RNA–Protein interactions for RNA: ENSMUST00000078494.5

Rag1-201, Transcript of V(D)J recombination-activating protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rag1, Length 6,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rag1-201ENSMUST00000078494 Rhox8Q6VSS7 320 aa14.51□□□□□ -0.09
Rag1-201ENSMUST00000078494 Ehmt2Q9Z148 1263 aaKnown RBP13.28□□□□□ -0.28
Rag1-201ENSMUST00000078494 Rpgrip1Q9EPQ2 1331 aa13.09□□□□□ -0.31
Rag1-201ENSMUST00000078494 Ccdc136Q3TVA9 1136 aa12.91□□□□□ -0.34
Rag1-201ENSMUST00000078494 Cngb1E1AZ71 1325 aa12.87□□□□□ -0.35
Rag1-201ENSMUST00000078494 Wdr66E9Q743 1299 aa12.82□□□□□ -0.36
Rag1-201ENSMUST00000078494 Esf1Q3V1V3 845 aaKnown RBP12.8□□□□□ -0.36
Rag1-201ENSMUST00000078494 Las1lA2BE28 776 aaKnown RBP12.72□□□□□ -0.37
Rag1-201ENSMUST00000078494 Gab3Q8BSM5 595 aa12.71□□□□□ -0.38
Rag1-201ENSMUST00000078494 Zeb1Q64318 1117 aa12.7□□□□□ -0.38
Rag1-201ENSMUST00000078494 Ube2uB1AUC4 352 aa12.68□□□□□ -0.38
Rag1-201ENSMUST00000078494 Npm2Q80W85 207 aa12.55□□□□□ -0.4
Rag1-201ENSMUST00000078494 NischQ80TM9 1593 aa12.52□□□□□ -0.4
Rag1-201ENSMUST00000078494 Myt1lP97500 1187 aa12.5□□□□□ -0.41
Rag1-201ENSMUST00000078494 Trim41Q5NCC3 630 aa12.46□□□□□ -0.41
Rag1-201ENSMUST00000078494 Pelp1Q9DBD5 1123 aaKnown RBP12.41□□□□□ -0.42
Rag1-201ENSMUST00000078494 UbtfP25976 765 aaKnown RBP12.26□□□□□ -0.45
Rag1-201ENSMUST00000078494 Acin1Q9JIX8 1338 aaKnown RBP12.21□□□□□ -0.45
Rag1-201ENSMUST00000078494 Slc24a1Q91WD8 1130 aa12.16□□□□□ -0.46
Rag1-201ENSMUST00000078494 Ccdc180J3QNE4 1664 aa12.11□□□□□ -0.47
Rag1-201ENSMUST00000078494 CenpbP27790 599 aa12.09□□□□□ -0.47
Rag1-201ENSMUST00000078494 Amer1Q7TS75 1132 aa12.08□□□□□ -0.47
Rag1-201ENSMUST00000078494 NefmP08553 848 aa12.07□□□□□ -0.48
Rag1-201ENSMUST00000078494 Il27Q8K3I6 234 aa12.02□□□□□ -0.49
Rag1-201ENSMUST00000078494 Rtl1Q7M732 1744 aa12.01□□□□□ -0.49
Rag1-201ENSMUST00000078494 Stra8P70278 393 aa11.96□□□□□ -0.49
Rag1-201ENSMUST00000078494 Ap3b1Q9Z1T1 1105 aa11.96□□□□□ -0.5
Rag1-201ENSMUST00000078494 Ppargc1bQ8VHJ7 1014 aa11.87□□□□□ -0.51
Rag1-201ENSMUST00000078494 Neurod1Q60867 357 aa11.86□□□□□ -0.51
Rag1-201ENSMUST00000078494 Cdk11bP24788 784 aaKnown RBP11.85□□□□□ -0.51
Rag1-201ENSMUST00000078494 Fam50aQ9WV03 339 aaKnown RBP11.85□□□□□ -0.51
Rag1-201ENSMUST00000078494 Ttbk1Q6PCN3 1308 aa11.84□□□□□ -0.51
Rag1-201ENSMUST00000078494 Zcchc6Q5BLK4 1491 aaKnown RBP11.83□□□□□ -0.52
Rag1-201ENSMUST00000078494 HrcG5E8J6 738 aa11.82□□□□□ -0.52
Rag1-201ENSMUST00000078494 Pcgf6Q99NA9 353 aa11.82□□□□□ -0.52
Rag1-201ENSMUST00000078494 Gm35339A0A140LHH9 1649 aa11.8□□□□□ -0.52
Rag1-201ENSMUST00000078494 Eif5bQ05D44 1216 aaKnown RBP11.79□□□□□ -0.52
Rag1-201ENSMUST00000078494 Abcc9P70170 1546 aa11.78□□□□□ -0.52
Rag1-201ENSMUST00000078494 NclP09405 707 aaKnown RBP11.77□□□□□ -0.52
Rag1-201ENSMUST00000078494 NrdcQ8BHG1 1161 aa11.74□□□□□ -0.53
Rag1-201ENSMUST00000078494 Nop58Q6DFW4 536 aaKnown RBP11.72□□□□□ -0.53
Rag1-201ENSMUST00000078494 Os9Q8K2C7 672 aa11.71□□□□□ -0.53
Rag1-201ENSMUST00000078494 Supt5hO55201 1082 aaKnown RBP11.68□□□□□ -0.54
Rag1-201ENSMUST00000078494 4933416C03RikQ3V063 378 aa11.67□□□□□ -0.54
Rag1-201ENSMUST00000078494 Anp32bQ9EST5 272 aaKnown RBP11.65□□□□□ -0.54
Rag1-201ENSMUST00000078494 TonslQ6NZL6 1363 aa11.64□□□□□ -0.55
Rag1-201ENSMUST00000078494 NeflP08551 543 aa11.64□□□□□ -0.55
Rag1-201ENSMUST00000078494 Tnnt3Q9QZ47 272 aa11.62□□□□□ -0.55
Rag1-201ENSMUST00000078494 Mier1Q5UAK0 511 aa11.59□□□□□ -0.55
Rag1-201ENSMUST00000078494 Zbtb7cQ8VCZ7 619 aa11.57□□□□□ -0.56
Rag1-201ENSMUST00000078494 Lmod2Q3UHZ5 550 aa11.52□□□□□ -0.57
Rag1-201ENSMUST00000078494 Plekhg3Q4VAC9 1341 aa11.5□□□□□ -0.57
Rag1-201ENSMUST00000078494 4930567H17RikQ3V0K5 233 aa11.48□□□□□ -0.57
Rag1-201ENSMUST00000078494 Zbtb4Q5F293 982 aa11.44□□□□□ -0.58
Rag1-201ENSMUST00000078494 Chic1Q8CBW7 227 aa11.43□□□□□ -0.58
Rag1-201ENSMUST00000078494 Hnrnpul2Q00PI9 745 aaKnown RBP11.42□□□□□ -0.58
Rag1-201ENSMUST00000078494 Ifnlr1Q8CGK5 535 aa11.41□□□□□ -0.58
Rag1-201ENSMUST00000078494 Mapk8ip2Q9ERE9 830 aa11.4□□□□□ -0.58
Rag1-201ENSMUST00000078494 Myt1Q8CFC2 1127 aa11.4□□□□□ -0.59
Rag1-201ENSMUST00000078494 Npm1Q61937 292 aaKnown RBP11.39□□□□□ -0.59
Rag1-201ENSMUST00000078494 Erich6D3Z6S9 713 aa11.34□□□□□ -0.59
Rag1-201ENSMUST00000078494 ClspnQ80YR7 1315 aa11.34□□□□□ -0.59
Rag1-201ENSMUST00000078494 Prdm10Q3UTQ7 1184 aa11.34□□□□□ -0.59
Rag1-201ENSMUST00000078494 Gm13697A2AK42 830 aa11.33□□□□□ -0.6
Rag1-201ENSMUST00000078494 Gm38655A0A286YDK6 273 aa11.31□□□□□ -0.6
Rag1-201ENSMUST00000078494 Atp1b4Q99ME6 356 aa11.29□□□□□ -0.6
Rag1-201ENSMUST00000078494 Eid3Q3V124 375 aa11.29□□□□□ -0.6
Rag1-201ENSMUST00000078494 Nlrp6Q91WS2 869 aa11.28□□□□□ -0.6
Rag1-201ENSMUST00000078494 Abcc8B2RUS7 1588 aa11.27□□□□□ -0.61
Rag1-201ENSMUST00000078494 Rtl5Q5DTT4 599 aa11.27□□□□□ -0.61
Rag1-201ENSMUST00000078494 Polr3glQ8R0C0 218 aa11.27□□□□□ -0.61
Rag1-201ENSMUST00000078494 Anp32aO35381 247 aa11.24□□□□□ -0.61
Rag1-201ENSMUST00000078494 Fkbp15Q6P9Q6 1216 aaKnown RBP11.24□□□□□ -0.61
Rag1-201ENSMUST00000078494 ArxO35085 564 aa11.23□□□□□ -0.61
Rag1-201ENSMUST00000078494 DaxxO35613 739 aa11.22□□□□□ -0.61
Rag1-201ENSMUST00000078494 Csrnp3P59055 597 aa11.2□□□□□ -0.62
Rag1-201ENSMUST00000078494 Clip1Q922J3 1391 aa11.19□□□□□ -0.62
Rag1-201ENSMUST00000078494 Sall2Q9QX96 1004 aa11.17□□□□□ -0.62
Rag1-201ENSMUST00000078494 Plppr3Q7TPB0 716 aa11.14□□□□□ -0.63
Rag1-201ENSMUST00000078494 Rangap1P46061 589 aaKnown RBP11.14□□□□□ -0.63
Rag1-201ENSMUST00000078494 Brd4Q9ESU6 1400 aaKnown RBP11.13□□□□□ -0.63
Rag1-201ENSMUST00000078494 Gm13695A2AK44 830 aa11.13□□□□□ -0.63
Rag1-201ENSMUST00000078494 Rb1cc1Q9ESK9 1588 aa11.12□□□□□ -0.63
Rag1-201ENSMUST00000078494 Cep164Q5DU05 1446 aa11.09□□□□□ -0.63
Rag1-201ENSMUST00000078494 Dcaf1Q80TR8 1506 aa11.08□□□□□ -0.63
Rag1-201ENSMUST00000078494 Chic2Q9D9G3 165 aa11.08□□□□□ -0.64
Rag1-201ENSMUST00000078494 Rad21Q61550 635 aaKnown RBP11.05□□□□□ -0.64
Rag1-201ENSMUST00000078494 Ppp4r2Q0VGB7 417 aa11.04□□□□□ -0.64
Rag1-201ENSMUST00000078494 Anks4bQ8K3X6 423 aa11.03□□□□□ -0.64
Rag1-201ENSMUST00000078494 DiexfQ8BTT6 772 aaKnown RBP11.02□□□□□ -0.65
Rag1-201ENSMUST00000078494 Calr4Q3TQS0 420 aa11.01□□□□□ -0.65
Rag1-201ENSMUST00000078494 Ubl4bQ9CQ84 188 aa11.01□□□□□ -0.65
Rag1-201ENSMUST00000078494 Hdac5Q9Z2V6 1113 aa10.99□□□□□ -0.65
Rag1-201ENSMUST00000078494 BlmO88700 1416 aa10.97□□□□□ -0.65
Rag1-201ENSMUST00000078494 Ccer2J3QPU5 274 aa10.95□□□□□ -0.66
Rag1-201ENSMUST00000078494 Mrs2Q5NCE8 434 aa10.92□□□□□ -0.66
Rag1-201ENSMUST00000078494 Trim26Q99PN3 545 aa10.91□□□□□ -0.66
Rag1-201ENSMUST00000078494 Aplp2Q06335 707 aa10.91□□□□□ -0.66
Rag1-201ENSMUST00000078494 Vsig10D3YX43 558 aa10.88□□□□□ -0.67
Rag1-201ENSMUST00000078494 Wdr43Q6ZQL4 677 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 126.1 ms