RNA–Protein interactions for RNA: ENSMUST00000061279.9

Pcdhga11-201, Transcript of Protocadherin gamma A11, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhga11, Length 4,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11-201ENSMUST00000061279 Rpgrip1Q9EPQ2 1331 aa20.55■□□□□ 0.88
Pcdhga11-201ENSMUST00000061279 Rhox8Q6VSS7 320 aa20.43■□□□□ 0.86
Pcdhga11-201ENSMUST00000061279 Ehmt2Q9Z148 1263 aaKnown RBP20.41■□□□□ 0.86
Pcdhga11-201ENSMUST00000061279 Acin1Q9JIX8 1338 aaKnown RBP20.1■□□□□ 0.81
Pcdhga11-201ENSMUST00000061279 Pcgf6Q99NA9 353 aa20.09■□□□□ 0.81
Pcdhga11-201ENSMUST00000061279 NischQ80TM9 1593 aa19.96■□□□□ 0.79
Pcdhga11-201ENSMUST00000061279 Supt5hO55201 1082 aaKnown RBP19.59■□□□□ 0.73
Pcdhga11-201ENSMUST00000061279 Ccdc180J3QNE4 1664 aa19.55■□□□□ 0.72
Pcdhga11-201ENSMUST00000061279 Neurod1Q60867 357 aa19.48■□□□□ 0.71
Pcdhga11-201ENSMUST00000061279 Rtl1Q7M732 1744 aa19.4■□□□□ 0.7
Pcdhga11-201ENSMUST00000061279 Abcc9P70170 1546 aa19.2■□□□□ 0.66
Pcdhga11-201ENSMUST00000061279 Zeb1Q64318 1117 aa19.16■□□□□ 0.66
Pcdhga11-201ENSMUST00000061279 Trim41Q5NCC3 630 aa19.11■□□□□ 0.65
Pcdhga11-201ENSMUST00000061279 Las1lA2BE28 776 aaKnown RBP19.06■□□□□ 0.64
Pcdhga11-201ENSMUST00000061279 1700123L14RikQ3V2K7 440 aa19.01■□□□□ 0.63
Pcdhga11-201ENSMUST00000061279 Csrnp3P59055 597 aa18.95■□□□□ 0.62
Pcdhga11-201ENSMUST00000061279 Dcaf1Q80TR8 1506 aa18.94■□□□□ 0.62
Pcdhga11-201ENSMUST00000061279 Ccdc136Q3TVA9 1136 aa18.89■□□□□ 0.61
Pcdhga11-201ENSMUST00000061279 Cngb1E1AZ71 1325 aa18.87■□□□□ 0.61
Pcdhga11-201ENSMUST00000061279 Zcchc6Q5BLK4 1491 aaKnown RBP18.85■□□□□ 0.61
Pcdhga11-201ENSMUST00000061279 HrcG5E8J6 738 aa18.8■□□□□ 0.6
Pcdhga11-201ENSMUST00000061279 Gm38655A0A286YDK6 273 aa18.75■□□□□ 0.59
Pcdhga11-201ENSMUST00000061279 Sall2Q9QX96 1004 aa18.74■□□□□ 0.59
Pcdhga11-201ENSMUST00000061279 CenpbP27790 599 aa18.71■□□□□ 0.59
Pcdhga11-201ENSMUST00000061279 Ppargc1bQ8VHJ7 1014 aa18.59■□□□□ 0.57
Pcdhga11-201ENSMUST00000061279 Anks4bQ8K3X6 423 aa18.58■□□□□ 0.56
Pcdhga11-201ENSMUST00000061279 Abcc8B2RUS7 1588 aa18.57■□□□□ 0.56
Pcdhga11-201ENSMUST00000061279 Gm35339A0A140LHH9 1649 aa18.51■□□□□ 0.55
Pcdhga11-201ENSMUST00000061279 Wdr66E9Q743 1299 aa18.5■□□□□ 0.55
Pcdhga11-201ENSMUST00000061279 DiexfQ8BTT6 772 aaKnown RBP18.5■□□□□ 0.55
Pcdhga11-201ENSMUST00000061279 Mier1Q5UAK0 511 aa18.38■□□□□ 0.53
Pcdhga11-201ENSMUST00000061279 Gab3Q8BSM5 595 aa18.36■□□□□ 0.53
Pcdhga11-201ENSMUST00000061279 Myt1Q8CFC2 1127 aa18.34■□□□□ 0.53
Pcdhga11-201ENSMUST00000061279 NefmP08553 848 aa18.32■□□□□ 0.52
Pcdhga11-201ENSMUST00000061279 Cdk11bP24788 784 aaKnown RBP18.3■□□□□ 0.52
Pcdhga11-201ENSMUST00000061279 Aplp2Q06335 707 aa18.3■□□□□ 0.52
Pcdhga11-201ENSMUST00000061279 Nop58Q6DFW4 536 aaKnown RBP18.27■□□□□ 0.51
Pcdhga11-201ENSMUST00000061279 Bcl11aQ9QYE3 773 aa18.26■□□□□ 0.51
Pcdhga11-201ENSMUST00000061279 Aebp2Q9Z248 504 aaKnown RBP18.26■□□□□ 0.51
Pcdhga11-201ENSMUST00000061279 Mapk8ip2Q9ERE9 830 aa18.12■□□□□ 0.49
Pcdhga11-201ENSMUST00000061279 Fam71e1A1L3C1 212 aa18.07■□□□□ 0.48
Pcdhga11-201ENSMUST00000061279 SafbD3YXK2 937 aaKnown RBP18■□□□□ 0.47
Pcdhga11-201ENSMUST00000061279 PrkcshO08795 521 aa17.99■□□□□ 0.47
Pcdhga11-201ENSMUST00000061279 Ifnlr1Q8CGK5 535 aa17.99■□□□□ 0.47
Pcdhga11-201ENSMUST00000061279 UbtfP25976 765 aaKnown RBP17.98■□□□□ 0.47
Pcdhga11-201ENSMUST00000061279 Cep164Q5DU05 1446 aa17.93■□□□□ 0.46
Pcdhga11-201ENSMUST00000061279 Chic1Q8CBW7 227 aa17.9■□□□□ 0.46
Pcdhga11-201ENSMUST00000061279 ClspnQ80YR7 1315 aa17.9■□□□□ 0.46
Pcdhga11-201ENSMUST00000061279 Hnrnpul2Q00PI9 745 aaKnown RBP17.83■□□□□ 0.44
Pcdhga11-201ENSMUST00000061279 Ap3b1Q9Z1T1 1105 aa17.79■□□□□ 0.44
Pcdhga11-201ENSMUST00000061279 TonslQ6NZL6 1363 aa17.61■□□□□ 0.41
Pcdhga11-201ENSMUST00000061279 Rsf1E9PWW9 1441 aaKnown RBP17.6■□□□□ 0.41
Pcdhga11-201ENSMUST00000061279 Ttbk1Q6PCN3 1308 aa17.58■□□□□ 0.4
Pcdhga11-201ENSMUST00000061279 Rb1cc1Q9ESK9 1588 aa17.57■□□□□ 0.4
Pcdhga11-201ENSMUST00000061279 Myt1lP97500 1187 aa17.44■□□□□ 0.38
Pcdhga11-201ENSMUST00000061279 Tnnt3Q9QZ47 272 aa17.43■□□□□ 0.38
Pcdhga11-201ENSMUST00000061279 Anp32aO35381 247 aa17.4■□□□□ 0.38
Pcdhga11-201ENSMUST00000061279 Amer1Q7TS75 1132 aa17.4■□□□□ 0.38
Pcdhga11-201ENSMUST00000061279 Eid3Q3V124 375 aa17.4■□□□□ 0.38
Pcdhga11-201ENSMUST00000061279 Ccdc88bQ4QRL3 1481 aa17.37■□□□□ 0.37
Pcdhga11-201ENSMUST00000061279 Nolc1E9Q5C9 702 aaKnown RBP17.36■□□□□ 0.37
Pcdhga11-201ENSMUST00000061279 Slc24a1Q91WD8 1130 aa17.3■□□□□ 0.36
Pcdhga11-201ENSMUST00000061279 Plekhg3Q4VAC9 1341 aa17.26■□□□□ 0.35
Pcdhga11-201ENSMUST00000061279 Baz1aO88379 1555 aa17.23■□□□□ 0.35
Pcdhga11-201ENSMUST00000061279 Hdac5Q9Z2V6 1113 aa17.21■□□□□ 0.35
Pcdhga11-201ENSMUST00000061279 Esf1Q3V1V3 845 aaKnown RBP17.19■□□□□ 0.34
Pcdhga11-201ENSMUST00000061279 Calr4Q3TQS0 420 aa17.18■□□□□ 0.34
Pcdhga11-201ENSMUST00000061279 Pelp1Q9DBD5 1123 aaKnown RBP17.15■□□□□ 0.34
Pcdhga11-201ENSMUST00000061279 Supt16hQ920B9 1047 aa17.15■□□□□ 0.34
Pcdhga11-201ENSMUST00000061279 Znf710Q3U288 666 aa17.13■□□□□ 0.33
Pcdhga11-201ENSMUST00000061279 Ppp4r2Q0VGB7 417 aa17.12■□□□□ 0.33
Pcdhga11-201ENSMUST00000061279 Eif5bQ05D44 1216 aaKnown RBP17.1■□□□□ 0.33
Pcdhga11-201ENSMUST00000061279 Il27Q8K3I6 234 aa17.09■□□□□ 0.33
Pcdhga11-201ENSMUST00000061279 Rtl5Q5DTT4 599 aa17.07■□□□□ 0.32
Pcdhga11-201ENSMUST00000061279 NclP09405 707 aaKnown RBP17■□□□□ 0.31
Pcdhga11-201ENSMUST00000061279 Pak3Q61036 559 aa16.98■□□□□ 0.31
Pcdhga11-201ENSMUST00000061279 Npm2Q80W85 207 aa16.98■□□□□ 0.31
Pcdhga11-201ENSMUST00000061279 Stra8P70278 393 aa16.97■□□□□ 0.31
Pcdhga11-201ENSMUST00000061279 Plcd4Q8K3R3 807 aa16.94■□□□□ 0.3
Pcdhga11-201ENSMUST00000061279 P3h3Q8CG70 732 aa16.92■□□□□ 0.3
Pcdhga11-201ENSMUST00000061279 Wdr43Q6ZQL4 677 aaKnown RBP16.92■□□□□ 0.3
Pcdhga11-201ENSMUST00000061279 Golga3P55937 1487 aa16.91■□□□□ 0.3
Pcdhga11-201ENSMUST00000061279 ScribQ80U72 1612 aa16.89■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Slc4a3P16283 1227 aa16.89■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Kdm5dQ62240 1548 aa16.88■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Smarca2Q6DIC0 1577 aa16.88■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Rpap1Q80TE0 1409 aa16.88■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Upf2A2AT37 1269 aaKnown RBP16.87■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Gtf3c3Q3TMP1 882 aa16.85■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Clip1Q922J3 1391 aa16.84■□□□□ 0.29
Pcdhga11-201ENSMUST00000061279 Brd4Q9ESU6 1400 aaKnown RBP16.76■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Ccdc27Q3V036 639 aa16.76■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Sin3aQ60520 1274 aaKnown RBP16.76■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Fam50aQ9WV03 339 aaKnown RBP16.75■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Fgd1P52734 960 aa16.74■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 4933416C03RikQ3V063 378 aa16.74■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Pknox2Q8BG99 474 aa16.73■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Ncapd3Q6ZQK0 1506 aa16.72■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Liat1Q810M6 228 aa16.71■□□□□ 0.27
Pcdhga11-201ENSMUST00000061279 Irx3P81067 507 aa16.7■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 87.5 ms