RNA–Protein interactions for RNA: ENSMUST00000077303.3

Ptpra-202, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

TSL 1 (best) BASIC

Gene Ptpra, Length 3,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-202ENSMUST00000077303 NischQ80TM9 1593 aa13.29□□□□□ -0.28
Ptpra-202ENSMUST00000077303 Gm35339A0A140LHH9 1649 aa13.25□□□□□ -0.29
Ptpra-202ENSMUST00000077303 Abcc9P70170 1546 aa12.95□□□□□ -0.34
Ptpra-202ENSMUST00000077303 Abcc8B2RUS7 1588 aa12.66□□□□□ -0.38
Ptpra-202ENSMUST00000077303 Rtl1Q7M732 1744 aa12.12□□□□□ -0.47
Ptpra-202ENSMUST00000077303 Rhox8Q6VSS7 320 aa12.02□□□□□ -0.49
Ptpra-202ENSMUST00000077303 ScribQ80U72 1612 aa11.98□□□□□ -0.49
Ptpra-202ENSMUST00000077303 Dcaf1Q80TR8 1506 aa11.87□□□□□ -0.51
Ptpra-202ENSMUST00000077303 Ccdc180J3QNE4 1664 aa11.81□□□□□ -0.52
Ptpra-202ENSMUST00000077303 Rb1cc1Q9ESK9 1588 aa11.65□□□□□ -0.54
Ptpra-202ENSMUST00000077303 Kdm5dQ62240 1548 aa11.64□□□□□ -0.55
Ptpra-202ENSMUST00000077303 Zcchc6Q5BLK4 1491 aaKnown RBP11.61□□□□□ -0.55
Ptpra-202ENSMUST00000077303 NacadQ5SWP3 1504 aa11.55□□□□□ -0.56
Ptpra-202ENSMUST00000077303 Baz1aO88379 1555 aa11.53□□□□□ -0.56
Ptpra-202ENSMUST00000077303 Crybg2B7ZCC2 1516 aa11.38□□□□□ -0.59
Ptpra-202ENSMUST00000077303 Dnajc5bQ9CQ94 199 aa11.34□□□□□ -0.59
Ptpra-202ENSMUST00000077303 Sycp2Q9CUU3 1500 aa11.34□□□□□ -0.59
Ptpra-202ENSMUST00000077303 Rpgrip1Q9EPQ2 1331 aa11.33□□□□□ -0.6
Ptpra-202ENSMUST00000077303 Smarca2Q6DIC0 1577 aa11.28□□□□□ -0.6
Ptpra-202ENSMUST00000077303 BicraF8VPZ9 1578 aa11.22□□□□□ -0.61
Ptpra-202ENSMUST00000077303 DiexfQ8BTT6 772 aaKnown RBP11.22□□□□□ -0.61
Ptpra-202ENSMUST00000077303 Pcgf6Q99NA9 353 aa11.18□□□□□ -0.62
Ptpra-202ENSMUST00000077303 HrcG5E8J6 738 aa11.16□□□□□ -0.62
Ptpra-202ENSMUST00000077303 Ccdc136Q3TVA9 1136 aa11.15□□□□□ -0.62
Ptpra-202ENSMUST00000077303 Myt1Q8CFC2 1127 aa11.09□□□□□ -0.63
Ptpra-202ENSMUST00000077303 Trim41Q5NCC3 630 aa11.01□□□□□ -0.65
Ptpra-202ENSMUST00000077303 Ube2uB1AUC4 352 aa10.95□□□□□ -0.66
Ptpra-202ENSMUST00000077303 Brd4Q9ESU6 1400 aaKnown RBP10.94□□□□□ -0.66
Ptpra-202ENSMUST00000077303 CenpbP27790 599 aa10.94□□□□□ -0.66
Ptpra-202ENSMUST00000077303 Cecr2E9Q2Z1 1453 aa10.93□□□□□ -0.66
Ptpra-202ENSMUST00000077303 Cep164Q5DU05 1446 aa10.89□□□□□ -0.67
Ptpra-202ENSMUST00000077303 Synj1Q8CHC4 1574 aa10.88□□□□□ -0.67
Ptpra-202ENSMUST00000077303 Pds5bQ4VA53 1446 aaKnown RBP10.87□□□□□ -0.67
Ptpra-202ENSMUST00000077303 Bcl11aQ9QYE3 773 aa10.85□□□□□ -0.67
Ptpra-202ENSMUST00000077303 Acin1Q9JIX8 1338 aaKnown RBP10.84□□□□□ -0.67
Ptpra-202ENSMUST00000077303 Amer1Q7TS75 1132 aa10.82□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Cttnbp2B9EJA2 1648 aa10.82□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Las1lA2BE28 776 aaKnown RBP10.81□□□□□ -0.68
Ptpra-202ENSMUST00000077303 CftrP26361 1476 aa10.8□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Golga3P55937 1487 aa10.8□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Esf1Q3V1V3 845 aaKnown RBP10.78□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Smarca4Q3TKT4 1613 aaKnown RBP10.78□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Atad2bE9Q166 1460 aaKnown RBP10.78□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Top2bQ64511 1612 aa10.77□□□□□ -0.68
Ptpra-202ENSMUST00000077303 Ehmt2Q9Z148 1263 aaKnown RBP10.77□□□□□ -0.69
Ptpra-202ENSMUST00000077303 Rsf1E9PWW9 1441 aaKnown RBP10.75□□□□□ -0.69
Ptpra-202ENSMUST00000077303 Ubl4bQ9CQ84 188 aa10.72□□□□□ -0.69
Ptpra-202ENSMUST00000077303 Ercc6F8VPZ5 1481 aa10.72□□□□□ -0.69
Ptpra-202ENSMUST00000077303 Cc2d2aQ8CFW7 1633 aa10.7□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Ttbk1Q6PCN3 1308 aa10.69□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Iqgap2Q3UQ44 1575 aa10.69□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Cngb1E1AZ71 1325 aa10.68□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Ccdc88bQ4QRL3 1481 aa10.68□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Thoc2B1AZI6 1594 aaKnown RBP10.68□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Plppr3Q7TPB0 716 aa10.68□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Chic1Q8CBW7 227 aa10.65□□□□□ -0.7
Ptpra-202ENSMUST00000077303 Frmpd1A2AKB4 1549 aa10.62□□□□□ -0.71
Ptpra-202ENSMUST00000077303 PrkcshO08795 521 aa10.6□□□□□ -0.71
Ptpra-202ENSMUST00000077303 Il27Q8K3I6 234 aa10.59□□□□□ -0.71
Ptpra-202ENSMUST00000077303 1700123L14RikQ3V2K7 440 aa10.56□□□□□ -0.72
Ptpra-202ENSMUST00000077303 Neurod1Q60867 357 aa10.55□□□□□ -0.72
Ptpra-202ENSMUST00000077303 Fmn1Q05860 1466 aa10.55□□□□□ -0.72
Ptpra-202ENSMUST00000077303 Phldb1Q6PDH0 1371 aaKnown RBP10.54□□□□□ -0.72
Ptpra-202ENSMUST00000077303 Wdr62Q3U3T8 1523 aa10.54□□□□□ -0.72
Ptpra-202ENSMUST00000077303 Top2aQ01320 1528 aaKnown RBP10.52□□□□□ -0.73
Ptpra-202ENSMUST00000077303 Gab3Q8BSM5 595 aa10.48□□□□□ -0.73
Ptpra-202ENSMUST00000077303 TnnQ80Z71 1560 aa10.47□□□□□ -0.73
Ptpra-202ENSMUST00000077303 Rapgef2Q8CHG7 1496 aa10.46□□□□□ -0.74
Ptpra-202ENSMUST00000077303 CatipB9EKE5 520 aa10.45□□□□□ -0.74
Ptpra-202ENSMUST00000077303 Kif15Q6P9L6 1387 aa10.44□□□□□ -0.74
Ptpra-202ENSMUST00000077303 Fam135aQ6NS59 1506 aa10.43□□□□□ -0.74
Ptpra-202ENSMUST00000077303 Supt5hO55201 1082 aaKnown RBP10.42□□□□□ -0.74
Ptpra-202ENSMUST00000077303 Unc13aQ4KUS2 1712 aa10.39□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Npm1Q61937 292 aaKnown RBP10.39□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Eif4g1Q6NZJ6 1600 aaKnown RBP10.37□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Cux2P70298 1426 aa10.37□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Lamc3Q9R0B6 1581 aa10.36□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Mrc2Q64449 1479 aa10.36□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Cep162Q6ZQ06 1403 aa10.34□□□□□ -0.75
Ptpra-202ENSMUST00000077303 Camsap1A2AHC3 1581 aa10.25□□□□□ -0.77
Ptpra-202ENSMUST00000077303 Zeb1Q64318 1117 aa10.25□□□□□ -0.77
Ptpra-202ENSMUST00000077303 NrkQ9R0G8 1455 aa10.24□□□□□ -0.77
Ptpra-202ENSMUST00000077303 ArxO35085 564 aa10.23□□□□□ -0.77
Ptpra-202ENSMUST00000077303 Csrnp3P59055 597 aa10.23□□□□□ -0.77
Ptpra-202ENSMUST00000077303 Aplp2Q06335 707 aa10.22□□□□□ -0.77
Ptpra-202ENSMUST00000077303 Arhgap35Q91YM2 1499 aa10.2□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Shroom4Q1W617 1475 aa10.19□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Mier1Q5UAK0 511 aa10.19□□□□□ -0.78
Ptpra-202ENSMUST00000077303 PtprkP35822 1457 aa10.19□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Pelp1Q9DBD5 1123 aaKnown RBP10.18□□□□□ -0.78
Ptpra-202ENSMUST00000077303 NefmP08553 848 aa10.18□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Map3k1P53349 1493 aa10.17□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Npm2Q80W85 207 aa10.16□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Ccdc18Q640L5 1455 aa10.16□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Grin2bQ01097 1482 aa10.15□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Dhx29Q6PGC1 1365 aaKnown RBP10.15□□□□□ -0.78
Ptpra-202ENSMUST00000077303 Kif21aQ9QXL2 1672 aa10.15□□□□□ -0.79
Ptpra-202ENSMUST00000077303 Pknox2Q8BG99 474 aa10.15□□□□□ -0.79
Ptpra-202ENSMUST00000077303 Anks4bQ8K3X6 423 aa10.14□□□□□ -0.79
Ptpra-202ENSMUST00000077303 Ifnlr1Q8CGK5 535 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 188.3 ms