RNA–Protein interactions for RNA: ENSMUST00000101326.9

Ebf1-202, Transcript of Transcription factor COE1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ebf1, Length 3,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1-202ENSMUST00000101326 NischQ80TM9 1593 aa23.35■■□□□ 1.33
Ebf1-202ENSMUST00000101326 Rhox8Q6VSS7 320 aa22.79■■□□□ 1.24
Ebf1-202ENSMUST00000101326 Abcc9P70170 1546 aa22.6■■□□□ 1.21
Ebf1-202ENSMUST00000101326 Gm35339A0A140LHH9 1649 aa22.31■■□□□ 1.16
Ebf1-202ENSMUST00000101326 Rpgrip1Q9EPQ2 1331 aa22.26■■□□□ 1.15
Ebf1-202ENSMUST00000101326 Rtl1Q7M732 1744 aa22.25■■□□□ 1.15
Ebf1-202ENSMUST00000101326 Ccdc180J3QNE4 1664 aa22.13■■□□□ 1.13
Ebf1-202ENSMUST00000101326 Abcc8B2RUS7 1588 aa21.94■■□□□ 1.1
Ebf1-202ENSMUST00000101326 Ehmt2Q9Z148 1263 aaKnown RBP21.81■■□□□ 1.08
Ebf1-202ENSMUST00000101326 Acin1Q9JIX8 1338 aaKnown RBP21.79■■□□□ 1.08
Ebf1-202ENSMUST00000101326 Zcchc6Q5BLK4 1491 aaKnown RBP21.48■■□□□ 1.03
Ebf1-202ENSMUST00000101326 Pcgf6Q99NA9 353 aa21.39■■□□□ 1.02
Ebf1-202ENSMUST00000101326 HrcG5E8J6 738 aa21.14■□□□□ 0.97
Ebf1-202ENSMUST00000101326 Dcaf1Q80TR8 1506 aa21.11■□□□□ 0.97
Ebf1-202ENSMUST00000101326 Ccdc136Q3TVA9 1136 aa21.08■□□□□ 0.96
Ebf1-202ENSMUST00000101326 Supt5hO55201 1082 aaKnown RBP20.92■□□□□ 0.94
Ebf1-202ENSMUST00000101326 Trim41Q5NCC3 630 aa20.79■□□□□ 0.92
Ebf1-202ENSMUST00000101326 Neurod1Q60867 357 aa20.63■□□□□ 0.89
Ebf1-202ENSMUST00000101326 Rb1cc1Q9ESK9 1588 aa20.52■□□□□ 0.87
Ebf1-202ENSMUST00000101326 Zeb1Q64318 1117 aa20.52■□□□□ 0.87
Ebf1-202ENSMUST00000101326 Cep164Q5DU05 1446 aa20.31■□□□□ 0.84
Ebf1-202ENSMUST00000101326 Cngb1E1AZ71 1325 aa20.28■□□□□ 0.84
Ebf1-202ENSMUST00000101326 Gab3Q8BSM5 595 aa20.26■□□□□ 0.83
Ebf1-202ENSMUST00000101326 Baz1aO88379 1555 aa20.22■□□□□ 0.83
Ebf1-202ENSMUST00000101326 Las1lA2BE28 776 aaKnown RBP20.21■□□□□ 0.83
Ebf1-202ENSMUST00000101326 Sall2Q9QX96 1004 aa20.18■□□□□ 0.82
Ebf1-202ENSMUST00000101326 ScribQ80U72 1612 aa20.16■□□□□ 0.82
Ebf1-202ENSMUST00000101326 Mier1Q5UAK0 511 aa20.14■□□□□ 0.82
Ebf1-202ENSMUST00000101326 NefmP08553 848 aa20.13■□□□□ 0.81
Ebf1-202ENSMUST00000101326 Chic1Q8CBW7 227 aa20.07■□□□□ 0.8
Ebf1-202ENSMUST00000101326 1700123L14RikQ3V2K7 440 aa20.02■□□□□ 0.8
Ebf1-202ENSMUST00000101326 Csrnp3P59055 597 aa20■□□□□ 0.79
Ebf1-202ENSMUST00000101326 Kdm5dQ62240 1548 aa19.97■□□□□ 0.79
Ebf1-202ENSMUST00000101326 Rsf1E9PWW9 1441 aaKnown RBP19.94■□□□□ 0.78
Ebf1-202ENSMUST00000101326 Anks4bQ8K3X6 423 aa19.93■□□□□ 0.78
Ebf1-202ENSMUST00000101326 Wdr66E9Q743 1299 aa19.89■□□□□ 0.78
Ebf1-202ENSMUST00000101326 Smarca2Q6DIC0 1577 aa19.8■□□□□ 0.76
Ebf1-202ENSMUST00000101326 Ppargc1bQ8VHJ7 1014 aa19.79■□□□□ 0.76
Ebf1-202ENSMUST00000101326 Aebp2Q9Z248 504 aaKnown RBP19.77■□□□□ 0.76
Ebf1-202ENSMUST00000101326 Ccdc88bQ4QRL3 1481 aa19.73■□□□□ 0.75
Ebf1-202ENSMUST00000101326 UbtfP25976 765 aaKnown RBP19.72■□□□□ 0.75
Ebf1-202ENSMUST00000101326 Cdk11bP24788 784 aaKnown RBP19.69■□□□□ 0.74
Ebf1-202ENSMUST00000101326 Nop58Q6DFW4 536 aaKnown RBP19.66■□□□□ 0.74
Ebf1-202ENSMUST00000101326 NacadQ5SWP3 1504 aa19.65■□□□□ 0.74
Ebf1-202ENSMUST00000101326 Gm38655A0A286YDK6 273 aa19.63■□□□□ 0.73
Ebf1-202ENSMUST00000101326 CenpbP27790 599 aa19.56■□□□□ 0.72
Ebf1-202ENSMUST00000101326 Aplp2Q06335 707 aa19.55■□□□□ 0.72
Ebf1-202ENSMUST00000101326 ClspnQ80YR7 1315 aa19.54■□□□□ 0.72
Ebf1-202ENSMUST00000101326 Crybg2B7ZCC2 1516 aa19.52■□□□□ 0.71
Ebf1-202ENSMUST00000101326 Golga3P55937 1487 aa19.5■□□□□ 0.71
Ebf1-202ENSMUST00000101326 Brd4Q9ESU6 1400 aaKnown RBP19.47■□□□□ 0.71
Ebf1-202ENSMUST00000101326 Esf1Q3V1V3 845 aaKnown RBP19.46■□□□□ 0.71
Ebf1-202ENSMUST00000101326 Cecr2E9Q2Z1 1453 aa19.37■□□□□ 0.69
Ebf1-202ENSMUST00000101326 Myt1Q8CFC2 1127 aa19.36■□□□□ 0.69
Ebf1-202ENSMUST00000101326 Myt1lP97500 1187 aa19.35■□□□□ 0.69
Ebf1-202ENSMUST00000101326 TonslQ6NZL6 1363 aa19.34■□□□□ 0.69
Ebf1-202ENSMUST00000101326 Synj1Q8CHC4 1574 aa19.27■□□□□ 0.68
Ebf1-202ENSMUST00000101326 Sycp2Q9CUU3 1500 aa19.21■□□□□ 0.67
Ebf1-202ENSMUST00000101326 Plekhg3Q4VAC9 1341 aa19.14■□□□□ 0.66
Ebf1-202ENSMUST00000101326 SafbD3YXK2 937 aaKnown RBP19.11■□□□□ 0.65
Ebf1-202ENSMUST00000101326 Mapk8ip2Q9ERE9 830 aa19.11■□□□□ 0.65
Ebf1-202ENSMUST00000101326 Hnrnpul2Q00PI9 745 aaKnown RBP19.09■□□□□ 0.65
Ebf1-202ENSMUST00000101326 Rapgef2Q8CHG7 1496 aa19.09■□□□□ 0.65
Ebf1-202ENSMUST00000101326 Fam71e1A1L3C1 212 aa19.07■□□□□ 0.64
Ebf1-202ENSMUST00000101326 CftrP26361 1476 aa19.06■□□□□ 0.64
Ebf1-202ENSMUST00000101326 Npm2Q80W85 207 aa19.05■□□□□ 0.64
Ebf1-202ENSMUST00000101326 Ap3b1Q9Z1T1 1105 aa19.04■□□□□ 0.64
Ebf1-202ENSMUST00000101326 Top2bQ64511 1612 aa19.04■□□□□ 0.64
Ebf1-202ENSMUST00000101326 Eid3Q3V124 375 aa19.02■□□□□ 0.63
Ebf1-202ENSMUST00000101326 Cep162Q6ZQ06 1403 aa19.01■□□□□ 0.63
Ebf1-202ENSMUST00000101326 Cc2d2aQ8CFW7 1633 aa19■□□□□ 0.63
Ebf1-202ENSMUST00000101326 Clip1Q922J3 1391 aa18.97■□□□□ 0.63
Ebf1-202ENSMUST00000101326 DiexfQ8BTT6 772 aaKnown RBP18.94■□□□□ 0.62
Ebf1-202ENSMUST00000101326 Tnnt3Q9QZ47 272 aa18.9■□□□□ 0.62
Ebf1-202ENSMUST00000101326 Ncapd3Q6ZQK0 1506 aa18.87■□□□□ 0.61
Ebf1-202ENSMUST00000101326 Bcl11aQ9QYE3 773 aa18.84■□□□□ 0.61
Ebf1-202ENSMUST00000101326 Top2aQ01320 1528 aaKnown RBP18.81■□□□□ 0.6
Ebf1-202ENSMUST00000101326 Cttnbp2B9EJA2 1648 aa18.8■□□□□ 0.6
Ebf1-202ENSMUST00000101326 Fmn1Q05860 1466 aa18.8■□□□□ 0.6
Ebf1-202ENSMUST00000101326 BicraF8VPZ9 1578 aa18.74■□□□□ 0.59
Ebf1-202ENSMUST00000101326 Anp32aO35381 247 aa18.67■□□□□ 0.58
Ebf1-202ENSMUST00000101326 Znf710Q3U288 666 aa18.64■□□□□ 0.57
Ebf1-202ENSMUST00000101326 NclP09405 707 aaKnown RBP18.64■□□□□ 0.57
Ebf1-202ENSMUST00000101326 Rpap1Q80TE0 1409 aa18.6■□□□□ 0.57
Ebf1-202ENSMUST00000101326 Ifnlr1Q8CGK5 535 aa18.59■□□□□ 0.57
Ebf1-202ENSMUST00000101326 Stra8P70278 393 aa18.56■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Nolc1E9Q5C9 702 aaKnown RBP18.56■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Slc24a1Q91WD8 1130 aa18.55■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Arap1Q4LDD4 1452 aa18.55■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Kdm5bQ80Y84 1544 aa18.54■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Fam50aQ9WV03 339 aaKnown RBP18.54■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Calr4Q3TQS0 420 aa18.53■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Smarca4Q3TKT4 1613 aaKnown RBP18.53■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Eif4g1Q6NZJ6 1600 aaKnown RBP18.53■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Eea1Q8BL66 1411 aa18.53■□□□□ 0.56
Ebf1-202ENSMUST00000101326 Setd5Q5XJV7 1441 aa18.49■□□□□ 0.55
Ebf1-202ENSMUST00000101326 Arhgap35Q91YM2 1499 aa18.48■□□□□ 0.55
Ebf1-202ENSMUST00000101326 Baz1bQ9Z277 1479 aa18.47■□□□□ 0.55
Ebf1-202ENSMUST00000101326 Il27Q8K3I6 234 aa18.47■□□□□ 0.55
Ebf1-202ENSMUST00000101326 PtprkP35822 1457 aa18.42■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms