RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 NischQ80TM9 1593 aa26.2■■□□□ 1.78
Nkx6-3-201ENSMUST00000071588 Gm35339A0A140LHH9 1649 aa26.1■■□□□ 1.77
Nkx6-3-201ENSMUST00000071588 Abcc9P70170 1546 aa25.39■■□□□ 1.66
Nkx6-3-201ENSMUST00000071588 Abcc8B2RUS7 1588 aa25.09■■□□□ 1.61
Nkx6-3-201ENSMUST00000071588 ScribQ80U72 1612 aa23.76■■□□□ 1.39
Nkx6-3-201ENSMUST00000071588 Rhox8Q6VSS7 320 aa23.53■■□□□ 1.36
Nkx6-3-201ENSMUST00000071588 Rpgrip1Q9EPQ2 1331 aa23.41■■□□□ 1.34
Nkx6-3-201ENSMUST00000071588 Dcaf1Q80TR8 1506 aa23.24■■□□□ 1.31
Nkx6-3-201ENSMUST00000071588 Kdm5dQ62240 1548 aa23.17■■□□□ 1.3
Nkx6-3-201ENSMUST00000071588 NacadQ5SWP3 1504 aa23.1■■□□□ 1.29
Nkx6-3-201ENSMUST00000071588 Rtl1Q7M732 1744 aa22.96■■□□□ 1.27
Nkx6-3-201ENSMUST00000071588 Rb1cc1Q9ESK9 1588 aa22.9■■□□□ 1.26
Nkx6-3-201ENSMUST00000071588 Sycp2Q9CUU3 1500 aa22.62■■□□□ 1.21
Nkx6-3-201ENSMUST00000071588 Baz1aO88379 1555 aa22.6■■□□□ 1.21
Nkx6-3-201ENSMUST00000071588 Ccdc180J3QNE4 1664 aa22.56■■□□□ 1.2
Nkx6-3-201ENSMUST00000071588 Acin1Q9JIX8 1338 aaKnown RBP22.51■■□□□ 1.19
Nkx6-3-201ENSMUST00000071588 Crybg2B7ZCC2 1516 aa22.33■■□□□ 1.16
Nkx6-3-201ENSMUST00000071588 Pcgf6Q99NA9 353 aa22.3■■□□□ 1.16
Nkx6-3-201ENSMUST00000071588 Zcchc6Q5BLK4 1491 aaKnown RBP22.25■■□□□ 1.15
Nkx6-3-201ENSMUST00000071588 BicraF8VPZ9 1578 aa22.2■■□□□ 1.14
Nkx6-3-201ENSMUST00000071588 Smarca2Q6DIC0 1577 aa22.01■■□□□ 1.11
Nkx6-3-201ENSMUST00000071588 Ccdc136Q3TVA9 1136 aa21.91■■□□□ 1.1
Nkx6-3-201ENSMUST00000071588 Cecr2E9Q2Z1 1453 aa21.72■■□□□ 1.07
Nkx6-3-201ENSMUST00000071588 Trim41Q5NCC3 630 aa21.65■■□□□ 1.06
Nkx6-3-201ENSMUST00000071588 Neurod1Q60867 357 aa21.57■■□□□ 1.04
Nkx6-3-201ENSMUST00000071588 Ehmt2Q9Z148 1263 aaKnown RBP21.55■■□□□ 1.04
Nkx6-3-201ENSMUST00000071588 Supt5hO55201 1082 aaKnown RBP21.52■■□□□ 1.04
Nkx6-3-201ENSMUST00000071588 Smarca4Q3TKT4 1613 aaKnown RBP21.48■■□□□ 1.03
Nkx6-3-201ENSMUST00000071588 Brd4Q9ESU6 1400 aaKnown RBP21.47■■□□□ 1.03
Nkx6-3-201ENSMUST00000071588 Las1lA2BE28 776 aaKnown RBP21.44■■□□□ 1.02
Nkx6-3-201ENSMUST00000071588 Pds5bQ4VA53 1446 aaKnown RBP21.41■■□□□ 1.02
Nkx6-3-201ENSMUST00000071588 Synj1Q8CHC4 1574 aa21.37■■□□□ 1.01
Nkx6-3-201ENSMUST00000071588 Atad2bE9Q166 1460 aaKnown RBP21.36■■□□□ 1.01
Nkx6-3-201ENSMUST00000071588 HrcG5E8J6 738 aa21.32■■□□□ 1
Nkx6-3-201ENSMUST00000071588 CftrP26361 1476 aa21.31■■□□□ 1
Nkx6-3-201ENSMUST00000071588 Iqgap2Q3UQ44 1575 aa21.28■■□□□ 1
Nkx6-3-201ENSMUST00000071588 Myt1Q8CFC2 1127 aa21.24■□□□□ 0.99
Nkx6-3-201ENSMUST00000071588 Cttnbp2B9EJA2 1648 aa21.24■□□□□ 0.99
Nkx6-3-201ENSMUST00000071588 1700123L14RikQ3V2K7 440 aa21.19■□□□□ 0.98
Nkx6-3-201ENSMUST00000071588 Esf1Q3V1V3 845 aaKnown RBP21.13■□□□□ 0.97
Nkx6-3-201ENSMUST00000071588 CenpbP27790 599 aa21.09■□□□□ 0.97
Nkx6-3-201ENSMUST00000071588 Cngb1E1AZ71 1325 aa21.04■□□□□ 0.96
Nkx6-3-201ENSMUST00000071588 Ercc6F8VPZ5 1481 aa21.02■□□□□ 0.96
Nkx6-3-201ENSMUST00000071588 Golga3P55937 1487 aa20.99■□□□□ 0.95
Nkx6-3-201ENSMUST00000071588 Wdr62Q3U3T8 1523 aa20.97■□□□□ 0.95
Nkx6-3-201ENSMUST00000071588 Frmpd1A2AKB4 1549 aa20.96■□□□□ 0.95
Nkx6-3-201ENSMUST00000071588 Thoc2B1AZI6 1594 aaKnown RBP20.94■□□□□ 0.94
Nkx6-3-201ENSMUST00000071588 Anks4bQ8K3X6 423 aa20.92■□□□□ 0.94
Nkx6-3-201ENSMUST00000071588 Csrnp3P59055 597 aa20.86■□□□□ 0.93
Nkx6-3-201ENSMUST00000071588 Top2bQ64511 1612 aa20.83■□□□□ 0.92
Nkx6-3-201ENSMUST00000071588 Dnajc5bQ9CQ94 199 aa20.8■□□□□ 0.92
Nkx6-3-201ENSMUST00000071588 DiexfQ8BTT6 772 aaKnown RBP20.8■□□□□ 0.92
Nkx6-3-201ENSMUST00000071588 Cep164Q5DU05 1446 aa20.76■□□□□ 0.91
Nkx6-3-201ENSMUST00000071588 Aplp2Q06335 707 aa20.72■□□□□ 0.91
Nkx6-3-201ENSMUST00000071588 Cc2d2aQ8CFW7 1633 aa20.7■□□□□ 0.9
Nkx6-3-201ENSMUST00000071588 Rsf1E9PWW9 1441 aaKnown RBP20.69■□□□□ 0.9
Nkx6-3-201ENSMUST00000071588 Unc13aQ4KUS2 1712 aa20.67■□□□□ 0.9
Nkx6-3-201ENSMUST00000071588 Ccdc88bQ4QRL3 1481 aa20.67■□□□□ 0.9
Nkx6-3-201ENSMUST00000071588 Phldb1Q6PDH0 1371 aaKnown RBP20.67■□□□□ 0.9
Nkx6-3-201ENSMUST00000071588 Chic1Q8CBW7 227 aa20.66■□□□□ 0.9
Nkx6-3-201ENSMUST00000071588 Sall2Q9QX96 1004 aa20.61■□□□□ 0.89
Nkx6-3-201ENSMUST00000071588 Fam135aQ6NS59 1506 aa20.61■□□□□ 0.89
Nkx6-3-201ENSMUST00000071588 Fmn1Q05860 1466 aa20.58■□□□□ 0.89
Nkx6-3-201ENSMUST00000071588 Zeb1Q64318 1117 aa20.57■□□□□ 0.88
Nkx6-3-201ENSMUST00000071588 Bcl11aQ9QYE3 773 aa20.54■□□□□ 0.88
Nkx6-3-201ENSMUST00000071588 Ubl4bQ9CQ84 188 aa20.53■□□□□ 0.88
Nkx6-3-201ENSMUST00000071588 Kif15Q6P9L6 1387 aa20.52■□□□□ 0.87
Nkx6-3-201ENSMUST00000071588 Lamc3Q9R0B6 1581 aa20.49■□□□□ 0.87
Nkx6-3-201ENSMUST00000071588 TnnQ80Z71 1560 aa20.47■□□□□ 0.87
Nkx6-3-201ENSMUST00000071588 NefmP08553 848 aa20.45■□□□□ 0.86
Nkx6-3-201ENSMUST00000071588 Gab3Q8BSM5 595 aa20.37■□□□□ 0.85
Nkx6-3-201ENSMUST00000071588 Top2aQ01320 1528 aaKnown RBP20.34■□□□□ 0.85
Nkx6-3-201ENSMUST00000071588 Cux2P70298 1426 aa20.32■□□□□ 0.84
Nkx6-3-201ENSMUST00000071588 Il27Q8K3I6 234 aa20.31■□□□□ 0.84
Nkx6-3-201ENSMUST00000071588 Baz1bQ9Z277 1479 aa20.26■□□□□ 0.83
Nkx6-3-201ENSMUST00000071588 Camsap1A2AHC3 1581 aa20.23■□□□□ 0.83
Nkx6-3-201ENSMUST00000071588 Ccdc18Q640L5 1455 aa20.23■□□□□ 0.83
Nkx6-3-201ENSMUST00000071588 Cdk11bP24788 784 aaKnown RBP20.21■□□□□ 0.83
Nkx6-3-201ENSMUST00000071588 Npm1Q61937 292 aaKnown RBP20.2■□□□□ 0.82
Nkx6-3-201ENSMUST00000071588 Mrc2Q64449 1479 aa20.18■□□□□ 0.82
Nkx6-3-201ENSMUST00000071588 Mier1Q5UAK0 511 aa20.13■□□□□ 0.81
Nkx6-3-201ENSMUST00000071588 Gm38655A0A286YDK6 273 aa20.11■□□□□ 0.81
Nkx6-3-201ENSMUST00000071588 Nop58Q6DFW4 536 aaKnown RBP20.11■□□□□ 0.81
Nkx6-3-201ENSMUST00000071588 Rapgef2Q8CHG7 1496 aa20.05■□□□□ 0.8
Nkx6-3-201ENSMUST00000071588 Grin2bQ01097 1482 aa20.04■□□□□ 0.8
Nkx6-3-201ENSMUST00000071588 Npm2Q80W85 207 aa20.03■□□□□ 0.8
Nkx6-3-201ENSMUST00000071588 LrpprcQ6PB66 1392 aaKnown RBP20.02■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 PrkcshO08795 521 aa20■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 PtprkP35822 1457 aa19.99■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 NrkQ9R0G8 1455 aa19.98■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 Fam71e1A1L3C1 212 aa19.97■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 Aebp2Q9Z248 504 aaKnown RBP19.97■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 Kif21aQ9QXL2 1672 aa19.96■□□□□ 0.79
Nkx6-3-201ENSMUST00000071588 Shroom4Q1W617 1475 aa19.95■□□□□ 0.78
Nkx6-3-201ENSMUST00000071588 PogzQ8BZH4 1409 aaKnown RBP19.94■□□□□ 0.78
Nkx6-3-201ENSMUST00000071588 Dhx29Q6PGC1 1365 aaKnown RBP19.94■□□□□ 0.78
Nkx6-3-201ENSMUST00000071588 ClspnQ80YR7 1315 aa19.93■□□□□ 0.78
Nkx6-3-201ENSMUST00000071588 Cep162Q6ZQ06 1403 aa19.91■□□□□ 0.78
Nkx6-3-201ENSMUST00000071588 Duox2A2AQ99 1517 aa19.89■□□□□ 0.77
Nkx6-3-201ENSMUST00000071588 Wdr66E9Q743 1299 aa19.87■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 144.5 ms