RNA–Protein interactions for RNA: ENSMUST00000101305.8

Atrx-201, Transcript of Transcriptional regulator ATRX, mousemouse

TSL 1 (best) BASIC

Gene Atrx, Length 2,903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atrx-201ENSMUST00000101305 Rpgrip1Q9EPQ2 1331 aa12.28□□□□□ -0.44
Atrx-201ENSMUST00000101305 NischQ80TM9 1593 aa12.19□□□□□ -0.46
Atrx-201ENSMUST00000101305 Rtl1Q7M732 1744 aa12.06□□□□□ -0.48
Atrx-201ENSMUST00000101305 Ccdc180J3QNE4 1664 aa11.96□□□□□ -0.49
Atrx-201ENSMUST00000101305 Acin1Q9JIX8 1338 aaKnown RBP11.92□□□□□ -0.5
Atrx-201ENSMUST00000101305 Rhox8Q6VSS7 320 aa11.91□□□□□ -0.5
Atrx-201ENSMUST00000101305 Abcc9P70170 1546 aa11.83□□□□□ -0.52
Atrx-201ENSMUST00000101305 Pcgf6Q99NA9 353 aa11.78□□□□□ -0.52
Atrx-201ENSMUST00000101305 Ehmt2Q9Z148 1263 aaKnown RBP11.7□□□□□ -0.54
Atrx-201ENSMUST00000101305 Gm35339A0A140LHH9 1649 aa11.68□□□□□ -0.54
Atrx-201ENSMUST00000101305 Zcchc6Q5BLK4 1491 aaKnown RBP11.5□□□□□ -0.57
Atrx-201ENSMUST00000101305 Dcaf1Q80TR8 1506 aa11.47□□□□□ -0.57
Atrx-201ENSMUST00000101305 Supt5hO55201 1082 aaKnown RBP11.44□□□□□ -0.58
Atrx-201ENSMUST00000101305 Abcc8B2RUS7 1588 aa11.42□□□□□ -0.58
Atrx-201ENSMUST00000101305 Neurod1Q60867 357 aa11.39□□□□□ -0.59
Atrx-201ENSMUST00000101305 Trim41Q5NCC3 630 aa11.39□□□□□ -0.59
Atrx-201ENSMUST00000101305 HrcG5E8J6 738 aa11.31□□□□□ -0.6
Atrx-201ENSMUST00000101305 Las1lA2BE28 776 aaKnown RBP11.23□□□□□ -0.61
Atrx-201ENSMUST00000101305 1700123L14RikQ3V2K7 440 aa11.13□□□□□ -0.63
Atrx-201ENSMUST00000101305 Zeb1Q64318 1117 aa11.07□□□□□ -0.64
Atrx-201ENSMUST00000101305 Csrnp3P59055 597 aa11.04□□□□□ -0.64
Atrx-201ENSMUST00000101305 Cngb1E1AZ71 1325 aa11.01□□□□□ -0.65
Atrx-201ENSMUST00000101305 Ccdc136Q3TVA9 1136 aa11.01□□□□□ -0.65
Atrx-201ENSMUST00000101305 Anks4bQ8K3X6 423 aa11□□□□□ -0.65
Atrx-201ENSMUST00000101305 CenpbP27790 599 aa10.99□□□□□ -0.65
Atrx-201ENSMUST00000101305 Sall2Q9QX96 1004 aa10.98□□□□□ -0.65
Atrx-201ENSMUST00000101305 Myt1Q8CFC2 1127 aa10.95□□□□□ -0.66
Atrx-201ENSMUST00000101305 NefmP08553 848 aa10.88□□□□□ -0.67
Atrx-201ENSMUST00000101305 Aplp2Q06335 707 aa10.85□□□□□ -0.67
Atrx-201ENSMUST00000101305 Cep164Q5DU05 1446 aa10.83□□□□□ -0.68
Atrx-201ENSMUST00000101305 Mier1Q5UAK0 511 aa10.82□□□□□ -0.68
Atrx-201ENSMUST00000101305 DiexfQ8BTT6 772 aaKnown RBP10.78□□□□□ -0.68
Atrx-201ENSMUST00000101305 Gm38655A0A286YDK6 273 aa10.75□□□□□ -0.69
Atrx-201ENSMUST00000101305 Cdk11bP24788 784 aaKnown RBP10.74□□□□□ -0.69
Atrx-201ENSMUST00000101305 Rb1cc1Q9ESK9 1588 aa10.74□□□□□ -0.69
Atrx-201ENSMUST00000101305 Wdr66E9Q743 1299 aa10.71□□□□□ -0.69
Atrx-201ENSMUST00000101305 Nop58Q6DFW4 536 aaKnown RBP10.7□□□□□ -0.7
Atrx-201ENSMUST00000101305 Aebp2Q9Z248 504 aaKnown RBP10.69□□□□□ -0.7
Atrx-201ENSMUST00000101305 Bcl11aQ9QYE3 773 aa10.68□□□□□ -0.7
Atrx-201ENSMUST00000101305 Gab3Q8BSM5 595 aa10.64□□□□□ -0.71
Atrx-201ENSMUST00000101305 Ppargc1bQ8VHJ7 1014 aa10.62□□□□□ -0.71
Atrx-201ENSMUST00000101305 ClspnQ80YR7 1315 aa10.6□□□□□ -0.71
Atrx-201ENSMUST00000101305 Baz1aO88379 1555 aa10.59□□□□□ -0.71
Atrx-201ENSMUST00000101305 Chic1Q8CBW7 227 aa10.57□□□□□ -0.72
Atrx-201ENSMUST00000101305 Rsf1E9PWW9 1441 aaKnown RBP10.55□□□□□ -0.72
Atrx-201ENSMUST00000101305 Fam71e1A1L3C1 212 aa10.54□□□□□ -0.72
Atrx-201ENSMUST00000101305 Mapk8ip2Q9ERE9 830 aa10.47□□□□□ -0.73
Atrx-201ENSMUST00000101305 SafbD3YXK2 937 aaKnown RBP10.46□□□□□ -0.74
Atrx-201ENSMUST00000101305 UbtfP25976 765 aaKnown RBP10.46□□□□□ -0.74
Atrx-201ENSMUST00000101305 ScribQ80U72 1612 aa10.44□□□□□ -0.74
Atrx-201ENSMUST00000101305 PrkcshO08795 521 aa10.43□□□□□ -0.74
Atrx-201ENSMUST00000101305 Hnrnpul2Q00PI9 745 aaKnown RBP10.43□□□□□ -0.74
Atrx-201ENSMUST00000101305 Ccdc88bQ4QRL3 1481 aa10.41□□□□□ -0.74
Atrx-201ENSMUST00000101305 Ifnlr1Q8CGK5 535 aa10.4□□□□□ -0.74
Atrx-201ENSMUST00000101305 Smarca2Q6DIC0 1577 aa10.4□□□□□ -0.75
Atrx-201ENSMUST00000101305 TonslQ6NZL6 1363 aa10.39□□□□□ -0.75
Atrx-201ENSMUST00000101305 Tnnt3Q9QZ47 272 aa10.34□□□□□ -0.75
Atrx-201ENSMUST00000101305 Kdm5dQ62240 1548 aa10.34□□□□□ -0.75
Atrx-201ENSMUST00000101305 Ap3b1Q9Z1T1 1105 aa10.3□□□□□ -0.76
Atrx-201ENSMUST00000101305 Anp32aO35381 247 aa10.26□□□□□ -0.77
Atrx-201ENSMUST00000101305 Golga3P55937 1487 aa10.25□□□□□ -0.77
Atrx-201ENSMUST00000101305 Crybg2B7ZCC2 1516 aa10.2□□□□□ -0.78
Atrx-201ENSMUST00000101305 Nolc1E9Q5C9 702 aaKnown RBP10.18□□□□□ -0.78
Atrx-201ENSMUST00000101305 Rtl5Q5DTT4 599 aa10.18□□□□□ -0.78
Atrx-201ENSMUST00000101305 Brd4Q9ESU6 1400 aaKnown RBP10.17□□□□□ -0.78
Atrx-201ENSMUST00000101305 Znf710Q3U288 666 aa10.16□□□□□ -0.78
Atrx-201ENSMUST00000101305 NacadQ5SWP3 1504 aa10.14□□□□□ -0.79
Atrx-201ENSMUST00000101305 Amer1Q7TS75 1132 aa10.12□□□□□ -0.79
Atrx-201ENSMUST00000101305 Rapgef2Q8CHG7 1496 aa10.12□□□□□ -0.79
Atrx-201ENSMUST00000101305 Ncapd3Q6ZQK0 1506 aa10.12□□□□□ -0.79
Atrx-201ENSMUST00000101305 Myt1lP97500 1187 aa10.11□□□□□ -0.79
Atrx-201ENSMUST00000101305 Calr4Q3TQS0 420 aa10.1□□□□□ -0.79
Atrx-201ENSMUST00000101305 Pelp1Q9DBD5 1123 aaKnown RBP10.1□□□□□ -0.79
Atrx-201ENSMUST00000101305 Synj1Q8CHC4 1574 aa10.09□□□□□ -0.79
Atrx-201ENSMUST00000101305 Plekhg3Q4VAC9 1341 aa10.09□□□□□ -0.79
Atrx-201ENSMUST00000101305 Eid3Q3V124 375 aa10.09□□□□□ -0.79
Atrx-201ENSMUST00000101305 Supt16hQ920B9 1047 aa10.09□□□□□ -0.79
Atrx-201ENSMUST00000101305 Hdac5Q9Z2V6 1113 aa10.07□□□□□ -0.8
Atrx-201ENSMUST00000101305 Cecr2E9Q2Z1 1453 aa10.07□□□□□ -0.8
Atrx-201ENSMUST00000101305 Rpap1Q80TE0 1409 aa10.07□□□□□ -0.8
Atrx-201ENSMUST00000101305 Top2bQ64511 1612 aa10.07□□□□□ -0.8
Atrx-201ENSMUST00000101305 Stra8P70278 393 aa10.05□□□□□ -0.8
Atrx-201ENSMUST00000101305 Esf1Q3V1V3 845 aaKnown RBP10.05□□□□□ -0.8
Atrx-201ENSMUST00000101305 Cep162Q6ZQ06 1403 aa10.04□□□□□ -0.8
Atrx-201ENSMUST00000101305 Cc2d2aQ8CFW7 1633 aa10.03□□□□□ -0.8
Atrx-201ENSMUST00000101305 Ttbk1Q6PCN3 1308 aa10.02□□□□□ -0.81
Atrx-201ENSMUST00000101305 Clip1Q922J3 1391 aa10.01□□□□□ -0.81
Atrx-201ENSMUST00000101305 Ppp4r2Q0VGB7 417 aa9.98□□□□□ -0.81
Atrx-201ENSMUST00000101305 Kdm5bQ80Y84 1544 aa9.98□□□□□ -0.81
Atrx-201ENSMUST00000101305 Wdr43Q6ZQL4 677 aaKnown RBP9.94□□□□□ -0.82
Atrx-201ENSMUST00000101305 Upf2A2AT37 1269 aaKnown RBP9.93□□□□□ -0.82
Atrx-201ENSMUST00000101305 Pak3Q61036 559 aa9.93□□□□□ -0.82
Atrx-201ENSMUST00000101305 CftrP26361 1476 aa9.93□□□□□ -0.82
Atrx-201ENSMUST00000101305 Il27Q8K3I6 234 aa9.93□□□□□ -0.82
Atrx-201ENSMUST00000101305 Top2aQ01320 1528 aaKnown RBP9.93□□□□□ -0.82
Atrx-201ENSMUST00000101305 NclP09405 707 aaKnown RBP9.93□□□□□ -0.82
Atrx-201ENSMUST00000101305 Npm2Q80W85 207 aa9.92□□□□□ -0.82
Atrx-201ENSMUST00000101305 Slc24a1Q91WD8 1130 aa9.92□□□□□ -0.82
Atrx-201ENSMUST00000101305 Sycp2Q9CUU3 1500 aa9.92□□□□□ -0.82
Atrx-201ENSMUST00000101305 Washc2Q6PGL7 1334 aa9.92□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 221.8 ms