RNA–Protein interactions for RNA: ENSMUST00000047145.13

Trim41-201, Transcript of E3 ubiquitin-protein ligase TRIM41, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim41, Length 3,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41-201ENSMUST00000047145 Rhox8Q6VSS7 320 aa26.24■■□□□ 1.79
Trim41-201ENSMUST00000047145 NischQ80TM9 1593 aa26.24■■□□□ 1.79
Trim41-201ENSMUST00000047145 Rpgrip1Q9EPQ2 1331 aa26.09■■□□□ 1.77
Trim41-201ENSMUST00000047145 Pcgf6Q99NA9 353 aa25.46■■□□□ 1.67
Trim41-201ENSMUST00000047145 Ehmt2Q9Z148 1263 aaKnown RBP25.3■■□□□ 1.64
Trim41-201ENSMUST00000047145 Abcc9P70170 1546 aa25.16■■□□□ 1.62
Trim41-201ENSMUST00000047145 Acin1Q9JIX8 1338 aaKnown RBP25.16■■□□□ 1.62
Trim41-201ENSMUST00000047145 Neurod1Q60867 357 aa24.74■■□□□ 1.55
Trim41-201ENSMUST00000047145 Las1lA2BE28 776 aaKnown RBP24.66■■□□□ 1.54
Trim41-201ENSMUST00000047145 Gm35339A0A140LHH9 1649 aa24.65■■□□□ 1.54
Trim41-201ENSMUST00000047145 Supt5hO55201 1082 aaKnown RBP24.62■■□□□ 1.53
Trim41-201ENSMUST00000047145 Abcc8B2RUS7 1588 aa24.58■■□□□ 1.53
Trim41-201ENSMUST00000047145 DiexfQ8BTT6 772 aaKnown RBP24.55■■□□□ 1.52
Trim41-201ENSMUST00000047145 CenpbP27790 599 aa24.44■■□□□ 1.5
Trim41-201ENSMUST00000047145 1700123L14RikQ3V2K7 440 aa24.33■■□□□ 1.49
Trim41-201ENSMUST00000047145 Ccdc136Q3TVA9 1136 aa24.2■■□□□ 1.46
Trim41-201ENSMUST00000047145 Csrnp3P59055 597 aa24.1■■□□□ 1.45
Trim41-201ENSMUST00000047145 Ccdc180J3QNE4 1664 aa24.09■■□□□ 1.45
Trim41-201ENSMUST00000047145 Rtl1Q7M732 1744 aa24.09■■□□□ 1.45
Trim41-201ENSMUST00000047145 Myt1Q8CFC2 1127 aa24.06■■□□□ 1.44
Trim41-201ENSMUST00000047145 Bcl11aQ9QYE3 773 aa23.97■■□□□ 1.43
Trim41-201ENSMUST00000047145 Zeb1Q64318 1117 aa23.93■■□□□ 1.42
Trim41-201ENSMUST00000047145 Trim41Q5NCC3 630 aa23.88■■□□□ 1.41
Trim41-201ENSMUST00000047145 Gm38655A0A286YDK6 273 aa23.8■■□□□ 1.4
Trim41-201ENSMUST00000047145 Cngb1E1AZ71 1325 aa23.63■■□□□ 1.37
Trim41-201ENSMUST00000047145 PrkcshO08795 521 aa23.61■■□□□ 1.37
Trim41-201ENSMUST00000047145 Anks4bQ8K3X6 423 aa23.55■■□□□ 1.36
Trim41-201ENSMUST00000047145 Amer1Q7TS75 1132 aa23.41■■□□□ 1.34
Trim41-201ENSMUST00000047145 Aplp2Q06335 707 aa23.38■■□□□ 1.33
Trim41-201ENSMUST00000047145 Sall2Q9QX96 1004 aa23.37■■□□□ 1.33
Trim41-201ENSMUST00000047145 Zcchc6Q5BLK4 1491 aaKnown RBP23.34■■□□□ 1.33
Trim41-201ENSMUST00000047145 HrcG5E8J6 738 aa23.33■■□□□ 1.33
Trim41-201ENSMUST00000047145 Ifnlr1Q8CGK5 535 aa23.23■■□□□ 1.31
Trim41-201ENSMUST00000047145 Gab3Q8BSM5 595 aa23.22■■□□□ 1.31
Trim41-201ENSMUST00000047145 Dcaf1Q80TR8 1506 aa23.17■■□□□ 1.3
Trim41-201ENSMUST00000047145 Wdr66E9Q743 1299 aa23.1■■□□□ 1.29
Trim41-201ENSMUST00000047145 Ppargc1bQ8VHJ7 1014 aa23.07■■□□□ 1.28
Trim41-201ENSMUST00000047145 Cdk11bP24788 784 aaKnown RBP23.06■■□□□ 1.28
Trim41-201ENSMUST00000047145 Fam71e1A1L3C1 212 aa23.05■■□□□ 1.28
Trim41-201ENSMUST00000047145 Rb1cc1Q9ESK9 1588 aa23.04■■□□□ 1.28
Trim41-201ENSMUST00000047145 Nop58Q6DFW4 536 aaKnown RBP22.95■■□□□ 1.26
Trim41-201ENSMUST00000047145 Mapk8ip2Q9ERE9 830 aa22.94■■□□□ 1.26
Trim41-201ENSMUST00000047145 NefmP08553 848 aa22.73■■□□□ 1.23
Trim41-201ENSMUST00000047145 Ttbk1Q6PCN3 1308 aa22.69■■□□□ 1.22
Trim41-201ENSMUST00000047145 Esf1Q3V1V3 845 aaKnown RBP22.68■■□□□ 1.22
Trim41-201ENSMUST00000047145 ScribQ80U72 1612 aa22.67■■□□□ 1.22
Trim41-201ENSMUST00000047145 SafbD3YXK2 937 aaKnown RBP22.66■■□□□ 1.22
Trim41-201ENSMUST00000047145 Chic1Q8CBW7 227 aa22.61■■□□□ 1.21
Trim41-201ENSMUST00000047145 Baz1aO88379 1555 aa22.6■■□□□ 1.21
Trim41-201ENSMUST00000047145 Kdm5dQ62240 1548 aa22.57■■□□□ 1.2
Trim41-201ENSMUST00000047145 Aebp2Q9Z248 504 aaKnown RBP22.56■■□□□ 1.2
Trim41-201ENSMUST00000047145 Mier1Q5UAK0 511 aa22.54■■□□□ 1.2
Trim41-201ENSMUST00000047145 Cep164Q5DU05 1446 aa22.44■■□□□ 1.18
Trim41-201ENSMUST00000047145 UbtfP25976 765 aaKnown RBP22.36■■□□□ 1.17
Trim41-201ENSMUST00000047145 Hnrnpul2Q00PI9 745 aaKnown RBP22.35■■□□□ 1.17
Trim41-201ENSMUST00000047145 Hdac5Q9Z2V6 1113 aa22.34■■□□□ 1.17
Trim41-201ENSMUST00000047145 Myt1lP97500 1187 aa22.33■■□□□ 1.17
Trim41-201ENSMUST00000047145 NacadQ5SWP3 1504 aa22.31■■□□□ 1.16
Trim41-201ENSMUST00000047145 ClspnQ80YR7 1315 aa22.25■■□□□ 1.15
Trim41-201ENSMUST00000047145 Rsf1E9PWW9 1441 aaKnown RBP22.21■■□□□ 1.15
Trim41-201ENSMUST00000047145 Ap3b1Q9Z1T1 1105 aa22.16■■□□□ 1.14
Trim41-201ENSMUST00000047145 Pknox2Q8BG99 474 aa22.14■■□□□ 1.14
Trim41-201ENSMUST00000047145 Pelp1Q9DBD5 1123 aaKnown RBP22.12■■□□□ 1.13
Trim41-201ENSMUST00000047145 Anp32aO35381 247 aa22.11■■□□□ 1.13
Trim41-201ENSMUST00000047145 Npm2Q80W85 207 aa22.05■■□□□ 1.12
Trim41-201ENSMUST00000047145 Ccdc88bQ4QRL3 1481 aa22.02■■□□□ 1.12
Trim41-201ENSMUST00000047145 Tnnt3Q9QZ47 272 aa22.01■■□□□ 1.11
Trim41-201ENSMUST00000047145 Brd4Q9ESU6 1400 aaKnown RBP21.99■■□□□ 1.11
Trim41-201ENSMUST00000047145 Smarca2Q6DIC0 1577 aa21.98■■□□□ 1.11
Trim41-201ENSMUST00000047145 Il27Q8K3I6 234 aa21.96■■□□□ 1.11
Trim41-201ENSMUST00000047145 Rtl5Q5DTT4 599 aa21.96■■□□□ 1.11
Trim41-201ENSMUST00000047145 Plcd4Q8K3R3 807 aa21.96■■□□□ 1.11
Trim41-201ENSMUST00000047145 Fgd1P52734 960 aa21.93■■□□□ 1.1
Trim41-201ENSMUST00000047145 Cecr2E9Q2Z1 1453 aa21.88■■□□□ 1.09
Trim41-201ENSMUST00000047145 Nolc1E9Q5C9 702 aaKnown RBP21.84■■□□□ 1.09
Trim41-201ENSMUST00000047145 Golga3P55937 1487 aa21.83■■□□□ 1.09
Trim41-201ENSMUST00000047145 Gtf3c3Q3TMP1 882 aa21.83■■□□□ 1.08
Trim41-201ENSMUST00000047145 NrdcQ8BHG1 1161 aa21.78■■□□□ 1.08
Trim41-201ENSMUST00000047145 Plekhg3Q4VAC9 1341 aa21.75■■□□□ 1.07
Trim41-201ENSMUST00000047145 Sycp2Q9CUU3 1500 aa21.75■■□□□ 1.07
Trim41-201ENSMUST00000047145 Crybg2B7ZCC2 1516 aa21.69■■□□□ 1.06
Trim41-201ENSMUST00000047145 Supt16hQ920B9 1047 aa21.66■■□□□ 1.06
Trim41-201ENSMUST00000047145 TonslQ6NZL6 1363 aa21.66■■□□□ 1.06
Trim41-201ENSMUST00000047145 Upf2A2AT37 1269 aaKnown RBP21.65■■□□□ 1.06
Trim41-201ENSMUST00000047145 Synj1Q8CHC4 1574 aa21.6■■□□□ 1.05
Trim41-201ENSMUST00000047145 Irx3P81067 507 aa21.6■■□□□ 1.05
Trim41-201ENSMUST00000047145 Calr4Q3TQS0 420 aa21.56■■□□□ 1.04
Trim41-201ENSMUST00000047145 4933416C03RikQ3V063 378 aa21.53■■□□□ 1.04
Trim41-201ENSMUST00000047145 Ppp4r2Q0VGB7 417 aa21.52■■□□□ 1.04
Trim41-201ENSMUST00000047145 Slc24a1Q91WD8 1130 aa21.51■■□□□ 1.03
Trim41-201ENSMUST00000047145 Eid3Q3V124 375 aa21.48■■□□□ 1.03
Trim41-201ENSMUST00000047145 CftrP26361 1476 aa21.44■■□□□ 1.02
Trim41-201ENSMUST00000047145 Ccdc27Q3V036 639 aa21.42■■□□□ 1.02
Trim41-201ENSMUST00000047145 Clip1Q922J3 1391 aa21.39■■□□□ 1.01
Trim41-201ENSMUST00000047145 Taok2Q6ZQ29 1240 aa21.39■■□□□ 1.01
Trim41-201ENSMUST00000047145 Rtn4Q99P72 1162 aaKnown RBP21.35■■□□□ 1.01
Trim41-201ENSMUST00000047145 Pak3Q61036 559 aa21.33■■□□□ 1
Trim41-201ENSMUST00000047145 Eif5bQ05D44 1216 aaKnown RBP21.32■■□□□ 1
Trim41-201ENSMUST00000047145 Zfp777B9EKF4 885 aa21.3■■□□□ 1
Trim41-201ENSMUST00000047145 DaxxO35613 739 aa21.29■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms