RNA–Protein interactions for RNA: ENSMUST00000073691.3

Lima1-201, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lima1, Length 4,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-201ENSMUST00000073691 Rhox8Q6VSS7 320 aa19.78■□□□□ 0.76
Lima1-201ENSMUST00000073691 NischQ80TM9 1593 aa18.46■□□□□ 0.55
Lima1-201ENSMUST00000073691 Ehmt2Q9Z148 1263 aaKnown RBP18.2■□□□□ 0.5
Lima1-201ENSMUST00000073691 Ccdc136Q3TVA9 1136 aa17.96■□□□□ 0.47
Lima1-201ENSMUST00000073691 Rpgrip1Q9EPQ2 1331 aa17.85■□□□□ 0.45
Lima1-201ENSMUST00000073691 Abcc9P70170 1546 aa17.43■□□□□ 0.38
Lima1-201ENSMUST00000073691 Trim41Q5NCC3 630 aa17.41■□□□□ 0.38
Lima1-201ENSMUST00000073691 Cngb1E1AZ71 1325 aa17.39■□□□□ 0.38
Lima1-201ENSMUST00000073691 Gab3Q8BSM5 595 aa17.39■□□□□ 0.37
Lima1-201ENSMUST00000073691 Gm35339A0A140LHH9 1649 aa17.32■□□□□ 0.36
Lima1-201ENSMUST00000073691 Esf1Q3V1V3 845 aaKnown RBP17.22■□□□□ 0.35
Lima1-201ENSMUST00000073691 Acin1Q9JIX8 1338 aaKnown RBP17.21■□□□□ 0.35
Lima1-201ENSMUST00000073691 Zeb1Q64318 1117 aa17.17■□□□□ 0.34
Lima1-201ENSMUST00000073691 Ccdc180J3QNE4 1664 aa17.14■□□□□ 0.33
Lima1-201ENSMUST00000073691 Abcc8B2RUS7 1588 aa17.06■□□□□ 0.32
Lima1-201ENSMUST00000073691 Wdr66E9Q743 1299 aa16.98■□□□□ 0.31
Lima1-201ENSMUST00000073691 HrcG5E8J6 738 aa16.97■□□□□ 0.31
Lima1-201ENSMUST00000073691 Rtl1Q7M732 1744 aa16.95■□□□□ 0.3
Lima1-201ENSMUST00000073691 Myt1lP97500 1187 aa16.88■□□□□ 0.29
Lima1-201ENSMUST00000073691 Las1lA2BE28 776 aaKnown RBP16.81■□□□□ 0.28
Lima1-201ENSMUST00000073691 Npm2Q80W85 207 aa16.78■□□□□ 0.28
Lima1-201ENSMUST00000073691 Pcgf6Q99NA9 353 aa16.77■□□□□ 0.28
Lima1-201ENSMUST00000073691 Zcchc6Q5BLK4 1491 aaKnown RBP16.73■□□□□ 0.27
Lima1-201ENSMUST00000073691 UbtfP25976 765 aaKnown RBP16.73■□□□□ 0.27
Lima1-201ENSMUST00000073691 NefmP08553 848 aa16.57■□□□□ 0.24
Lima1-201ENSMUST00000073691 Supt5hO55201 1082 aaKnown RBP16.54■□□□□ 0.24
Lima1-201ENSMUST00000073691 Ube2uB1AUC4 352 aa16.48■□□□□ 0.23
Lima1-201ENSMUST00000073691 Ppargc1bQ8VHJ7 1014 aa16.44■□□□□ 0.22
Lima1-201ENSMUST00000073691 Il27Q8K3I6 234 aa16.36■□□□□ 0.21
Lima1-201ENSMUST00000073691 Mier1Q5UAK0 511 aa16.32■□□□□ 0.2
Lima1-201ENSMUST00000073691 Chic1Q8CBW7 227 aa16.27■□□□□ 0.19
Lima1-201ENSMUST00000073691 Dcaf1Q80TR8 1506 aa16.25■□□□□ 0.19
Lima1-201ENSMUST00000073691 Ap3b1Q9Z1T1 1105 aa16.22■□□□□ 0.19
Lima1-201ENSMUST00000073691 Rb1cc1Q9ESK9 1588 aa16.21■□□□□ 0.19
Lima1-201ENSMUST00000073691 Cdk11bP24788 784 aaKnown RBP16.16■□□□□ 0.18
Lima1-201ENSMUST00000073691 Nop58Q6DFW4 536 aaKnown RBP16.09■□□□□ 0.17
Lima1-201ENSMUST00000073691 Cep164Q5DU05 1446 aa16.08■□□□□ 0.16
Lima1-201ENSMUST00000073691 Slc24a1Q91WD8 1130 aa16.08■□□□□ 0.16
Lima1-201ENSMUST00000073691 Plekhg3Q4VAC9 1341 aa16.05■□□□□ 0.16
Lima1-201ENSMUST00000073691 Fam50aQ9WV03 339 aaKnown RBP16.05■□□□□ 0.16
Lima1-201ENSMUST00000073691 CenpbP27790 599 aa16.04■□□□□ 0.16
Lima1-201ENSMUST00000073691 Neurod1Q60867 357 aa16.02■□□□□ 0.15
Lima1-201ENSMUST00000073691 Sall2Q9QX96 1004 aa15.99■□□□□ 0.15
Lima1-201ENSMUST00000073691 TonslQ6NZL6 1363 aa15.99■□□□□ 0.15
Lima1-201ENSMUST00000073691 Brd4Q9ESU6 1400 aaKnown RBP15.92■□□□□ 0.14
Lima1-201ENSMUST00000073691 NclP09405 707 aaKnown RBP15.89■□□□□ 0.14
Lima1-201ENSMUST00000073691 Eid3Q3V124 375 aa15.86■□□□□ 0.13
Lima1-201ENSMUST00000073691 Baz1aO88379 1555 aa15.85■□□□□ 0.13
Lima1-201ENSMUST00000073691 Lmod2Q3UHZ5 550 aa15.83■□□□□ 0.12
Lima1-201ENSMUST00000073691 Mapk8ip2Q9ERE9 830 aa15.8■□□□□ 0.12
Lima1-201ENSMUST00000073691 ClspnQ80YR7 1315 aa15.79■□□□□ 0.12
Lima1-201ENSMUST00000073691 NacadQ5SWP3 1504 aa15.78■□□□□ 0.12
Lima1-201ENSMUST00000073691 Stra8P70278 393 aa15.78■□□□□ 0.12
Lima1-201ENSMUST00000073691 Pelp1Q9DBD5 1123 aaKnown RBP15.74■□□□□ 0.11
Lima1-201ENSMUST00000073691 Gm38655A0A286YDK6 273 aa15.73■□□□□ 0.11
Lima1-201ENSMUST00000073691 Kdm5dQ62240 1548 aa15.73■□□□□ 0.11
Lima1-201ENSMUST00000073691 Rsf1E9PWW9 1441 aaKnown RBP15.73■□□□□ 0.11
Lima1-201ENSMUST00000073691 Clip1Q922J3 1391 aa15.72■□□□□ 0.11
Lima1-201ENSMUST00000073691 Csrnp3P59055 597 aa15.7■□□□□ 0.1
Lima1-201ENSMUST00000073691 Eif5bQ05D44 1216 aaKnown RBP15.65■□□□□ 0.1
Lima1-201ENSMUST00000073691 Aebp2Q9Z248 504 aaKnown RBP15.65■□□□□ 0.1
Lima1-201ENSMUST00000073691 Golga3P55937 1487 aa15.61■□□□□ 0.09
Lima1-201ENSMUST00000073691 Npm1Q61937 292 aaKnown RBP15.6■□□□□ 0.09
Lima1-201ENSMUST00000073691 Tnnt3Q9QZ47 272 aa15.6■□□□□ 0.09
Lima1-201ENSMUST00000073691 Anks4bQ8K3X6 423 aa15.59■□□□□ 0.09
Lima1-201ENSMUST00000073691 ScribQ80U72 1612 aa15.57■□□□□ 0.08
Lima1-201ENSMUST00000073691 Ccdc88bQ4QRL3 1481 aa15.54■□□□□ 0.08
Lima1-201ENSMUST00000073691 NrdcQ8BHG1 1161 aa15.54■□□□□ 0.08
Lima1-201ENSMUST00000073691 Zbtb7cQ8VCZ7 619 aa15.45■□□□□ 0.06
Lima1-201ENSMUST00000073691 Ttbk1Q6PCN3 1308 aa15.42■□□□□ 0.06
Lima1-201ENSMUST00000073691 1700123L14RikQ3V2K7 440 aa15.37■□□□□ 0.05
Lima1-201ENSMUST00000073691 BlmO88700 1416 aa15.36■□□□□ 0.05
Lima1-201ENSMUST00000073691 Zbtb4Q5F293 982 aa15.35■□□□□ 0.05
Lima1-201ENSMUST00000073691 Setd5Q5XJV7 1441 aa15.34■□□□□ 0.05
Lima1-201ENSMUST00000073691 Chic2Q9D9G3 165 aa15.34■□□□□ 0.05
Lima1-201ENSMUST00000073691 Cecr2E9Q2Z1 1453 aa15.31■□□□□ 0.04
Lima1-201ENSMUST00000073691 Aplp2Q06335 707 aa15.29■□□□□ 0.04
Lima1-201ENSMUST00000073691 Ubl4bQ9CQ84 188 aa15.29■□□□□ 0.04
Lima1-201ENSMUST00000073691 Myt1Q8CFC2 1127 aa15.28■□□□□ 0.04
Lima1-201ENSMUST00000073691 Anp32bQ9EST5 272 aaKnown RBP15.26■□□□□ 0.03
Lima1-201ENSMUST00000073691 Os9Q8K2C7 672 aa15.23■□□□□ 0.03
Lima1-201ENSMUST00000073691 Amer1Q7TS75 1132 aa15.22■□□□□ 0.03
Lima1-201ENSMUST00000073691 Smarca2Q6DIC0 1577 aa15.22■□□□□ 0.03
Lima1-201ENSMUST00000073691 Kif15Q6P9L6 1387 aa15.22■□□□□ 0.03
Lima1-201ENSMUST00000073691 Fkbp15Q6P9Q6 1216 aaKnown RBP15.21■□□□□ 0.03
Lima1-201ENSMUST00000073691 Sycp2Q9CUU3 1500 aa15.21■□□□□ 0.03
Lima1-201ENSMUST00000073691 Hnrnpul2Q00PI9 745 aaKnown RBP15.2■□□□□ 0.02
Lima1-201ENSMUST00000073691 Anp32aO35381 247 aa15.2■□□□□ 0.02
Lima1-201ENSMUST00000073691 NeflP08551 543 aa15.18■□□□□ 0.02
Lima1-201ENSMUST00000073691 Cep162Q6ZQ06 1403 aa15.17■□□□□ 0.02
Lima1-201ENSMUST00000073691 Eea1Q8BL66 1411 aa15.17■□□□□ 0.02
Lima1-201ENSMUST00000073691 Ccer2J3QPU5 274 aa15.14■□□□□ 0.01
Lima1-201ENSMUST00000073691 CftrP26361 1476 aa15.14■□□□□ 0.01
Lima1-201ENSMUST00000073691 Crybg2B7ZCC2 1516 aa15.13■□□□□ 0.01
Lima1-201ENSMUST00000073691 Ifnlr1Q8CGK5 535 aa15.12■□□□□ 0.01
Lima1-201ENSMUST00000073691 Calr4Q3TQS0 420 aa15.12■□□□□ 0.01
Lima1-201ENSMUST00000073691 Mrs2Q5NCE8 434 aa15.12■□□□□ 0.01
Lima1-201ENSMUST00000073691 Synj1Q8CHC4 1574 aa15.09■□□□□ 0.01
Lima1-201ENSMUST00000073691 SafbD3YXK2 937 aaKnown RBP15.08■□□□□ 0.01
Lima1-201ENSMUST00000073691 Prdm10Q3UTQ7 1184 aa15.06■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 51.8 ms