RNA–Protein interactions for RNA: ENSMUST00000056749.13

Nhlrc3-201, Transcript of NHL repeat-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nhlrc3, Length 5,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3-201ENSMUST00000056749 Rhox8Q6VSS7 320 aa20.49■□□□□ 0.87
Nhlrc3-201ENSMUST00000056749 NischQ80TM9 1593 aa19.54■□□□□ 0.72
Nhlrc3-201ENSMUST00000056749 Ccdc136Q3TVA9 1136 aa18.51■□□□□ 0.55
Nhlrc3-201ENSMUST00000056749 Abcc9P70170 1546 aa18.41■□□□□ 0.54
Nhlrc3-201ENSMUST00000056749 Esf1Q3V1V3 845 aaKnown RBP18.32■□□□□ 0.52
Nhlrc3-201ENSMUST00000056749 Abcc8B2RUS7 1588 aa18.14■□□□□ 0.49
Nhlrc3-201ENSMUST00000056749 Cngb1E1AZ71 1325 aa18.13■□□□□ 0.49
Nhlrc3-201ENSMUST00000056749 Trim41Q5NCC3 630 aa18.11■□□□□ 0.49
Nhlrc3-201ENSMUST00000056749 Zeb1Q64318 1117 aa17.94■□□□□ 0.46
Nhlrc3-201ENSMUST00000056749 Gm35339A0A140LHH9 1649 aa17.9■□□□□ 0.46
Nhlrc3-201ENSMUST00000056749 Gab3Q8BSM5 595 aa17.74■□□□□ 0.43
Nhlrc3-201ENSMUST00000056749 Ehmt2Q9Z148 1263 aaKnown RBP17.73■□□□□ 0.43
Nhlrc3-201ENSMUST00000056749 Npm2Q80W85 207 aa17.72■□□□□ 0.43
Nhlrc3-201ENSMUST00000056749 Zcchc6Q5BLK4 1491 aaKnown RBP17.7■□□□□ 0.42
Nhlrc3-201ENSMUST00000056749 Ube2uB1AUC4 352 aa17.63■□□□□ 0.41
Nhlrc3-201ENSMUST00000056749 Myt1lP97500 1187 aa17.46■□□□□ 0.39
Nhlrc3-201ENSMUST00000056749 Ccdc180J3QNE4 1664 aa17.34■□□□□ 0.37
Nhlrc3-201ENSMUST00000056749 Rpgrip1Q9EPQ2 1331 aa17.33■□□□□ 0.36
Nhlrc3-201ENSMUST00000056749 Rtl1Q7M732 1744 aa17.32■□□□□ 0.36
Nhlrc3-201ENSMUST00000056749 Il27Q8K3I6 234 aa17.32■□□□□ 0.36
Nhlrc3-201ENSMUST00000056749 HrcG5E8J6 738 aa17.23■□□□□ 0.35
Nhlrc3-201ENSMUST00000056749 Rb1cc1Q9ESK9 1588 aa17.13■□□□□ 0.33
Nhlrc3-201ENSMUST00000056749 Las1lA2BE28 776 aaKnown RBP17.13■□□□□ 0.33
Nhlrc3-201ENSMUST00000056749 NacadQ5SWP3 1504 aa17.12■□□□□ 0.33
Nhlrc3-201ENSMUST00000056749 Wdr66E9Q743 1299 aa17.01■□□□□ 0.31
Nhlrc3-201ENSMUST00000056749 UbtfP25976 765 aaKnown RBP16.89■□□□□ 0.29
Nhlrc3-201ENSMUST00000056749 Brd4Q9ESU6 1400 aaKnown RBP16.88■□□□□ 0.29
Nhlrc3-201ENSMUST00000056749 Npm1Q61937 292 aaKnown RBP16.84■□□□□ 0.29
Nhlrc3-201ENSMUST00000056749 Kdm5dQ62240 1548 aa16.84■□□□□ 0.29
Nhlrc3-201ENSMUST00000056749 Baz1aO88379 1555 aa16.78■□□□□ 0.28
Nhlrc3-201ENSMUST00000056749 Dcaf1Q80TR8 1506 aa16.73■□□□□ 0.27
Nhlrc3-201ENSMUST00000056749 Ap3b1Q9Z1T1 1105 aa16.73■□□□□ 0.27
Nhlrc3-201ENSMUST00000056749 Ubl4bQ9CQ84 188 aa16.63■□□□□ 0.25
Nhlrc3-201ENSMUST00000056749 Acin1Q9JIX8 1338 aaKnown RBP16.63■□□□□ 0.25
Nhlrc3-201ENSMUST00000056749 Chic1Q8CBW7 227 aa16.55■□□□□ 0.24
Nhlrc3-201ENSMUST00000056749 NefmP08553 848 aa16.55■□□□□ 0.24
Nhlrc3-201ENSMUST00000056749 Fam50aQ9WV03 339 aaKnown RBP16.49■□□□□ 0.23
Nhlrc3-201ENSMUST00000056749 ScribQ80U72 1612 aa16.48■□□□□ 0.23
Nhlrc3-201ENSMUST00000056749 Sycp2Q9CUU3 1500 aa16.44■□□□□ 0.22
Nhlrc3-201ENSMUST00000056749 Os9Q8K2C7 672 aa16.42■□□□□ 0.22
Nhlrc3-201ENSMUST00000056749 Ifnlr1Q8CGK5 535 aa16.4■□□□□ 0.22
Nhlrc3-201ENSMUST00000056749 Cep164Q5DU05 1446 aa16.39■□□□□ 0.21
Nhlrc3-201ENSMUST00000056749 Ercc6F8VPZ5 1481 aa16.36■□□□□ 0.21
Nhlrc3-201ENSMUST00000056749 Lmod2Q3UHZ5 550 aa16.36■□□□□ 0.21
Nhlrc3-201ENSMUST00000056749 Gm13697A2AK42 830 aa16.32■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Plekhg3Q4VAC9 1341 aa16.32■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Slc24a1Q91WD8 1130 aa16.31■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Golga3P55937 1487 aa16.3■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Kif15Q6P9L6 1387 aa16.29■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Pds5bQ4VA53 1446 aaKnown RBP16.28■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Neurod1Q60867 357 aa16.28■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Rsf1E9PWW9 1441 aaKnown RBP16.28■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Pelp1Q9DBD5 1123 aaKnown RBP16.28■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 NclP09405 707 aaKnown RBP16.27■□□□□ 0.2
Nhlrc3-201ENSMUST00000056749 Ttbk1Q6PCN3 1308 aa16.26■□□□□ 0.19
Nhlrc3-201ENSMUST00000056749 Anp32bQ9EST5 272 aaKnown RBP16.23■□□□□ 0.19
Nhlrc3-201ENSMUST00000056749 Crybg2B7ZCC2 1516 aa16.21■□□□□ 0.19
Nhlrc3-201ENSMUST00000056749 Zbtb7cQ8VCZ7 619 aa16.2■□□□□ 0.18
Nhlrc3-201ENSMUST00000056749 Hnrnpul2Q00PI9 745 aaKnown RBP16.19■□□□□ 0.18
Nhlrc3-201ENSMUST00000056749 Stra8P70278 393 aa16.19■□□□□ 0.18
Nhlrc3-201ENSMUST00000056749 Clip1Q922J3 1391 aa16.18■□□□□ 0.18
Nhlrc3-201ENSMUST00000056749 Mier1Q5UAK0 511 aa16.16■□□□□ 0.18
Nhlrc3-201ENSMUST00000056749 Fkbp15Q6P9Q6 1216 aaKnown RBP16.16■□□□□ 0.18
Nhlrc3-201ENSMUST00000056749 Plppr3Q7TPB0 716 aa16.14■□□□□ 0.17
Nhlrc3-201ENSMUST00000056749 Ccdc18Q640L5 1455 aa16.08■□□□□ 0.16
Nhlrc3-201ENSMUST00000056749 Cecr2E9Q2Z1 1453 aa16.07■□□□□ 0.16
Nhlrc3-201ENSMUST00000056749 NrdcQ8BHG1 1161 aa16.01■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 TonslQ6NZL6 1363 aa16■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 Smarca2Q6DIC0 1577 aa16■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 Gm13695A2AK44 830 aa15.99■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 CftrP26361 1476 aa15.98■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 Atad2bE9Q166 1460 aaKnown RBP15.97■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 Atp1b4Q99ME6 356 aa15.97■□□□□ 0.15
Nhlrc3-201ENSMUST00000056749 Erich6D3Z6S9 713 aa15.94■□□□□ 0.14
Nhlrc3-201ENSMUST00000056749 Setd5Q5XJV7 1441 aa15.92■□□□□ 0.14
Nhlrc3-201ENSMUST00000056749 Ppargc1bQ8VHJ7 1014 aa15.89■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 BlmO88700 1416 aa15.88■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Ccdc88bQ4QRL3 1481 aa15.88■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Smarca4Q3TKT4 1613 aaKnown RBP15.87■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Hdac5Q9Z2V6 1113 aa15.86■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Fmn1Q05860 1466 aa15.85■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Phldb1Q6PDH0 1371 aaKnown RBP15.85■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Synj1Q8CHC4 1574 aa15.84■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Safb2Q80YR5 991 aaKnown RBP15.84■□□□□ 0.13
Nhlrc3-201ENSMUST00000056749 Eid3Q3V124 375 aa15.83■□□□□ 0.12
Nhlrc3-201ENSMUST00000056749 Arhgap27A2AB59 869 aa15.79■□□□□ 0.12
Nhlrc3-201ENSMUST00000056749 Cux2P70298 1426 aa15.78■□□□□ 0.12
Nhlrc3-201ENSMUST00000056749 Chic2Q9D9G3 165 aa15.77■□□□□ 0.12
Nhlrc3-201ENSMUST00000056749 Pcgf6Q99NA9 353 aa15.76■□□□□ 0.11
Nhlrc3-201ENSMUST00000056749 Eea1Q8BL66 1411 aa15.76■□□□□ 0.11
Nhlrc3-201ENSMUST00000056749 Cdk11bP24788 784 aaKnown RBP15.71■□□□□ 0.11
Nhlrc3-201ENSMUST00000056749 NeflP08551 543 aa15.71■□□□□ 0.11
Nhlrc3-201ENSMUST00000056749 Iqgap2Q3UQ44 1575 aa15.71■□□□□ 0.1
Nhlrc3-201ENSMUST00000056749 Zbtb4Q5F293 982 aa15.7■□□□□ 0.1
Nhlrc3-201ENSMUST00000056749 Cttnbp2B9EJA2 1648 aa15.69■□□□□ 0.1
Nhlrc3-201ENSMUST00000056749 Ccer2J3QPU5 274 aa15.69■□□□□ 0.1
Nhlrc3-201ENSMUST00000056749 Supt5hO55201 1082 aaKnown RBP15.69■□□□□ 0.1
Nhlrc3-201ENSMUST00000056749 Nop58Q6DFW4 536 aaKnown RBP15.64■□□□□ 0.09
Nhlrc3-201ENSMUST00000056749 Cep162Q6ZQ06 1403 aa15.63■□□□□ 0.09
Nhlrc3-201ENSMUST00000056749 Clstn2Q9ER65 966 aa15.6■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms