RNA–Protein interactions for RNA: ENSMUST00000062202.13

Sned1-201, Transcript of Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sned1, Length 9,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1-201ENSMUST00000062202 Rhox8Q6VSS7 320 aa23.56■■□□□ 1.36
Sned1-201ENSMUST00000062202 Rpgrip1Q9EPQ2 1331 aa22.04■■□□□ 1.12
Sned1-201ENSMUST00000062202 Cngb1E1AZ71 1325 aa21.85■■□□□ 1.09
Sned1-201ENSMUST00000062202 Pelp1Q9DBD5 1123 aaKnown RBP21.6■■□□□ 1.05
Sned1-201ENSMUST00000062202 Las1lA2BE28 776 aaKnown RBP21.56■■□□□ 1.04
Sned1-201ENSMUST00000062202 Wdr66E9Q743 1299 aa21.1■□□□□ 0.97
Sned1-201ENSMUST00000062202 Ehmt2Q9Z148 1263 aaKnown RBP21.08■□□□□ 0.97
Sned1-201ENSMUST00000062202 Ube2uB1AUC4 352 aa21.07■□□□□ 0.96
Sned1-201ENSMUST00000062202 Esf1Q3V1V3 845 aaKnown RBP20.91■□□□□ 0.94
Sned1-201ENSMUST00000062202 Zeb1Q64318 1117 aa20.73■□□□□ 0.91
Sned1-201ENSMUST00000062202 Ccdc136Q3TVA9 1136 aa20.61■□□□□ 0.89
Sned1-201ENSMUST00000062202 Amer1Q7TS75 1132 aa20.59■□□□□ 0.89
Sned1-201ENSMUST00000062202 Npm2Q80W85 207 aa20.58■□□□□ 0.89
Sned1-201ENSMUST00000062202 Trim41Q5NCC3 630 aa20.41■□□□□ 0.86
Sned1-201ENSMUST00000062202 Gab3Q8BSM5 595 aa20.39■□□□□ 0.85
Sned1-201ENSMUST00000062202 Stra8P70278 393 aa20.38■□□□□ 0.85
Sned1-201ENSMUST00000062202 CenpbP27790 599 aa20.35■□□□□ 0.85
Sned1-201ENSMUST00000062202 Myt1lP97500 1187 aa20.27■□□□□ 0.84
Sned1-201ENSMUST00000062202 4930567H17RikQ3V0K5 233 aa20.22■□□□□ 0.83
Sned1-201ENSMUST00000062202 NefmP08553 848 aa20.04■□□□□ 0.8
Sned1-201ENSMUST00000062202 Slc24a1Q91WD8 1130 aa19.92■□□□□ 0.78
Sned1-201ENSMUST00000062202 UbtfP25976 765 aaKnown RBP19.82■□□□□ 0.76
Sned1-201ENSMUST00000062202 Acin1Q9JIX8 1338 aaKnown RBP19.79■□□□□ 0.76
Sned1-201ENSMUST00000062202 Anp32bQ9EST5 272 aaKnown RBP19.78■□□□□ 0.76
Sned1-201ENSMUST00000062202 Rtl1Q7M732 1744 aa19.76■□□□□ 0.75
Sned1-201ENSMUST00000062202 Ccdc180J3QNE4 1664 aa19.71■□□□□ 0.75
Sned1-201ENSMUST00000062202 NeflP08551 543 aa19.7■□□□□ 0.74
Sned1-201ENSMUST00000062202 4933416C03RikQ3V063 378 aa19.69■□□□□ 0.74
Sned1-201ENSMUST00000062202 Ttbk1Q6PCN3 1308 aa19.65■□□□□ 0.74
Sned1-201ENSMUST00000062202 NrdcQ8BHG1 1161 aa19.65■□□□□ 0.74
Sned1-201ENSMUST00000062202 NischQ80TM9 1593 aa19.63■□□□□ 0.73
Sned1-201ENSMUST00000062202 Myt1Q8CFC2 1127 aa19.61■□□□□ 0.73
Sned1-201ENSMUST00000062202 Tnnt3Q9QZ47 272 aa19.57■□□□□ 0.72
Sned1-201ENSMUST00000062202 Cdk11bP24788 784 aaKnown RBP19.56■□□□□ 0.72
Sned1-201ENSMUST00000062202 Os9Q8K2C7 672 aa19.45■□□□□ 0.7
Sned1-201ENSMUST00000062202 NclP09405 707 aaKnown RBP19.36■□□□□ 0.69
Sned1-201ENSMUST00000062202 Il27Q8K3I6 234 aa19.33■□□□□ 0.68
Sned1-201ENSMUST00000062202 Fam50aQ9WV03 339 aaKnown RBP19.32■□□□□ 0.68
Sned1-201ENSMUST00000062202 HrcG5E8J6 738 aa19.3■□□□□ 0.68
Sned1-201ENSMUST00000062202 Neurod1Q60867 357 aa19.3■□□□□ 0.68
Sned1-201ENSMUST00000062202 Eif5bQ05D44 1216 aaKnown RBP19.28■□□□□ 0.68
Sned1-201ENSMUST00000062202 Rtl5Q5DTT4 599 aa19.26■□□□□ 0.67
Sned1-201ENSMUST00000062202 Nop58Q6DFW4 536 aaKnown RBP19.23■□□□□ 0.67
Sned1-201ENSMUST00000062202 Ap3b1Q9Z1T1 1105 aa19.1■□□□□ 0.65
Sned1-201ENSMUST00000062202 TonslQ6NZL6 1363 aa19.02■□□□□ 0.63
Sned1-201ENSMUST00000062202 Pcgf6Q99NA9 353 aa18.99■□□□□ 0.63
Sned1-201ENSMUST00000062202 Gm13697A2AK42 830 aa18.84■□□□□ 0.61
Sned1-201ENSMUST00000062202 Zcchc6Q5BLK4 1491 aaKnown RBP18.82■□□□□ 0.6
Sned1-201ENSMUST00000062202 DaxxO35613 739 aa18.76■□□□□ 0.59
Sned1-201ENSMUST00000062202 Nlrp6Q91WS2 869 aa18.72■□□□□ 0.59
Sned1-201ENSMUST00000062202 Ppargc1bQ8VHJ7 1014 aa18.72■□□□□ 0.59
Sned1-201ENSMUST00000062202 Hdac5Q9Z2V6 1113 aa18.72■□□□□ 0.59
Sned1-201ENSMUST00000062202 Hnrnpul2Q00PI9 745 aaKnown RBP18.7■□□□□ 0.58
Sned1-201ENSMUST00000062202 Anp32aO35381 247 aa18.7■□□□□ 0.58
Sned1-201ENSMUST00000062202 Zbtb7cQ8VCZ7 619 aa18.66■□□□□ 0.58
Sned1-201ENSMUST00000062202 DiexfQ8BTT6 772 aaKnown RBP18.64■□□□□ 0.57
Sned1-201ENSMUST00000062202 Chic1Q8CBW7 227 aa18.62■□□□□ 0.57
Sned1-201ENSMUST00000062202 Atp1b4Q99ME6 356 aa18.6■□□□□ 0.57
Sned1-201ENSMUST00000062202 Supt5hO55201 1082 aaKnown RBP18.59■□□□□ 0.57
Sned1-201ENSMUST00000062202 ClspnQ80YR7 1315 aa18.55■□□□□ 0.56
Sned1-201ENSMUST00000062202 Polr3glQ8R0C0 218 aa18.54■□□□□ 0.56
Sned1-201ENSMUST00000062202 Npm1Q61937 292 aaKnown RBP18.54■□□□□ 0.56
Sned1-201ENSMUST00000062202 CatipB9EKE5 520 aa18.53■□□□□ 0.56
Sned1-201ENSMUST00000062202 Erich6D3Z6S9 713 aa18.52■□□□□ 0.56
Sned1-201ENSMUST00000062202 Gm13695A2AK44 830 aa18.52■□□□□ 0.56
Sned1-201ENSMUST00000062202 Mier1Q5UAK0 511 aa18.52■□□□□ 0.55
Sned1-201ENSMUST00000062202 Lmod2Q3UHZ5 550 aa18.45■□□□□ 0.54
Sned1-201ENSMUST00000062202 Upf2A2AT37 1269 aaKnown RBP18.43■□□□□ 0.54
Sned1-201ENSMUST00000062202 Gm35339A0A140LHH9 1649 aa18.43■□□□□ 0.54
Sned1-201ENSMUST00000062202 Hsp90aa1P07901 733 aaKnown RBP18.41■□□□□ 0.54
Sned1-201ENSMUST00000062202 Abcc9P70170 1546 aa18.41■□□□□ 0.54
Sned1-201ENSMUST00000062202 Zbtb4Q5F293 982 aa18.39■□□□□ 0.53
Sned1-201ENSMUST00000062202 Ifnlr1Q8CGK5 535 aa18.36■□□□□ 0.53
Sned1-201ENSMUST00000062202 ArxO35085 564 aa18.35■□□□□ 0.53
Sned1-201ENSMUST00000062202 Plekhg3Q4VAC9 1341 aa18.34■□□□□ 0.53
Sned1-201ENSMUST00000062202 Prdm10Q3UTQ7 1184 aa18.32■□□□□ 0.52
Sned1-201ENSMUST00000062202 Ythdc1E9Q5K9 736 aaKnown RBP18.2■□□□□ 0.5
Sned1-201ENSMUST00000062202 Ccer2J3QPU5 274 aa18.19■□□□□ 0.5
Sned1-201ENSMUST00000062202 Csrnp3P59055 597 aa18.09■□□□□ 0.49
Sned1-201ENSMUST00000062202 DekQ7TNV0 380 aaKnown RBP18.09■□□□□ 0.49
Sned1-201ENSMUST00000062202 Lmod3E9QA62 571 aa18.07■□□□□ 0.48
Sned1-201ENSMUST00000062202 Ccdc9Q8VC31 543 aaKnown RBP18.07■□□□□ 0.48
Sned1-201ENSMUST00000062202 Fgd1P52734 960 aa18.06■□□□□ 0.48
Sned1-201ENSMUST00000062202 Mapk8ip2Q9ERE9 830 aa18.06■□□□□ 0.48
Sned1-201ENSMUST00000062202 Calr4Q3TQS0 420 aa18.06■□□□□ 0.48
Sned1-201ENSMUST00000062202 Rangap1P46061 589 aaKnown RBP18.04■□□□□ 0.48
Sned1-201ENSMUST00000062202 Trim44Q9QXA7 346 aa18.03■□□□□ 0.48
Sned1-201ENSMUST00000062202 Ppp4r2Q0VGB7 417 aa18.03■□□□□ 0.48
Sned1-201ENSMUST00000062202 Clip1Q922J3 1391 aa18.03■□□□□ 0.48
Sned1-201ENSMUST00000062202 Znf326O88291 580 aa18.02■□□□□ 0.47
Sned1-201ENSMUST00000062202 Plppr3Q7TPB0 716 aa18■□□□□ 0.47
Sned1-201ENSMUST00000062202 Fkbp15Q6P9Q6 1216 aaKnown RBP18■□□□□ 0.47
Sned1-201ENSMUST00000062202 Eid3Q3V124 375 aa17.99■□□□□ 0.47
Sned1-201ENSMUST00000062202 Clstn2Q9ER65 966 aa17.98■□□□□ 0.47
Sned1-201ENSMUST00000062202 Anks4bQ8K3X6 423 aa17.97■□□□□ 0.47
Sned1-201ENSMUST00000062202 Rad21Q61550 635 aaKnown RBP17.95■□□□□ 0.46
Sned1-201ENSMUST00000062202 Brd4Q9ESU6 1400 aaKnown RBP17.95■□□□□ 0.46
Sned1-201ENSMUST00000062202 Safb2Q80YR5 991 aaKnown RBP17.94■□□□□ 0.46
Sned1-201ENSMUST00000062202 Wdr43Q6ZQL4 677 aaKnown RBP17.93■□□□□ 0.46
Sned1-201ENSMUST00000062202 Aplp2Q06335 707 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms