RNA–Protein interactions for RNA: ENSMUST00000047099.11

Pif1-201, Transcript of ATP-dependent DNA helicase PIF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pif1, Length 3,685 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1-201ENSMUST00000047099 NischQ80TM9 1593 aa19■□□□□ 0.63
Pif1-201ENSMUST00000047099 Rhox8Q6VSS7 320 aa18.65■□□□□ 0.58
Pif1-201ENSMUST00000047099 Abcc9P70170 1546 aa18.09■□□□□ 0.49
Pif1-201ENSMUST00000047099 Gm35339A0A140LHH9 1649 aa18■□□□□ 0.47
Pif1-201ENSMUST00000047099 Abcc8B2RUS7 1588 aa17.92■□□□□ 0.46
Pif1-201ENSMUST00000047099 Rpgrip1Q9EPQ2 1331 aa17.37■□□□□ 0.37
Pif1-201ENSMUST00000047099 Ehmt2Q9Z148 1263 aaKnown RBP17.27■□□□□ 0.35
Pif1-201ENSMUST00000047099 Rtl1Q7M732 1744 aa17.17■□□□□ 0.34
Pif1-201ENSMUST00000047099 Ccdc136Q3TVA9 1136 aa17.17■□□□□ 0.34
Pif1-201ENSMUST00000047099 Ccdc180J3QNE4 1664 aa17.17■□□□□ 0.34
Pif1-201ENSMUST00000047099 Acin1Q9JIX8 1338 aaKnown RBP17.03■□□□□ 0.32
Pif1-201ENSMUST00000047099 ScribQ80U72 1612 aa16.8■□□□□ 0.28
Pif1-201ENSMUST00000047099 Zcchc6Q5BLK4 1491 aaKnown RBP16.79■□□□□ 0.28
Pif1-201ENSMUST00000047099 Pcgf6Q99NA9 353 aa16.72■□□□□ 0.27
Pif1-201ENSMUST00000047099 NacadQ5SWP3 1504 aa16.69■□□□□ 0.26
Pif1-201ENSMUST00000047099 Kdm5dQ62240 1548 aa16.69■□□□□ 0.26
Pif1-201ENSMUST00000047099 Esf1Q3V1V3 845 aaKnown RBP16.68■□□□□ 0.26
Pif1-201ENSMUST00000047099 Rb1cc1Q9ESK9 1588 aa16.63■□□□□ 0.25
Pif1-201ENSMUST00000047099 Cngb1E1AZ71 1325 aa16.59■□□□□ 0.25
Pif1-201ENSMUST00000047099 HrcG5E8J6 738 aa16.54■□□□□ 0.24
Pif1-201ENSMUST00000047099 Trim41Q5NCC3 630 aa16.51■□□□□ 0.23
Pif1-201ENSMUST00000047099 Dcaf1Q80TR8 1506 aa16.39■□□□□ 0.21
Pif1-201ENSMUST00000047099 Supt5hO55201 1082 aaKnown RBP16.39■□□□□ 0.21
Pif1-201ENSMUST00000047099 Baz1aO88379 1555 aa16.27■□□□□ 0.2
Pif1-201ENSMUST00000047099 Sycp2Q9CUU3 1500 aa16.23■□□□□ 0.19
Pif1-201ENSMUST00000047099 Zeb1Q64318 1117 aa16.21■□□□□ 0.19
Pif1-201ENSMUST00000047099 Gab3Q8BSM5 595 aa16.2■□□□□ 0.18
Pif1-201ENSMUST00000047099 Neurod1Q60867 357 aa16.12■□□□□ 0.17
Pif1-201ENSMUST00000047099 Il27Q8K3I6 234 aa16.1■□□□□ 0.17
Pif1-201ENSMUST00000047099 Npm2Q80W85 207 aa15.9■□□□□ 0.14
Pif1-201ENSMUST00000047099 Brd4Q9ESU6 1400 aaKnown RBP15.88■□□□□ 0.13
Pif1-201ENSMUST00000047099 Cep164Q5DU05 1446 aa15.86■□□□□ 0.13
Pif1-201ENSMUST00000047099 Myt1lP97500 1187 aa15.85■□□□□ 0.13
Pif1-201ENSMUST00000047099 Cecr2E9Q2Z1 1453 aa15.84■□□□□ 0.13
Pif1-201ENSMUST00000047099 Las1lA2BE28 776 aaKnown RBP15.84■□□□□ 0.13
Pif1-201ENSMUST00000047099 Mier1Q5UAK0 511 aa15.82■□□□□ 0.12
Pif1-201ENSMUST00000047099 Sall2Q9QX96 1004 aa15.82■□□□□ 0.12
Pif1-201ENSMUST00000047099 NefmP08553 848 aa15.81■□□□□ 0.12
Pif1-201ENSMUST00000047099 Chic1Q8CBW7 227 aa15.79■□□□□ 0.12
Pif1-201ENSMUST00000047099 Ubl4bQ9CQ84 188 aa15.76■□□□□ 0.11
Pif1-201ENSMUST00000047099 BicraF8VPZ9 1578 aa15.76■□□□□ 0.11
Pif1-201ENSMUST00000047099 Crybg2B7ZCC2 1516 aa15.75■□□□□ 0.11
Pif1-201ENSMUST00000047099 Wdr66E9Q743 1299 aa15.74■□□□□ 0.11
Pif1-201ENSMUST00000047099 Pds5bQ4VA53 1446 aaKnown RBP15.71■□□□□ 0.11
Pif1-201ENSMUST00000047099 Smarca2Q6DIC0 1577 aa15.68■□□□□ 0.1
Pif1-201ENSMUST00000047099 Ppargc1bQ8VHJ7 1014 aa15.66■□□□□ 0.1
Pif1-201ENSMUST00000047099 Csrnp3P59055 597 aa15.65■□□□□ 0.1
Pif1-201ENSMUST00000047099 Npm1Q61937 292 aaKnown RBP15.65■□□□□ 0.1
Pif1-201ENSMUST00000047099 Ercc6F8VPZ5 1481 aa15.63■□□□□ 0.09
Pif1-201ENSMUST00000047099 UbtfP25976 765 aaKnown RBP15.62■□□□□ 0.09
Pif1-201ENSMUST00000047099 1700123L14RikQ3V2K7 440 aa15.61■□□□□ 0.09
Pif1-201ENSMUST00000047099 Rsf1E9PWW9 1441 aaKnown RBP15.6■□□□□ 0.09
Pif1-201ENSMUST00000047099 Anks4bQ8K3X6 423 aa15.55■□□□□ 0.08
Pif1-201ENSMUST00000047099 Atad2bE9Q166 1460 aaKnown RBP15.55■□□□□ 0.08
Pif1-201ENSMUST00000047099 Smarca4Q3TKT4 1613 aaKnown RBP15.51■□□□□ 0.07
Pif1-201ENSMUST00000047099 Aebp2Q9Z248 504 aaKnown RBP15.5■□□□□ 0.07
Pif1-201ENSMUST00000047099 CftrP26361 1476 aa15.5■□□□□ 0.07
Pif1-201ENSMUST00000047099 Synj1Q8CHC4 1574 aa15.49■□□□□ 0.07
Pif1-201ENSMUST00000047099 Kif15Q6P9L6 1387 aa15.48■□□□□ 0.07
Pif1-201ENSMUST00000047099 Cdk11bP24788 784 aaKnown RBP15.47■□□□□ 0.07
Pif1-201ENSMUST00000047099 Dnajc5bQ9CQ94 199 aa15.46■□□□□ 0.06
Pif1-201ENSMUST00000047099 Nop58Q6DFW4 536 aaKnown RBP15.45■□□□□ 0.06
Pif1-201ENSMUST00000047099 Golga3P55937 1487 aa15.44■□□□□ 0.06
Pif1-201ENSMUST00000047099 Gm38655A0A286YDK6 273 aa15.44■□□□□ 0.06
Pif1-201ENSMUST00000047099 Ccdc88bQ4QRL3 1481 aa15.43■□□□□ 0.06
Pif1-201ENSMUST00000047099 Iqgap2Q3UQ44 1575 aa15.42■□□□□ 0.06
Pif1-201ENSMUST00000047099 Ap3b1Q9Z1T1 1105 aa15.39■□□□□ 0.05
Pif1-201ENSMUST00000047099 ClspnQ80YR7 1315 aa15.31■□□□□ 0.04
Pif1-201ENSMUST00000047099 CenpbP27790 599 aa15.31■□□□□ 0.04
Pif1-201ENSMUST00000047099 DiexfQ8BTT6 772 aaKnown RBP15.31■□□□□ 0.04
Pif1-201ENSMUST00000047099 Cttnbp2B9EJA2 1648 aa15.27■□□□□ 0.03
Pif1-201ENSMUST00000047099 Phldb1Q6PDH0 1371 aaKnown RBP15.27■□□□□ 0.03
Pif1-201ENSMUST00000047099 Aplp2Q06335 707 aa15.23■□□□□ 0.03
Pif1-201ENSMUST00000047099 TonslQ6NZL6 1363 aa15.22■□□□□ 0.03
Pif1-201ENSMUST00000047099 Frmpd1A2AKB4 1549 aa15.18■□□□□ 0.02
Pif1-201ENSMUST00000047099 Cux2P70298 1426 aa15.17■□□□□ 0.02
Pif1-201ENSMUST00000047099 Plekhg3Q4VAC9 1341 aa15.13■□□□□ 0.01
Pif1-201ENSMUST00000047099 Ccdc18Q640L5 1455 aa15.12■□□□□ 0.01
Pif1-201ENSMUST00000047099 Ube2uB1AUC4 352 aa15.08■□□□□ 0.01
Pif1-201ENSMUST00000047099 Lmod2Q3UHZ5 550 aa15.08■□□□□ 0
Pif1-201ENSMUST00000047099 Cc2d2aQ8CFW7 1633 aa15.07■□□□□ 0
Pif1-201ENSMUST00000047099 Ifnlr1Q8CGK5 535 aa15.06■□□□□ 0
Pif1-201ENSMUST00000047099 Fmn1Q05860 1466 aa15.05■□□□□ 0
Pif1-201ENSMUST00000047099 Myt1Q8CFC2 1127 aa15.05■□□□□ -0
Pif1-201ENSMUST00000047099 Fkbp15Q6P9Q6 1216 aaKnown RBP15.04■□□□□ -0
Pif1-201ENSMUST00000047099 Wdr62Q3U3T8 1523 aa15.04■□□□□ -0
Pif1-201ENSMUST00000047099 Eid3Q3V124 375 aa15.04■□□□□ -0
Pif1-201ENSMUST00000047099 Mapk8ip2Q9ERE9 830 aa15.01□□□□□ -0.01
Pif1-201ENSMUST00000047099 Pelp1Q9DBD5 1123 aaKnown RBP15.01□□□□□ -0.01
Pif1-201ENSMUST00000047099 SafbD3YXK2 937 aaKnown RBP14.98□□□□□ -0.01
Pif1-201ENSMUST00000047099 Hnrnpul2Q00PI9 745 aaKnown RBP14.95□□□□□ -0.02
Pif1-201ENSMUST00000047099 Clip1Q922J3 1391 aa14.93□□□□□ -0.02
Pif1-201ENSMUST00000047099 Fam71e1A1L3C1 212 aa14.92□□□□□ -0.02
Pif1-201ENSMUST00000047099 Bcl11aQ9QYE3 773 aa14.88□□□□□ -0.03
Pif1-201ENSMUST00000047099 Dhx29Q6PGC1 1365 aaKnown RBP14.88□□□□□ -0.03
Pif1-201ENSMUST00000047099 Fam50aQ9WV03 339 aaKnown RBP14.88□□□□□ -0.03
Pif1-201ENSMUST00000047099 Cep162Q6ZQ06 1403 aa14.88□□□□□ -0.03
Pif1-201ENSMUST00000047099 LrpprcQ6PB66 1392 aaKnown RBP14.87□□□□□ -0.03
Pif1-201ENSMUST00000047099 Rapgef2Q8CHG7 1496 aa14.87□□□□□ -0.03
Pif1-201ENSMUST00000047099 Tnnt3Q9QZ47 272 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms