RNA–Protein interactions for RNA: ENSMUST00000098948.9

Smarca4-202, Transcript of Transcription activator BRG1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca4, Length 6,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca4-202ENSMUST00000098948 Rhox8Q6VSS7 320 aa31.81■■■□□ 2.68
Smarca4-202ENSMUST00000098948 NischQ80TM9 1593 aa30.22■■■□□ 2.43
Smarca4-202ENSMUST00000098948 Rpgrip1Q9EPQ2 1331 aa28.88■■■□□ 2.21
Smarca4-202ENSMUST00000098948 Ccdc136Q3TVA9 1136 aa28.62■■■□□ 2.17
Smarca4-202ENSMUST00000098948 Ehmt2Q9Z148 1263 aaKnown RBP28.61■■■□□ 2.17
Smarca4-202ENSMUST00000098948 Esf1Q3V1V3 845 aaKnown RBP28.52■■■□□ 2.16
Smarca4-202ENSMUST00000098948 Abcc9P70170 1546 aa28.43■■■□□ 2.14
Smarca4-202ENSMUST00000098948 Cngb1E1AZ71 1325 aa28.23■■■□□ 2.11
Smarca4-202ENSMUST00000098948 Trim41Q5NCC3 630 aa28.17■■■□□ 2.1
Smarca4-202ENSMUST00000098948 Abcc8B2RUS7 1588 aa28.01■■■□□ 2.07
Smarca4-202ENSMUST00000098948 Gm35339A0A140LHH9 1649 aa27.85■■■□□ 2.05
Smarca4-202ENSMUST00000098948 Zeb1Q64318 1117 aa27.58■■■□□ 2.01
Smarca4-202ENSMUST00000098948 Wdr66E9Q743 1299 aa27.49■■□□□ 1.99
Smarca4-202ENSMUST00000098948 Npm2Q80W85 207 aa27.48■■□□□ 1.99
Smarca4-202ENSMUST00000098948 Zcchc6Q5BLK4 1491 aaKnown RBP27.48■■□□□ 1.99
Smarca4-202ENSMUST00000098948 Gab3Q8BSM5 595 aa27.46■■□□□ 1.99
Smarca4-202ENSMUST00000098948 Las1lA2BE28 776 aaKnown RBP27.42■■□□□ 1.98
Smarca4-202ENSMUST00000098948 Ccdc180J3QNE4 1664 aa27.11■■□□□ 1.93
Smarca4-202ENSMUST00000098948 Myt1lP97500 1187 aa27.1■■□□□ 1.93
Smarca4-202ENSMUST00000098948 Acin1Q9JIX8 1338 aaKnown RBP27.09■■□□□ 1.93
Smarca4-202ENSMUST00000098948 Rtl1Q7M732 1744 aa27.01■■□□□ 1.91
Smarca4-202ENSMUST00000098948 Il27Q8K3I6 234 aa26.98■■□□□ 1.91
Smarca4-202ENSMUST00000098948 Ube2uB1AUC4 352 aa26.87■■□□□ 1.89
Smarca4-202ENSMUST00000098948 NacadQ5SWP3 1504 aa26.61■■□□□ 1.85
Smarca4-202ENSMUST00000098948 Pelp1Q9DBD5 1123 aaKnown RBP26.56■■□□□ 1.84
Smarca4-202ENSMUST00000098948 Rb1cc1Q9ESK9 1588 aa26.55■■□□□ 1.84
Smarca4-202ENSMUST00000098948 HrcG5E8J6 738 aa26.54■■□□□ 1.84
Smarca4-202ENSMUST00000098948 NefmP08553 848 aa26.51■■□□□ 1.83
Smarca4-202ENSMUST00000098948 UbtfP25976 765 aaKnown RBP26.5■■□□□ 1.83
Smarca4-202ENSMUST00000098948 Npm1Q61937 292 aaKnown RBP26.34■■□□□ 1.81
Smarca4-202ENSMUST00000098948 Brd4Q9ESU6 1400 aaKnown RBP26.23■■□□□ 1.79
Smarca4-202ENSMUST00000098948 CenpbP27790 599 aa26.22■■□□□ 1.79
Smarca4-202ENSMUST00000098948 Pcgf6Q99NA9 353 aa26.16■■□□□ 1.78
Smarca4-202ENSMUST00000098948 Kdm5dQ62240 1548 aa26.06■■□□□ 1.76
Smarca4-202ENSMUST00000098948 Ubl4bQ9CQ84 188 aa25.99■■□□□ 1.75
Smarca4-202ENSMUST00000098948 Baz1aO88379 1555 aa25.97■■□□□ 1.75
Smarca4-202ENSMUST00000098948 Ap3b1Q9Z1T1 1105 aa25.96■■□□□ 1.75
Smarca4-202ENSMUST00000098948 Slc24a1Q91WD8 1130 aa25.92■■□□□ 1.74
Smarca4-202ENSMUST00000098948 Stra8P70278 393 aa25.91■■□□□ 1.74
Smarca4-202ENSMUST00000098948 Dcaf1Q80TR8 1506 aa25.86■■□□□ 1.73
Smarca4-202ENSMUST00000098948 Cdk11bP24788 784 aaKnown RBP25.85■■□□□ 1.73
Smarca4-202ENSMUST00000098948 Supt5hO55201 1082 aaKnown RBP25.75■■□□□ 1.71
Smarca4-202ENSMUST00000098948 Ercc6F8VPZ5 1481 aa25.67■■□□□ 1.7
Smarca4-202ENSMUST00000098948 Ppargc1bQ8VHJ7 1014 aa25.63■■□□□ 1.69
Smarca4-202ENSMUST00000098948 Nop58Q6DFW4 536 aaKnown RBP25.6■■□□□ 1.69
Smarca4-202ENSMUST00000098948 Fam50aQ9WV03 339 aaKnown RBP25.58■■□□□ 1.69
Smarca4-202ENSMUST00000098948 Amer1Q7TS75 1132 aa25.52■■□□□ 1.68
Smarca4-202ENSMUST00000098948 Mier1Q5UAK0 511 aa25.5■■□□□ 1.67
Smarca4-202ENSMUST00000098948 Sycp2Q9CUU3 1500 aa25.49■■□□□ 1.67
Smarca4-202ENSMUST00000098948 Pds5bQ4VA53 1446 aaKnown RBP25.44■■□□□ 1.66
Smarca4-202ENSMUST00000098948 TonslQ6NZL6 1363 aa25.44■■□□□ 1.66
Smarca4-202ENSMUST00000098948 NclP09405 707 aaKnown RBP25.44■■□□□ 1.66
Smarca4-202ENSMUST00000098948 Chic1Q8CBW7 227 aa25.39■■□□□ 1.66
Smarca4-202ENSMUST00000098948 Tnnt3Q9QZ47 272 aa25.38■■□□□ 1.65
Smarca4-202ENSMUST00000098948 ScribQ80U72 1612 aa25.37■■□□□ 1.65
Smarca4-202ENSMUST00000098948 Rsf1E9PWW9 1441 aaKnown RBP25.37■■□□□ 1.65
Smarca4-202ENSMUST00000098948 Ifnlr1Q8CGK5 535 aa25.36■■□□□ 1.65
Smarca4-202ENSMUST00000098948 Lmod2Q3UHZ5 550 aa25.35■■□□□ 1.65
Smarca4-202ENSMUST00000098948 Neurod1Q60867 357 aa25.35■■□□□ 1.65
Smarca4-202ENSMUST00000098948 Kif15Q6P9L6 1387 aa25.34■■□□□ 1.65
Smarca4-202ENSMUST00000098948 NrdcQ8BHG1 1161 aa25.26■■□□□ 1.63
Smarca4-202ENSMUST00000098948 Eif5bQ05D44 1216 aaKnown RBP25.24■■□□□ 1.63
Smarca4-202ENSMUST00000098948 Cep164Q5DU05 1446 aa25.24■■□□□ 1.63
Smarca4-202ENSMUST00000098948 Golga3P55937 1487 aa25.19■■□□□ 1.62
Smarca4-202ENSMUST00000098948 Plekhg3Q4VAC9 1341 aa25.18■■□□□ 1.62
Smarca4-202ENSMUST00000098948 Ttbk1Q6PCN3 1308 aa25.17■■□□□ 1.62
