RNA–Protein interactions for RNA: ENSMUST00000060274.6

Traf3-202, Transcript of TNF receptor-associated factor 3, mousemouse

TSL 5 BASIC

Gene Traf3, Length 6,896 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-202ENSMUST00000060274 Rhox8Q6VSS7 320 aa15.08■□□□□ 0.01
Traf3-202ENSMUST00000060274 Cngb1E1AZ71 1325 aa14.42□□□□□ -0.1
Traf3-202ENSMUST00000060274 Pelp1Q9DBD5 1123 aaKnown RBP14.41□□□□□ -0.1
Traf3-202ENSMUST00000060274 Amer1Q7TS75 1132 aa14.24□□□□□ -0.13
Traf3-202ENSMUST00000060274 Rpgrip1Q9EPQ2 1331 aa14.18□□□□□ -0.14
Traf3-202ENSMUST00000060274 Las1lA2BE28 776 aaKnown RBP14.15□□□□□ -0.14
Traf3-202ENSMUST00000060274 Ehmt2Q9Z148 1263 aaKnown RBP14.07□□□□□ -0.16
Traf3-202ENSMUST00000060274 Wdr66E9Q743 1299 aa13.97□□□□□ -0.17
Traf3-202ENSMUST00000060274 Ube2uB1AUC4 352 aa13.94□□□□□ -0.18
Traf3-202ENSMUST00000060274 4930567H17RikQ3V0K5 233 aa13.86□□□□□ -0.19
Traf3-202ENSMUST00000060274 Zeb1Q64318 1117 aa13.58□□□□□ -0.24
Traf3-202ENSMUST00000060274 Ttbk1Q6PCN3 1308 aa13.44□□□□□ -0.26
Traf3-202ENSMUST00000060274 CenpbP27790 599 aa13.42□□□□□ -0.26
Traf3-202ENSMUST00000060274 Slc24a1Q91WD8 1130 aa13.32□□□□□ -0.28
Traf3-202ENSMUST00000060274 4933416C03RikQ3V063 378 aa13.3□□□□□ -0.28
Traf3-202ENSMUST00000060274 Esf1Q3V1V3 845 aaKnown RBP13.3□□□□□ -0.28
Traf3-202ENSMUST00000060274 Npm2Q80W85 207 aa13.2□□□□□ -0.3
Traf3-202ENSMUST00000060274 Gab3Q8BSM5 595 aa13.17□□□□□ -0.3
Traf3-202ENSMUST00000060274 Acin1Q9JIX8 1338 aaKnown RBP13.13□□□□□ -0.31
Traf3-202ENSMUST00000060274 Stra8P70278 393 aa13.1□□□□□ -0.31
Traf3-202ENSMUST00000060274 Myt1lP97500 1187 aa13.09□□□□□ -0.31
Traf3-202ENSMUST00000060274 Pcgf6Q99NA9 353 aa13.05□□□□□ -0.32
Traf3-202ENSMUST00000060274 Ccdc136Q3TVA9 1136 aa13.01□□□□□ -0.33
Traf3-202ENSMUST00000060274 Plppr3Q7TPB0 716 aa12.97□□□□□ -0.33
Traf3-202ENSMUST00000060274 Myt1Q8CFC2 1127 aa12.96□□□□□ -0.33
Traf3-202ENSMUST00000060274 DiexfQ8BTT6 772 aaKnown RBP12.95□□□□□ -0.34
Traf3-202ENSMUST00000060274 NeflP08551 543 aa12.88□□□□□ -0.35
Traf3-202ENSMUST00000060274 Eif5bQ05D44 1216 aaKnown RBP12.79□□□□□ -0.36
Traf3-202ENSMUST00000060274 NrdcQ8BHG1 1161 aa12.79□□□□□ -0.36
Traf3-202ENSMUST00000060274 Anp32bQ9EST5 272 aaKnown RBP12.78□□□□□ -0.36
Traf3-202ENSMUST00000060274 UbtfP25976 765 aaKnown RBP12.77□□□□□ -0.37
Traf3-202ENSMUST00000060274 Os9Q8K2C7 672 aa12.76□□□□□ -0.37
Traf3-202ENSMUST00000060274 Supt5hO55201 1082 aaKnown RBP12.74□□□□□ -0.37
Traf3-202ENSMUST00000060274 Cdk11bP24788 784 aaKnown RBP12.74□□□□□ -0.37
Traf3-202ENSMUST00000060274 Neurod1Q60867 357 aa12.69□□□□□ -0.38
Traf3-202ENSMUST00000060274 Ppargc1bQ8VHJ7 1014 aa12.66□□□□□ -0.38
Traf3-202ENSMUST00000060274 CatipB9EKE5 520 aa12.66□□□□□ -0.38
Traf3-202ENSMUST00000060274 NefmP08553 848 aa12.64□□□□□ -0.39
Traf3-202ENSMUST00000060274 Nop58Q6DFW4 536 aaKnown RBP12.58□□□□□ -0.4
Traf3-202ENSMUST00000060274 Trim41Q5NCC3 630 aa12.58□□□□□ -0.4
Traf3-202ENSMUST00000060274 HrcG5E8J6 738 aa12.55□□□□□ -0.4
Traf3-202ENSMUST00000060274 Tnnt3Q9QZ47 272 aa12.55□□□□□ -0.4
Traf3-202ENSMUST00000060274 Gm38655A0A286YDK6 273 aa12.54□□□□□ -0.4
Traf3-202ENSMUST00000060274 Ifnlr1Q8CGK5 535 aa12.53□□□□□ -0.4
Traf3-202ENSMUST00000060274 DaxxO35613 739 aa12.51□□□□□ -0.41
Traf3-202ENSMUST00000060274 NclP09405 707 aaKnown RBP12.47□□□□□ -0.41
Traf3-202ENSMUST00000060274 Chic1Q8CBW7 227 aa12.44□□□□□ -0.42
Traf3-202ENSMUST00000060274 Ythdc1E9Q5K9 736 aaKnown RBP12.43□□□□□ -0.42
Traf3-202ENSMUST00000060274 Fam50aQ9WV03 339 aaKnown RBP12.42□□□□□ -0.42
Traf3-202ENSMUST00000060274 Csrnp3P59055 597 aa12.42□□□□□ -0.42
Traf3-202ENSMUST00000060274 Rtl5Q5DTT4 599 aa12.41□□□□□ -0.42
Traf3-202ENSMUST00000060274 Lmod3E9QA62 571 aa12.39□□□□□ -0.43
Traf3-202ENSMUST00000060274 ArxO35085 564 aa12.37□□□□□ -0.43
Traf3-202ENSMUST00000060274 Il27Q8K3I6 234 aa12.34□□□□□ -0.43
Traf3-202ENSMUST00000060274 Gm13697A2AK42 830 aa12.32□□□□□ -0.44
Traf3-202ENSMUST00000060274 Ap3b1Q9Z1T1 1105 aa12.31□□□□□ -0.44
Traf3-202ENSMUST00000060274 Upf2A2AT37 1269 aaKnown RBP12.27□□□□□ -0.44
Traf3-202ENSMUST00000060274 Polr3glQ8R0C0 218 aa12.27□□□□□ -0.44
Traf3-202ENSMUST00000060274 Zbtb7cQ8VCZ7 619 aa12.25□□□□□ -0.45
Traf3-202ENSMUST00000060274 Ccdc180J3QNE4 1664 aa12.25□□□□□ -0.45
Traf3-202ENSMUST00000060274 Hsp90aa1P07901 733 aaKnown RBP12.25□□□□□ -0.45
Traf3-202ENSMUST00000060274 Anp32aO35381 247 aa12.2□□□□□ -0.46
Traf3-202ENSMUST00000060274 Prdm10Q3UTQ7 1184 aa12.18□□□□□ -0.46
Traf3-202ENSMUST00000060274 Atp1b4Q99ME6 356 aa12.17□□□□□ -0.46
Traf3-202ENSMUST00000060274 Nlrp6Q91WS2 869 aa12.17□□□□□ -0.46
Traf3-202ENSMUST00000060274 Zbtb4Q5F293 982 aa12.15□□□□□ -0.46
Traf3-202ENSMUST00000060274 Hnrnpul2Q00PI9 745 aaKnown RBP12.13□□□□□ -0.47
Traf3-202ENSMUST00000060274 Anks4bQ8K3X6 423 aa12.13□□□□□ -0.47
Traf3-202ENSMUST00000060274 Aplp2Q06335 707 aa12.1□□□□□ -0.47
Traf3-202ENSMUST00000060274 Bcl11aQ9QYE3 773 aa12.09□□□□□ -0.47
Traf3-202ENSMUST00000060274 Mier1Q5UAK0 511 aa12.08□□□□□ -0.48
Traf3-202ENSMUST00000060274 TonslQ6NZL6 1363 aa12.08□□□□□ -0.48
Traf3-202ENSMUST00000060274 1700123L14RikQ3V2K7 440 aa12.08□□□□□ -0.48
Traf3-202ENSMUST00000060274 Rangap1P46061 589 aaKnown RBP12.07□□□□□ -0.48
Traf3-202ENSMUST00000060274 Gm13695A2AK44 830 aa12.07□□□□□ -0.48
Traf3-202ENSMUST00000060274 Vsig10D3YX43 558 aa12.06□□□□□ -0.48
Traf3-202ENSMUST00000060274 Mapk8ip2Q9ERE9 830 aa12.05□□□□□ -0.48
Traf3-202ENSMUST00000060274 Sall2Q9QX96 1004 aa12.05□□□□□ -0.48
Traf3-202ENSMUST00000060274 Erich6D3Z6S9 713 aa12.03□□□□□ -0.48
Traf3-202ENSMUST00000060274 DekQ7TNV0 380 aaKnown RBP12.01□□□□□ -0.49
Traf3-202ENSMUST00000060274 ClspnQ80YR7 1315 aa11.99□□□□□ -0.49
Traf3-202ENSMUST00000060274 Znf326O88291 580 aa11.99□□□□□ -0.49
Traf3-202ENSMUST00000060274 Rtl1Q7M732 1744 aa11.97□□□□□ -0.49
Traf3-202ENSMUST00000060274 Fam71e1A1L3C1 212 aa11.95□□□□□ -0.5
Traf3-202ENSMUST00000060274 Ecm2Q5FW85 670 aa11.92□□□□□ -0.5
Traf3-202ENSMUST00000060274 Trim44Q9QXA7 346 aa11.89□□□□□ -0.51
Traf3-202ENSMUST00000060274 Ppp4r2Q0VGB7 417 aa11.87□□□□□ -0.51
Traf3-202ENSMUST00000060274 Slc4a1apE9PX68 744 aa11.81□□□□□ -0.52
Traf3-202ENSMUST00000060274 Fgd1P52734 960 aa11.81□□□□□ -0.52
Traf3-202ENSMUST00000060274 Gm35339A0A140LHH9 1649 aa11.8□□□□□ -0.52
Traf3-202ENSMUST00000060274 Calr4Q3TQS0 420 aa11.8□□□□□ -0.52
Traf3-202ENSMUST00000060274 NischQ80TM9 1593 aa11.8□□□□□ -0.52
Traf3-202ENSMUST00000060274 Fkbp15Q6P9Q6 1216 aaKnown RBP11.8□□□□□ -0.52
Traf3-202ENSMUST00000060274 Lmod2Q3UHZ5 550 aa11.79□□□□□ -0.52
Traf3-202ENSMUST00000060274 Znf316Q6PGE4 1016 aa11.79□□□□□ -0.52
Traf3-202ENSMUST00000060274 PtmaP26350 111 aa11.78□□□□□ -0.52
Traf3-202ENSMUST00000060274 Prm3Q62100 101 aa11.77□□□□□ -0.52
Traf3-202ENSMUST00000060274 BccipQ9CWI3 316 aa11.74□□□□□ -0.53
Traf3-202ENSMUST00000060274 Clstn1Q9EPL2 979 aa11.74□□□□□ -0.53
Traf3-202ENSMUST00000060274 Arid4bA2CG63 1314 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms