RNA–Protein interactions for RNA: ENSMUST00000056915.2

Pcdhb13-201, Transcript of Protocadherin beta 13, mousemouse

APPRIS P1 BASIC

Gene Pcdhb13, Length 3,710 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13-201ENSMUST00000056915 Rhox8Q6VSS7 320 aa12.7□□□□□ -0.38
Pcdhb13-201ENSMUST00000056915 NischQ80TM9 1593 aa12.28□□□□□ -0.44
Pcdhb13-201ENSMUST00000056915 Ehmt2Q9Z148 1263 aaKnown RBP11.93□□□□□ -0.5
Pcdhb13-201ENSMUST00000056915 Abcc9P70170 1546 aa11.88□□□□□ -0.51
Pcdhb13-201ENSMUST00000056915 Gm35339A0A140LHH9 1649 aa11.69□□□□□ -0.54
Pcdhb13-201ENSMUST00000056915 Ccdc136Q3TVA9 1136 aa11.69□□□□□ -0.54
Pcdhb13-201ENSMUST00000056915 DiexfQ8BTT6 772 aaKnown RBP11.61□□□□□ -0.55
Pcdhb13-201ENSMUST00000056915 Amer1Q7TS75 1132 aa11.59□□□□□ -0.55
Pcdhb13-201ENSMUST00000056915 Abcc8B2RUS7 1588 aa11.45□□□□□ -0.58
Pcdhb13-201ENSMUST00000056915 Rpgrip1Q9EPQ2 1331 aa11.36□□□□□ -0.59
Pcdhb13-201ENSMUST00000056915 Trim41Q5NCC3 630 aa11.29□□□□□ -0.6
Pcdhb13-201ENSMUST00000056915 Gab3Q8BSM5 595 aa11.26□□□□□ -0.61
Pcdhb13-201ENSMUST00000056915 Acin1Q9JIX8 1338 aaKnown RBP11.23□□□□□ -0.61
Pcdhb13-201ENSMUST00000056915 Ccdc180J3QNE4 1664 aa11.23□□□□□ -0.61
Pcdhb13-201ENSMUST00000056915 Las1lA2BE28 776 aaKnown RBP11.23□□□□□ -0.61
Pcdhb13-201ENSMUST00000056915 CenpbP27790 599 aa11.23□□□□□ -0.61
Pcdhb13-201ENSMUST00000056915 Myt1Q8CFC2 1127 aa11.2□□□□□ -0.62
Pcdhb13-201ENSMUST00000056915 Dnajc5bQ9CQ94 199 aa11.2□□□□□ -0.62
Pcdhb13-201ENSMUST00000056915 Ttbk1Q6PCN3 1308 aa11.2□□□□□ -0.62
Pcdhb13-201ENSMUST00000056915 Cngb1E1AZ71 1325 aa11.19□□□□□ -0.62
Pcdhb13-201ENSMUST00000056915 ScribQ80U72 1612 aa11.17□□□□□ -0.62
Pcdhb13-201ENSMUST00000056915 Rtl1Q7M732 1744 aa11.12□□□□□ -0.63
Pcdhb13-201ENSMUST00000056915 Zeb1Q64318 1117 aa11.1□□□□□ -0.63
Pcdhb13-201ENSMUST00000056915 HrcG5E8J6 738 aa11.04□□□□□ -0.64
Pcdhb13-201ENSMUST00000056915 Pcgf6Q99NA9 353 aa11.03□□□□□ -0.64
Pcdhb13-201ENSMUST00000056915 Esf1Q3V1V3 845 aaKnown RBP10.98□□□□□ -0.65
Pcdhb13-201ENSMUST00000056915 Zcchc6Q5BLK4 1491 aaKnown RBP10.94□□□□□ -0.66
Pcdhb13-201ENSMUST00000056915 Supt5hO55201 1082 aaKnown RBP10.92□□□□□ -0.66
Pcdhb13-201ENSMUST00000056915 Bcl11aQ9QYE3 773 aa10.91□□□□□ -0.66
Pcdhb13-201ENSMUST00000056915 Wdr66E9Q743 1299 aa10.84□□□□□ -0.67
Pcdhb13-201ENSMUST00000056915 Myt1lP97500 1187 aa10.84□□□□□ -0.67
Pcdhb13-201ENSMUST00000056915 Ppargc1bQ8VHJ7 1014 aa10.83□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 NacadQ5SWP3 1504 aa10.81□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 UbtfP25976 765 aaKnown RBP10.81□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 Chic1Q8CBW7 227 aa10.8□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 Dcaf1Q80TR8 1506 aa10.79□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 Kdm5dQ62240 1548 aa10.78□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 Rb1cc1Q9ESK9 1588 aa10.77□□□□□ -0.68
Pcdhb13-201ENSMUST00000056915 Plppr3Q7TPB0 716 aa10.7□□□□□ -0.7
Pcdhb13-201ENSMUST00000056915 Mier1Q5UAK0 511 aa10.69□□□□□ -0.7
Pcdhb13-201ENSMUST00000056915 Npm2Q80W85 207 aa10.67□□□□□ -0.7
Pcdhb13-201ENSMUST00000056915 PrkcshO08795 521 aa10.66□□□□□ -0.7
Pcdhb13-201ENSMUST00000056915 Ube2uB1AUC4 352 aa10.63□□□□□ -0.71
Pcdhb13-201ENSMUST00000056915 Sycp2Q9CUU3 1500 aa10.61□□□□□ -0.71
Pcdhb13-201ENSMUST00000056915 Neurod1Q60867 357 aa10.6□□□□□ -0.71
Pcdhb13-201ENSMUST00000056915 NefmP08553 848 aa10.59□□□□□ -0.71
Pcdhb13-201ENSMUST00000056915 Cep164Q5DU05 1446 aa10.56□□□□□ -0.72
Pcdhb13-201ENSMUST00000056915 Sall2Q9QX96 1004 aa10.56□□□□□ -0.72
Pcdhb13-201ENSMUST00000056915 Baz1aO88379 1555 aa10.53□□□□□ -0.72
Pcdhb13-201ENSMUST00000056915 Il27Q8K3I6 234 aa10.53□□□□□ -0.72
Pcdhb13-201ENSMUST00000056915 BicraF8VPZ9 1578 aa10.52□□□□□ -0.73
Pcdhb13-201ENSMUST00000056915 Ap3b1Q9Z1T1 1105 aa10.52□□□□□ -0.73
Pcdhb13-201ENSMUST00000056915 Rsf1E9PWW9 1441 aaKnown RBP10.49□□□□□ -0.73
Pcdhb13-201ENSMUST00000056915 Plekhg3Q4VAC9 1341 aa10.47□□□□□ -0.73
Pcdhb13-201ENSMUST00000056915 Gm38655A0A286YDK6 273 aa10.42□□□□□ -0.74
Pcdhb13-201ENSMUST00000056915 CatipB9EKE5 520 aa10.42□□□□□ -0.74
Pcdhb13-201ENSMUST00000056915 Ccdc88bQ4QRL3 1481 aa10.4□□□□□ -0.74
Pcdhb13-201ENSMUST00000056915 Dnajc5P60904 198 aa10.4□□□□□ -0.74
Pcdhb13-201ENSMUST00000056915 Aebp2Q9Z248 504 aaKnown RBP10.4□□□□□ -0.74
Pcdhb13-201ENSMUST00000056915 1700123L14RikQ3V2K7 440 aa10.39□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Eid3Q3V124 375 aa10.38□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Mapk8ip2Q9ERE9 830 aa10.38□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Pds5bQ4VA53 1446 aaKnown RBP10.38□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Cdk11bP24788 784 aaKnown RBP10.37□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Nop58Q6DFW4 536 aaKnown RBP10.37□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Brd4Q9ESU6 1400 aaKnown RBP10.37□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Csrnp3P59055 597 aa10.36□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 Pknox2Q8BG99 474 aa10.34□□□□□ -0.75
Pcdhb13-201ENSMUST00000056915 TonslQ6NZL6 1363 aa10.31□□□□□ -0.76
Pcdhb13-201ENSMUST00000056915 Cecr2E9Q2Z1 1453 aa10.3□□□□□ -0.76
Pcdhb13-201ENSMUST00000056915 Fam50aQ9WV03 339 aaKnown RBP10.29□□□□□ -0.76
Pcdhb13-201ENSMUST00000056915 Slc24a1Q91WD8 1130 aa10.29□□□□□ -0.76
Pcdhb13-201ENSMUST00000056915 Thoc2B1AZI6 1594 aaKnown RBP10.28□□□□□ -0.76
Pcdhb13-201ENSMUST00000056915 Golga3P55937 1487 aa10.28□□□□□ -0.76
Pcdhb13-201ENSMUST00000056915 Cc2d2aQ8CFW7 1633 aa10.26□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 Lmod2Q3UHZ5 550 aa10.25□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 Eif5bQ05D44 1216 aaKnown RBP10.23□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 ArxO35085 564 aa10.22□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 ClspnQ80YR7 1315 aa10.22□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 Smarca2Q6DIC0 1577 aa10.21□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 Gtf3c5Q8R2T8 520 aa10.21□□□□□ -0.77
Pcdhb13-201ENSMUST00000056915 Clip1Q922J3 1391 aa10.21□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 Pelp1Q9DBD5 1123 aaKnown RBP10.2□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 Ubl4bQ9CQ84 188 aa10.19□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 Ercc6F8VPZ5 1481 aa10.19□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 Atad2bE9Q166 1460 aaKnown RBP10.18□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 Anks4bQ8K3X6 423 aa10.17□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 NclP09405 707 aaKnown RBP10.17□□□□□ -0.78
Pcdhb13-201ENSMUST00000056915 BccipQ9CWI3 316 aa10.13□□□□□ -0.79
Pcdhb13-201ENSMUST00000056915 Synj1Q8CHC4 1574 aa10.11□□□□□ -0.79
Pcdhb13-201ENSMUST00000056915 Ifnlr1Q8CGK5 535 aa10.08□□□□□ -0.8
Pcdhb13-201ENSMUST00000056915 Aplp2Q06335 707 aa10.06□□□□□ -0.8
Pcdhb13-201ENSMUST00000056915 CftrP26361 1476 aa10.06□□□□□ -0.8
Pcdhb13-201ENSMUST00000056915 Q8BT18 775 aa10.06□□□□□ -0.8
Pcdhb13-201ENSMUST00000056915 Crybg2B7ZCC2 1516 aa10.03□□□□□ -0.8
Pcdhb13-201ENSMUST00000056915 Phldb1Q6PDH0 1371 aaKnown RBP10.02□□□□□ -0.8
Pcdhb13-201ENSMUST00000056915 Cep162Q6ZQ06 1403 aa10.01□□□□□ -0.81
Pcdhb13-201ENSMUST00000056915 SafbD3YXK2 937 aaKnown RBP10□□□□□ -0.81
Pcdhb13-201ENSMUST00000056915 Rapgef2Q8CHG7 1496 aa10□□□□□ -0.81
Pcdhb13-201ENSMUST00000056915 NrdcQ8BHG1 1161 aa10□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 69.7 ms