102677 Las1lA2BE28 776 aaKnown RBP11.19□□□□□ -0.62
Chn1-202ENSMUST00000102677 Dcaf1Q80TR8 1506 aa11.17□□□□□ -0.62
Chn1-202ENSMUST00000102677 Trim41Q5NCC3 630 aa11.17□□□□□ -0.62
Chn1-202ENSMUST00000102677 Zcchc6Q5BLK4 1491 aaKnown RBP11.11□□□□□ -0.63
Chn1-202ENSMUST00000102677 1700123L14RikQ3V2K7 440 aa11.03□□□□□ -0.64
Chn1-202ENSMUST00000102677 HrcG5E8J6 738 aa10.98□□□□□ -0.65
Chn1-202ENSMUST00000102677 Zeb1Q64318 1117 aa10.97□□□□□ -0.65
Chn1-202ENSMUST00000102677 CenpbP27790 599 aa10.97□□□□□ -0.65
Chn1-202ENSMUST00000102677 Csrnp3P59055 597 aa10.94□□□□□ -0.66
Chn1-202ENSMUST00000102677 Cngb1E1AZ71 1325 aa10.9□□□□□ -0.66
Chn1-202ENSMUST00000102677 Myt1Q8CFC2 1127 aa10.9□□□□□ -0.67
Chn1-202ENSMUST00000102677 Abcc8B2RUS7 1588 aa10.89□□□□□ -0.67
Chn1-202ENSMUST00000102677 Anks4bQ8K3X6 423 aa10.84□□□□□ -0.67
Chn1-202ENSMUST00000102677 DiexfQ8BTT6 772 aaKnown RBP10.82□□□□□ -0.68
Chn1-202ENSMUST00000102677 Sall2Q9QX96 1004 aa10.81□□□□□ -0.68
Chn1-202ENSMUST00000102677 Ccdc136Q3TVA9 1136 aa10.75□□□□□ -0.69
Chn1-202ENSMUST00000102677 Aplp2Q06335 707 aa10.72□□□□□ -0.69
Chn1-202ENSMUST00000102677 Gm38655A0A286YDK6 273 aa10.7□□□□□ -0.7
Chn1-202ENSMUST00000102677 NefmP08553 848 aa10.69□□□□□ -0.7
Chn1-202ENSMUST00000102677 Bcl11aQ9QYE3 773 aa10.66□□□□□ -0.7
Chn1-202ENSMUST00000102677 ScribQ80U72 1612 aa10.63□□□□□ -0.71
Chn1-202ENSMUST00000102677 Wdr66E9Q743 1299 aa10.62□□□□□ -0.71
Chn1-202ENSMUST00000102677 Cdk11bP24788 784 aaKnown RBP10.62□□□□□ -0.71
Chn1-202ENSMUST00000102677 Mier1Q5UAK0 511 aa10.6□□□□□ -0.71
Chn1-202ENSMUST00000102677 Nop58Q6DFW4 536 aaKnown RBP10.58□□□□□ -0.72
Chn1-202ENSMUST00000102677 Cep164Q5DU05 1446 aa10.52□□□□□ -0.73
Chn1-202ENSMUST00000102677 Ppargc1bQ8VHJ7 1014 aa10.51□□□□□ -0.73
Chn1-202ENSMUST00000102677 Aebp2Q9Z248 504 aaKnown RBP10.5□□□□□ -0.73
Chn1-202ENSMUST00000102677 Fam71e1A1L3C1 212 aa10.45□□□□□ -0.74
Chn1-202ENSMUST00000102677 Gab3Q8BSM5 595 aa10.44□□□□□ -0.74
Chn1-202ENSMUST00000102677 ClspnQ80YR7 1315 aa10.43□□□□□ -0.74
Chn1-202ENSMUST00000102677 PrkcshO08795 521 aa10.42□□□□□ -0.74
Chn1-202ENSMUST00000102677 Mapk8ip2Q9ERE9 830 aa10.4□□□□□ -0.74
Chn1-202ENSMUST00000102677 Ifnlr1Q8CGK5 535 aa10.35□□□□□ -0.75
Chn1-202ENSMUST00000102677 SafbD3YXK2 937 aaKnown RBP10.35□□□□□ -0.75
Chn1-202ENSMUST00000102677 Rb1cc1Q9ESK9 1588 aa10.3□□□□□ -0.76
Chn1-202ENSMUST00000102677 Hnrnpul2Q00PI9 745 aaKnown RBP10.29□□□□□ -0.76
Chn1-202ENSMUST00000102677 UbtfP25976 765 aaKnown RBP10.28□□□□□ -0.76
Chn1-202ENSMUST00000102677 Chic1Q8CBW7 227 aa10.26□□□□□ -0.77
Chn1-202ENSMUST00000102677 Rsf1E9PWW9 1441 aaKnown RBP10.22□□□□□ -0.77
Chn1-202ENSMUST00000102677 Amer1Q7TS75 1132 aa10.21□□□□□ -0.77
Chn1-202ENSMUST00000102677 Tnnt3Q9QZ47 272 aa10.21□□□□□ -0.77
Chn1-202ENSMUST00000102677 TonslQ6NZL6 1363 aa10.2□□□□□ -0.78
Chn1-202ENSMUST00000102677 Ap3b1Q9Z1T1 1105 aa10.18□□□□□ -0.78
Chn1-202ENSMUST00000102677 Anp32aO35381 247 aa10.15□□□□□ -0.78
Chn1-202ENSMUST00000102677 Baz1aO88379 1555 aa10.14□□□□□ -0.79
Chn1-202ENSMUST00000102677 Rtl5Q5DTT4 599 aa10.09□□□□□ -0.79
Chn1-202ENSMUST00000102677 Ttbk1Q6PCN3 1308 aa10.08□□□□□ -0.8
Chn1-202ENSMUST00000102677 Ccdc88bQ4QRL3 1481 aa10.07□□□□□ -0.8
Chn1-202ENSMUST00000102677 Pelp1Q9DBD5 1123 aaKnown RBP10.07□□□□□ -0.8
Chn1-202ENSMUST00000102677 Kdm5dQ62240 1548 aa10.04□□□□□ -0.8
Chn1-202ENSMUST00000102677 Nolc1E9Q5C9 702 aaKnown RBP10.03□□□□□ -0.8
Chn1-202ENSMUST00000102677 Hdac5Q9Z2V6 1113 aa10.02□□□□□ -0.81
Chn1-202ENSMUST00000102677 NacadQ5SWP3 1504 aa10□□□□□ -0.81
Chn1-202ENSMUST00000102677 Supt16hQ920B9 1047 aa9.97□□□□□ -0.81
Chn1-202ENSMUST00000102677 Calr4Q3TQS0 420 aa9.96□□□□□ -0.81
Chn1-202ENSMUST00000102677 Znf710Q3U288 666 aa9.96□□□□□ -0.81
Chn1-202ENSMUST00000102677 Smarca2Q6DIC0 1577 aa9.95□□□□□ -0.82
Chn1-202ENSMUST00000102677 BicraF8VPZ9 1578 aa9.94□□□□□ -0.82
Chn1-202ENSMUST00000102677 Stra8P70278 393 aa9.93□□□□□ -0.82
Chn1-202ENSMUST00000102677 Eid3Q3V124 375 aa9.92□□□□□ -0.82
Chn1-202ENSMUST00000102677 Myt1lP97500 1187 aa9.92□□□□□ -0.82
Chn1-202ENSMUST00000102677 Sycp2Q9CUU3 1500 aa9.89□□□□□ -0.83
Chn1-202ENSMUST00000102677 Golga3P55937 1487 aa9.89□□□□□ -0.83
Chn1-202ENSMUST00000102677 Plekhg3Q4VAC9 1341 aa9.87□□□□□ -0.83
Chn1-202ENSMUST00000102677 Ppp4r2Q0VGB7 417 aa9.87□□□□□ -0.83
Chn1-202ENSMUST00000102677 Il27Q8K3I6 234 aa9.87□□□□□ -0.83
Chn1-202ENSMUST00000102677 Upf2A2AT37 1269 aaKnown RBP9.86□□□□□ -0.83
Chn1-202ENSMUST00000102677 Dnajc5bQ9CQ94 199 aa9.85□□□□□ -0.83
Chn1-202ENSMUST00000102677 Slc24a1Q91WD8 1130 aa9.84□□□□□ -0.83
Chn1-202ENSMUST00000102677 Gtf3c3Q3TMP1 882 aa9.84□□□□□ -0.83
Chn1-202ENSMUST00000102677 Rpap1Q80TE0 1409 aa9.84□□□□□ -0.83
Chn1-202ENSMUST00000102677 Wdr43Q6ZQL4 677 aaKnown RBP9.83□□□□□ -0.84
Chn1-202ENSMUST00000102677 Fgd1P52734 960 aa9.82□□□□□ -0.84
Chn1-202ENSMUST00000102677 Plcd4Q8K3R3 807 aa9.82□□□□□ -0.84
Chn1-202ENSMUST00000102677 Brd4Q9ESU6 1400 aaKnown RBP9.8□□□□□ -0.84
Chn1-202ENSMUST00000102677 Ccdc27Q3V036 639 aa9.8□□□□□ -0.84
Chn1-202ENSMUST00000102677 Pak3Q61036 559 aa9.8□□□□□ -0.84
Chn1-202ENSMUST00000102677 Esf1Q3V1V3 845 aaKnown RBP9.8□□□□□ -0.84
Chn1-202ENSMUST00000102677 Pknox2Q8BG99 474 aa9.8□□□□□ -0.84
Chn1-202ENSMUST00000102677 Ncapd3Q6ZQK0 1506 aa9.79□□□□□ -0.84
Chn1-202ENSMUST00000102677 Thoc2B1AZI6 1594 aaKnown RBP9.79□□□□□ -0.84
Chn1-202ENSMUST00000102677 Eif5bQ05D44 1216 aaKnown RBP9.77□□□□□ -0.84
Chn1-202ENSMUST00000102677 NclP09405 707 aaKnown RBP9.77□□□□□ -0.85
Chn1-202ENSMUST00000102677 Irx3P81067 507 aa9.77□□□□□ -0.85
Chn1-202ENSMUST00000102677 NrdcQ8BHG1 1161 aa9.76□□□□□ -0.85
Chn1-202ENSMUST00000102677 Rapgef2Q8CHG7 1496 aa9.76□□□□□ -0.85
Chn1-202ENSMUST00000102677 Clip1Q922J3 1391 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms