RNA–Protein interactions for RNA: ENSMUST00000098948.9

Smarca4-202, Transcript of Transcription activator BRG1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca4, Length 6,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca4-202ENSMUST00000098948 Rhox8Q6VSS7 320 aa31,81■■■□□ 2,68
Smarca4-202ENSMUST00000098948 NischQ80TM9 1593 aa30,22■■■□□ 2,43
Smarca4-202ENSMUST00000098948 Rpgrip1Q9EPQ2 1331 aa28,88■■■□□ 2,21
Smarca4-202ENSMUST00000098948 Ccdc136Q3TVA9 1136 aa28,62■■■□□ 2,17
Smarca4-202ENSMUST00000098948 Ehmt2Q9Z148 1263 aaKnown RBP28,61■■■□□ 2,17
Smarca4-202ENSMUST00000098948 Esf1Q3V1V3 845 aaKnown RBP28,52■■■□□ 2,16
Smarca4-202ENSMUST00000098948 Abcc9P70170 1546 aa28,43■■■□□ 2,14
Smarca4-202ENSMUST00000098948 Cngb1E1AZ71 1325 aa28,23■■■□□ 2,11
Smarca4-202ENSMUST00000098948 Trim41Q5NCC3 630 aa28,17■■■□□ 2,1
Smarca4-202ENSMUST00000098948 Abcc8B2RUS7 1588 aa28,01■■■□□ 2,07
Smarca4-202ENSMUST00000098948 Gm35339A0A140LHH9 1649 aa27,85■■■□□ 2,05
Smarca4-202ENSMUST00000098948 Zeb1Q64318 1117 aa27,58■■■□□ 2,01
Smarca4-202ENSMUST00000098948 Wdr66E9Q743 1299 aa27,49■■□□□ 1,99
Smarca4-202ENSMUST00000098948 Npm2Q80W85 207 aa27,48■■□□□ 1,99
Smarca4-202ENSMUST00000098948 Zcchc6Q5BLK4 1491 aaKnown RBP27,48■■□□□ 1,99
Smarca4-202ENSMUST00000098948 Gab3Q8BSM5 595 aa27,46■■□□□ 1,99
Smarca4-202ENSMUST00000098948 Las1lA2BE28 776 aaKnown RBP27,42■■□□□ 1,98
Smarca4-202ENSMUST00000098948 Ccdc180J3QNE4 1664 aa27,11■■□□□ 1,93
Smarca4-202ENSMUST00000098948 Myt1lP97500 1187 aa27,1■■□□□ 1,93
Smarca4-202ENSMUST00000098948 Acin1Q9JIX8 1338 aaKnown RBP27,09■■□□□ 1,93
Smarca4-202ENSMUST00000098948 Rtl1Q7M732 1744 aa27,01■■□□□ 1,91
Smarca4-202ENSMUST00000098948 Il27Q8K3I6 234 aa26,98■■□□□ 1,91
Smarca4-202ENSMUST00000098948 Ube2uB1AUC4 352 aa26,87■■□□□ 1,89
Smarca4-202ENSMUST00000098948 NacadQ5SWP3 1504 aa26,61■■□□□ 1,85
Smarca4-202ENSMUST00000098948 Pelp1Q9DBD5 1123 aaKnown RBP26,56■■□□□ 1,84
Smarca4-202ENSMUST00000098948 Rb1cc1Q9ESK9 1588 aa26,55■■□□□ 1,84
Smarca4-202ENSMUST00000098948 HrcG5E8J6 738 aa26,54■■□□□ 1,84
Smarca4-202ENSMUST00000098948 NefmP08553 848 aa26,51■■□□□ 1,83
Smarca4-202ENSMUST00000098948 UbtfP25976 765 aaKnown RBP26,5■■□□□ 1,83
Smarca4-202ENSMUST00000098948 Npm1Q61937 292 aaKnown RBP26,34■■□□□ 1,81
Smarca4-202ENSMUST00000098948 Brd4Q9ESU6 1400 aaKnown RBP26,23■■□□□ 1,79
Smarca4-202ENSMUST00000098948 CenpbP27790 599 aa26,22■■□□□ 1,79
Smarca4-202ENSMUST00000098948 Pcgf6Q99NA9 353 aa26,16■■□□□ 1,78
Smarca4-202ENSMUST00000098948 Kdm5dQ62240 1548 aa26,06■■□□□ 1,76
Smarca4-202ENSMUST00000098948 Ubl4bQ9CQ84 188 aa25,99■■□□□ 1,75
Smarca4-202ENSMUST00000098948 Baz1aO88379 1555 aa25,97■■□□□ 1,75
Smarca4-202ENSMUST00000098948 Ap3b1Q9Z1T1 1105 aa25,96■■□□□ 1,75
Smarca4-202ENSMUST00000098948 Slc24a1Q91WD8 1130 aa25,92■■□□□ 1,74
Smarca4-202ENSMUST00000098948 Stra8P70278 393 aa25,91■■□□□ 1,74
Smarca4-202ENSMUST00000098948 Dcaf1Q80TR8 1506 aa25,86■■□□□ 1,73
Smarca4-202ENSMUST00000098948 Cdk11bP24788 784 aaKnown RBP25,85■■□□□ 1,73
Smarca4-202ENSMUST00000098948 Supt5hO55201 1082 aaKnown RBP25,75■■□□□ 1,71
Smarca4-202ENSMUST00000098948 Ercc6F8VPZ5 1481 aa25,67■■□□□ 1,7
Smarca4-202ENSMUST00000098948 Ppargc1bQ8VHJ7 1014 aa25,63■■□□□ 1,69
Smarca4-202ENSMUST00000098948 Nop58Q6DFW4 536 aaKnown RBP25,6■■□□□ 1,69
Smarca4-202ENSMUST00000098948 Fam50aQ9WV03 339 aaKnown RBP25,58■■□□□ 1,69
Smarca4-202ENSMUST00000098948 Amer1Q7TS75 1132 aa25,52■■□□□ 1,68
Smarca4-202ENSMUST00000098948 Mier1Q5UAK0 511 aa25,5■■□□□ 1,67
Smarca4-202ENSMUST00000098948 Sycp2Q9CUU3 1500 aa25,49■■□□□ 1,67
Smarca4-202ENSMUST00000098948 Pds5bQ4VA53 1446 aaKnown RBP25,44■■□□□ 1,66
Smarca4-202ENSMUST00000098948 TonslQ6NZL6 1363 aa25,44■■□□□ 1,66
Smarca4-202ENSMUST00000098948 NclP09405 707 aaKnown RBP25,44■■□□□ 1,66
Smarca4-202ENSMUST00000098948 Chic1Q8CBW7 227 aa25,39■■□□□ 1,66
Smarca4-202ENSMUST00000098948 Tnnt3Q9QZ47 272 aa25,38■■□□□ 1,65
Smarca4-202ENSMUST00000098948 ScribQ80U72 1612 aa25,37■■□□□ 1,65
Smarca4-202ENSMUST00000098948 Rsf1E9PWW9 1441 aaKnown RBP25,37■■□□□ 1,65
Smarca4-202ENSMUST00000098948 Ifnlr1Q8CGK5 535 aa25,36■■□□□ 1,65
Smarca4-202ENSMUST00000098948 Lmod2Q3UHZ5 550 aa25,35■■□□□ 1,65
Smarca4-202ENSMUST00000098948 Neurod1Q60867 357 aa25,35■■□□□ 1,65
Smarca4-202ENSMUST00000098948 Kif15Q6P9L6 1387 aa25,34■■□□□ 1,65
Smarca4-202ENSMUST00000098948 NrdcQ8BHG1 1161 aa25,26■■□□□ 1,63
Smarca4-202ENSMUST00000098948 Eif5bQ05D44 1216 aaKnown RBP25,24■■□□□ 1,63
Smarca4-202ENSMUST00000098948 Cep164Q5DU05 1446 aa25,24■■□□□ 1,63
Smarca4-202ENSMUST00000098948 Golga3P55937 1487 aa25,19■■□□□ 1,62
Smarca4-202ENSMUST00000098948 Plekhg3Q4VAC9 1341 aa25,18■■□□□ 1,62
Smarca4-202ENSMUST00000098948 Ttbk1Q6PCN3 1308 aa25,17■■□□□ 1,62
Smarca4-202ENSMUST00000098948 Fkbp15Q6P9Q6 1216 aaKnown RBP25,17■■□□□ 1,62
Smarca4-202ENSMUST00000098948 Myt1Q8CFC2 1127 aa25,14■■□□□ 1,61
Smarca4-202ENSMUST00000098948 Ccdc18Q640L5 1455 aa25,1■■□□□ 1,61
Smarca4-202ENSMUST00000098948 Crybg2B7ZCC2 1516 aa25,1■■□□□ 1,61
Smarca4-202ENSMUST00000098948 Os9Q8K2C7 672 aa25,06■■□□□ 1,6
Smarca4-202ENSMUST00000098948 Clip1Q922J3 1391 aa25,04■■□□□ 1,6
Smarca4-202ENSMUST00000098948 Anp32bQ9EST5 272 aaKnown RBP25,02■■□□□ 1,6
Smarca4-202ENSMUST00000098948 Zbtb7cQ8VCZ7 619 aa25,01■■□□□ 1,59
Smarca4-202ENSMUST00000098948 ClspnQ80YR7 1315 aa24,99■■□□□ 1,59
Smarca4-202ENSMUST00000098948 NeflP08551 543 aa24,97■■□□□ 1,59
Smarca4-202ENSMUST00000098948 Hnrnpul2Q00PI9 745 aaKnown RBP24,94■■□□□ 1,58
Smarca4-202ENSMUST00000098948 4933416C03RikQ3V063 378 aa24,9■■□□□ 1,58
Smarca4-202ENSMUST00000098948 Gm13697A2AK42 830 aa24,89■■□□□ 1,57
Smarca4-202ENSMUST00000098948 Atad2bE9Q166 1460 aaKnown RBP24,83■■□□□ 1,57
Smarca4-202ENSMUST00000098948 Sall2Q9QX96 1004 aa24,73■■□□□ 1,55
Smarca4-202ENSMUST00000098948 Cecr2E9Q2Z1 1453 aa24,71■■□□□ 1,55
Smarca4-202ENSMUST00000098948 Phldb1Q6PDH0 1371 aaKnown RBP24,7■■□□□ 1,55
Smarca4-202ENSMUST00000098948 Smarca2Q6DIC0 1577 aa24,67■■□□□ 1,54
Smarca4-202ENSMUST00000098948 Smarca4Q3TKT4 1613 aaKnown RBP24,67■■□□□ 1,54
Smarca4-202ENSMUST00000098948 Mapk8ip2Q9ERE9 830 aa24,67■■□□□ 1,54
Smarca4-202ENSMUST00000098948 Plppr3Q7TPB0 716 aa24,66■■□□□ 1,54
Smarca4-202ENSMUST00000098948 CftrP26361 1476 aa24,66■■□□□ 1,54
Smarca4-202ENSMUST00000098948 Setd5Q5XJV7 1441 aa24,65■■□□□ 1,54
Smarca4-202ENSMUST00000098948 Rtl5Q5DTT4 599 aa24,63■■□□□ 1,53
Smarca4-202ENSMUST00000098948 Arhgap27A2AB59 869 aa24,63■■□□□ 1,53
Smarca4-202ENSMUST00000098948 Erich6D3Z6S9 713 aa24,61■■□□□ 1,53
Smarca4-202ENSMUST00000098948 Eid3Q3V124 375 aa24,6■■□□□ 1,53
Smarca4-202ENSMUST00000098948 BlmO88700 1416 aa24,59■■□□□ 1,53
Smarca4-202ENSMUST00000098948 Gm38655A0A286YDK6 273 aa24,59■■□□□ 1,53
Smarca4-202ENSMUST00000098948 Fmn1Q05860 1466 aa24,56■■□□□ 1,52
Smarca4-202ENSMUST00000098948 Csrnp3P59055 597 aa24,56■■□□□ 1,52
Smarca4-202ENSMUST00000098948 Anp32aO35381 247 aa24,56■■□□□ 1,52
Smarca4-202ENSMUST00000098948 Hdac5Q9Z2V6 1113 aa24,55■■□□□ 1,52
Smarca4-202ENSMUST00000098948 Cux2P70298 1426 aa24,53■■□□□ 1,52
Retrieved 100 of 22,080 RNA–protein pairs in 70,8 ms