Smarca4-202ENSMUST00000098948 Fkbp15Q6P9Q6 1216 aaKnown RBP25.17■■□□□ 1.62
Smarca4-202ENSMUST00000098948 Myt1Q8CFC2 1127 aa25.14■■□□□ 1.61
Smarca4-202ENSMUST00000098948 Ccdc18Q640L5 1455 aa25.1■■□□□ 1.61
Smarca4-202ENSMUST00000098948 Crybg2B7ZCC2 1516 aa25.1■■□□□ 1.61
Smarca4-202ENSMUST00000098948 Os9Q8K2C7 672 aa25.06■■□□□ 1.6
Smarca4-202ENSMUST00000098948 Clip1Q922J3 1391 aa25.04■■□□□ 1.6
Smarca4-202ENSMUST00000098948 Anp32bQ9EST5 272 aaKnown RBP25.02■■□□□ 1.6
Smarca4-202ENSMUST00000098948 Zbtb7cQ8VCZ7 619 aa25.01■■□□□ 1.59
Smarca4-202ENSMUST00000098948 ClspnQ80YR7 1315 aa24.99■■□□□ 1.59
Smarca4-202ENSMUST00000098948 NeflP08551 543 aa24.97■■□□□ 1.59
Smarca4-202ENSMUST00000098948 Hnrnpul2Q00PI9 745 aaKnown RBP24.94■■□□□ 1.58
Smarca4-202ENSMUST00000098948 4933416C03RikQ3V063 378 aa24.9■■□□□ 1.58
Smarca4-202ENSMUST00000098948 Gm13697A2AK42 830 aa24.89■■□□□ 1.57
Smarca4-202ENSMUST00000098948 Atad2bE9Q166 1460 aaKnown RBP24.83■■□□□ 1.57
Smarca4-202ENSMUST00000098948 Sall2Q9QX96 1004 aa24.73■■□□□ 1.55
Smarca4-202ENSMUST00000098948 Cecr2E9Q2Z1 1453 aa24.71■■□□□ 1.55
Smarca4-202ENSMUST00000098948 Phldb1Q6PDH0 1371 aaKnown RBP24.7■■□□□ 1.55
Smarca4-202ENSMUST00000098948 Smarca2Q6DIC0 1577 aa24.67■■□□□ 1.54
Smarca4-202ENSMUST00000098948 Smarca4Q3TKT4 1613 aaKnown RBP24.67■■□□□ 1.54
Smarca4-202ENSMUST00000098948 Mapk8ip2Q9ERE9 830 aa24.67■■□□□ 1.54
Smarca4-202ENSMUST00000098948 Plppr3Q7TPB0 716 aa24.66■■□□□ 1.54
Smarca4-202ENSMUST00000098948 CftrP26361 1476 aa24.66■■□□□ 1.54
Smarca4-202ENSMUST00000098948 Setd5Q5XJV7 1441 aa24.65■■□□□ 1.54
Smarca4-202ENSMUST00000098948 Rtl5Q5DTT4 599 aa24.63■■□□□ 1.53
Smarca4-202ENSMUST00000098948 Arhgap27A2AB59 869 aa24.63■■□□□ 1.53
Smarca4-202ENSMUST00000098948 Erich6D3Z6S9 713 aa24.61■■□□□ 1.53
Smarca4-202ENSMUST00000098948 Eid3Q3V124 375 aa24.6■■□□□ 1.53
Smarca4-202ENSMUST00000098948 BlmO88700 1416 aa24.59■■□□□ 1.53
Smarca4-202ENSMUST00000098948 Gm38655A0A286YDK6 273 aa24.59■■□□□ 1.53
Smarca4-202ENSMUST00000098948 Fmn1Q05860 1466 aa24.56■■□□□ 1.52
Smarca4-202ENSMUST00000098948 Csrnp3P59055 597 aa24.56■■□□□ 1.52
Smarca4-202ENSMUST00000098948 Anp32aO35381 247 aa24.56■■□□□ 1.52
Smarca4-202ENSMUST00000098948 Hdac5Q9Z2V6 1113 aa24.55■■□□□ 1.52
Smarca4-202ENSMUST00000098948 Cux2P70298 1426 aa24.53■■□□□ 1.52
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms