RNA–Protein interactions for RNA: ENSMUST00000043503.9

Scube3-201, Transcript of Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scube3, Length 6,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3-201ENSMUST00000043503 Rhox8Q6VSS7 320 aa28.02■■■□□ 2.08
Scube3-201ENSMUST00000043503 Ehmt2Q9Z148 1263 aaKnown RBP25.23■■□□□ 1.63
Scube3-201ENSMUST00000043503 Esf1Q3V1V3 845 aaKnown RBP24.9■■□□□ 1.58
Scube3-201ENSMUST00000043503 Ccdc136Q3TVA9 1136 aa24.89■■□□□ 1.57
Scube3-201ENSMUST00000043503 Cngb1E1AZ71 1325 aa24.88■■□□□ 1.57
Scube3-201ENSMUST00000043503 Rpgrip1Q9EPQ2 1331 aa24.6■■□□□ 1.53
Scube3-201ENSMUST00000043503 Ube2uB1AUC4 352 aa24.59■■□□□ 1.53
Scube3-201ENSMUST00000043503 Zeb1Q64318 1117 aa24.52■■□□□ 1.52
Scube3-201ENSMUST00000043503 Wdr66E9Q743 1299 aa24.45■■□□□ 1.51
Scube3-201ENSMUST00000043503 Gab3Q8BSM5 595 aa24.45■■□□□ 1.51
Scube3-201ENSMUST00000043503 Npm2Q80W85 207 aa24.34■■□□□ 1.49
Scube3-201ENSMUST00000043503 Las1lA2BE28 776 aaKnown RBP24.3■■□□□ 1.48
Scube3-201ENSMUST00000043503 Myt1lP97500 1187 aa24.15■■□□□ 1.46
Scube3-201ENSMUST00000043503 Trim41Q5NCC3 630 aa24.06■■□□□ 1.44
Scube3-201ENSMUST00000043503 NischQ80TM9 1593 aa24.02■■□□□ 1.44
Scube3-201ENSMUST00000043503 Pelp1Q9DBD5 1123 aaKnown RBP23.61■■□□□ 1.37
Scube3-201ENSMUST00000043503 UbtfP25976 765 aaKnown RBP23.48■■□□□ 1.35
Scube3-201ENSMUST00000043503 Il27Q8K3I6 234 aa23.41■■□□□ 1.34
Scube3-201ENSMUST00000043503 Slc24a1Q91WD8 1130 aa23.28■■□□□ 1.32
Scube3-201ENSMUST00000043503 Ap3b1Q9Z1T1 1105 aa23.08■■□□□ 1.28
Scube3-201ENSMUST00000043503 Abcc9P70170 1546 aa22.97■■□□□ 1.27
Scube3-201ENSMUST00000043503 Gm35339A0A140LHH9 1649 aa22.95■■□□□ 1.26
Scube3-201ENSMUST00000043503 NefmP08553 848 aa22.94■■□□□ 1.26
Scube3-201ENSMUST00000043503 Acin1Q9JIX8 1338 aaKnown RBP22.93■■□□□ 1.26
Scube3-201ENSMUST00000043503 Amer1Q7TS75 1132 aa22.87■■□□□ 1.25
Scube3-201ENSMUST00000043503 Neurod1Q60867 357 aa22.86■■□□□ 1.25
Scube3-201ENSMUST00000043503 Ccdc180J3QNE4 1664 aa22.84■■□□□ 1.25
Scube3-201ENSMUST00000043503 Zcchc6Q5BLK4 1491 aaKnown RBP22.84■■□□□ 1.25
Scube3-201ENSMUST00000043503 Fam50aQ9WV03 339 aaKnown RBP22.83■■□□□ 1.25
Scube3-201ENSMUST00000043503 Stra8P70278 393 aa22.83■■□□□ 1.24
Scube3-201ENSMUST00000043503 Os9Q8K2C7 672 aa22.76■■□□□ 1.23
Scube3-201ENSMUST00000043503 CenpbP27790 599 aa22.73■■□□□ 1.23
Scube3-201ENSMUST00000043503 Rtl1Q7M732 1744 aa22.62■■□□□ 1.21
Scube3-201ENSMUST00000043503 NclP09405 707 aaKnown RBP22.56■■□□□ 1.2
Scube3-201ENSMUST00000043503 Ppargc1bQ8VHJ7 1014 aa22.53■■□□□ 1.2
Scube3-201ENSMUST00000043503 NrdcQ8BHG1 1161 aa22.5■■□□□ 1.19
Scube3-201ENSMUST00000043503 Eif5bQ05D44 1216 aaKnown RBP22.48■■□□□ 1.19
Scube3-201ENSMUST00000043503 HrcG5E8J6 738 aa22.48■■□□□ 1.19
Scube3-201ENSMUST00000043503 Zbtb7cQ8VCZ7 619 aa22.48■■□□□ 1.19
Scube3-201ENSMUST00000043503 Anp32bQ9EST5 272 aaKnown RBP22.46■■□□□ 1.19
Scube3-201ENSMUST00000043503 Cdk11bP24788 784 aaKnown RBP22.39■■□□□ 1.18
Scube3-201ENSMUST00000043503 Ifnlr1Q8CGK5 535 aa22.37■■□□□ 1.17
Scube3-201ENSMUST00000043503 Ttbk1Q6PCN3 1308 aa22.36■■□□□ 1.17
Scube3-201ENSMUST00000043503 NeflP08551 543 aa22.29■■□□□ 1.16
Scube3-201ENSMUST00000043503 Npm1Q61937 292 aaKnown RBP22.25■■□□□ 1.15
Scube3-201ENSMUST00000043503 Lmod2Q3UHZ5 550 aa22.23■■□□□ 1.15
Scube3-201ENSMUST00000043503 Gm13697A2AK42 830 aa22.22■■□□□ 1.15
Scube3-201ENSMUST00000043503 Hnrnpul2Q00PI9 745 aaKnown RBP22.2■■□□□ 1.14
Scube3-201ENSMUST00000043503 Chic1Q8CBW7 227 aa22.19■■□□□ 1.14
Scube3-201ENSMUST00000043503 TonslQ6NZL6 1363 aa22.16■■□□□ 1.14
Scube3-201ENSMUST00000043503 Nop58Q6DFW4 536 aaKnown RBP22.14■■□□□ 1.14
Scube3-201ENSMUST00000043503 4933416C03RikQ3V063 378 aa22.13■■□□□ 1.13
Scube3-201ENSMUST00000043503 Zbtb4Q5F293 982 aa22.06■■□□□ 1.12
Scube3-201ENSMUST00000043503 Pcgf6Q99NA9 353 aa22.05■■□□□ 1.12
Scube3-201ENSMUST00000043503 Plekhg3Q4VAC9 1341 aa22.04■■□□□ 1.12
Scube3-201ENSMUST00000043503 Erich6D3Z6S9 713 aa22.02■■□□□ 1.12
Scube3-201ENSMUST00000043503 Atp1b4Q99ME6 356 aa22.02■■□□□ 1.12
Scube3-201ENSMUST00000043503 Tnnt3Q9QZ47 272 aa22.01■■□□□ 1.11
Scube3-201ENSMUST00000043503 Mier1Q5UAK0 511 aa21.99■■□□□ 1.11
Scube3-201ENSMUST00000043503 Plppr3Q7TPB0 716 aa21.97■■□□□ 1.11
Scube3-201ENSMUST00000043503 Fkbp15Q6P9Q6 1216 aaKnown RBP21.92■■□□□ 1.1
Scube3-201ENSMUST00000043503 Prdm10Q3UTQ7 1184 aa21.91■■□□□ 1.1
Scube3-201ENSMUST00000043503 Supt5hO55201 1082 aaKnown RBP21.88■■□□□ 1.09
Scube3-201ENSMUST00000043503 4930567H17RikQ3V0K5 233 aa21.85■■□□□ 1.09
Scube3-201ENSMUST00000043503 Gm13695A2AK44 830 aa21.8■■□□□ 1.08
Scube3-201ENSMUST00000043503 Nlrp6Q91WS2 869 aa21.76■■□□□ 1.07
Scube3-201ENSMUST00000043503 Mapk8ip2Q9ERE9 830 aa21.7■■□□□ 1.06
Scube3-201ENSMUST00000043503 Polr3glQ8R0C0 218 aa21.68■■□□□ 1.06
Scube3-201ENSMUST00000043503 Abcc8B2RUS7 1588 aa21.6■■□□□ 1.05
Scube3-201ENSMUST00000043503 Ubl4bQ9CQ84 188 aa21.55■■□□□ 1.04
Scube3-201ENSMUST00000043503 Eid3Q3V124 375 aa21.54■■□□□ 1.04
Scube3-201ENSMUST00000043503 Clip1Q922J3 1391 aa21.45■■□□□ 1.02
Scube3-201ENSMUST00000043503 Brd4Q9ESU6 1400 aaKnown RBP21.45■■□□□ 1.02
Scube3-201ENSMUST00000043503 Rangap1P46061 589 aaKnown RBP21.43■■□□□ 1.02
Scube3-201ENSMUST00000043503 ClspnQ80YR7 1315 aa21.43■■□□□ 1.02
Scube3-201ENSMUST00000043503 ArxO35085 564 aa21.42■■□□□ 1.02
Scube3-201ENSMUST00000043503 DiexfQ8BTT6 772 aaKnown RBP21.36■■□□□ 1.01
Scube3-201ENSMUST00000043503 Hdac5Q9Z2V6 1113 aa21.35■■□□□ 1.01
Scube3-201ENSMUST00000043503 Chic2Q9D9G3 165 aa21.34■■□□□ 1.01
Scube3-201ENSMUST00000043503 Csrnp3P59055 597 aa21.32■■□□□ 1
Scube3-201ENSMUST00000043503 Safb2Q80YR5 991 aaKnown RBP21.32■■□□□ 1
Scube3-201ENSMUST00000043503 Rb1cc1Q9ESK9 1588 aa21.3■■□□□ 1
Scube3-201ENSMUST00000043503 DaxxO35613 739 aa21.23■□□□□ 0.99
Scube3-201ENSMUST00000043503 P3h3Q8CG70 732 aa21.2■□□□□ 0.98
Scube3-201ENSMUST00000043503 Rtl5Q5DTT4 599 aa21.19■□□□□ 0.98
Scube3-201ENSMUST00000043503 Anp32aO35381 247 aa21.18■□□□□ 0.98
Scube3-201ENSMUST00000043503 Gm38655A0A286YDK6 273 aa21.18■□□□□ 0.98
Scube3-201ENSMUST00000043503 Myt1Q8CFC2 1127 aa21.16■□□□□ 0.98
Scube3-201ENSMUST00000043503 Rad21Q61550 635 aaKnown RBP21.15■□□□□ 0.98
Scube3-201ENSMUST00000043503 BlmO88700 1416 aa21.08■□□□□ 0.96
Scube3-201ENSMUST00000043503 Cep164Q5DU05 1446 aa21.06■□□□□ 0.96
Scube3-201ENSMUST00000043503 Dcaf1Q80TR8 1506 aa21.01■□□□□ 0.95
Scube3-201ENSMUST00000043503 Ccer2J3QPU5 274 aa21■□□□□ 0.95
Scube3-201ENSMUST00000043503 Sall2Q9QX96 1004 aa20.97■□□□□ 0.95
Scube3-201ENSMUST00000043503 Trim26Q99PN3 545 aa20.95■□□□□ 0.94
Scube3-201ENSMUST00000043503 Irx6Q9ER75 438 aa20.94■□□□□ 0.94
Scube3-201ENSMUST00000043503 Clstn2Q9ER65 966 aa20.92■□□□□ 0.94
Scube3-201ENSMUST00000043503 Arhgap27A2AB59 869 aa20.87■□□□□ 0.93
Scube3-201ENSMUST00000043503 Rgl3Q3UYI5 709 aa20.87■□□□□ 0.93
Scube3-201ENSMUST00000043503 Fgd1P52734 960 aa20.86■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 189.3 ms