RNA–Protein interactions for RNA: ENSMUST00000034981.13

Xrn1-201, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Xrn1, Length 5,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-201ENSMUST00000034981 NischQ80TM9 1593 aa12.45□□□□□ -0.42
Xrn1-201ENSMUST00000034981 Abcc9P70170 1546 aa12.07□□□□□ -0.48
Xrn1-201ENSMUST00000034981 Gm35339A0A140LHH9 1649 aa12.03□□□□□ -0.48
Xrn1-201ENSMUST00000034981 Rhox8Q6VSS7 320 aa11.82□□□□□ -0.52
Xrn1-201ENSMUST00000034981 Abcc8B2RUS7 1588 aa11.81□□□□□ -0.52
Xrn1-201ENSMUST00000034981 Rtl1Q7M732 1744 aa11.29□□□□□ -0.6
Xrn1-201ENSMUST00000034981 Ccdc180J3QNE4 1664 aa11.2□□□□□ -0.62
Xrn1-201ENSMUST00000034981 Zcchc6Q5BLK4 1491 aaKnown RBP11.09□□□□□ -0.63
Xrn1-201ENSMUST00000034981 Dcaf1Q80TR8 1506 aa10.99□□□□□ -0.65
Xrn1-201ENSMUST00000034981 ScribQ80U72 1612 aa10.96□□□□□ -0.66
Xrn1-201ENSMUST00000034981 Ccdc136Q3TVA9 1136 aa10.95□□□□□ -0.66
Xrn1-201ENSMUST00000034981 Rb1cc1Q9ESK9 1588 aa10.88□□□□□ -0.67
Xrn1-201ENSMUST00000034981 HrcG5E8J6 738 aa10.87□□□□□ -0.67
Xrn1-201ENSMUST00000034981 Rpgrip1Q9EPQ2 1331 aa10.83□□□□□ -0.68
Xrn1-201ENSMUST00000034981 Kdm5dQ62240 1548 aa10.78□□□□□ -0.68
Xrn1-201ENSMUST00000034981 Baz1aO88379 1555 aa10.77□□□□□ -0.69
Xrn1-201ENSMUST00000034981 Ehmt2Q9Z148 1263 aaKnown RBP10.74□□□□□ -0.69
Xrn1-201ENSMUST00000034981 Trim41Q5NCC3 630 aa10.71□□□□□ -0.69
Xrn1-201ENSMUST00000034981 Acin1Q9JIX8 1338 aaKnown RBP10.7□□□□□ -0.7
Xrn1-201ENSMUST00000034981 NacadQ5SWP3 1504 aa10.68□□□□□ -0.7
Xrn1-201ENSMUST00000034981 Crybg2B7ZCC2 1516 aa10.56□□□□□ -0.72
Xrn1-201ENSMUST00000034981 Smarca2Q6DIC0 1577 aa10.53□□□□□ -0.72
Xrn1-201ENSMUST00000034981 Cep164Q5DU05 1446 aa10.49□□□□□ -0.73
Xrn1-201ENSMUST00000034981 Sycp2Q9CUU3 1500 aa10.45□□□□□ -0.74
Xrn1-201ENSMUST00000034981 Chic1Q8CBW7 227 aa10.42□□□□□ -0.74
Xrn1-201ENSMUST00000034981 Cngb1E1AZ71 1325 aa10.4□□□□□ -0.74
Xrn1-201ENSMUST00000034981 Rsf1E9PWW9 1441 aaKnown RBP10.38□□□□□ -0.75
Xrn1-201ENSMUST00000034981 Gab3Q8BSM5 595 aa10.37□□□□□ -0.75
Xrn1-201ENSMUST00000034981 Cecr2E9Q2Z1 1453 aa10.36□□□□□ -0.75
Xrn1-201ENSMUST00000034981 Brd4Q9ESU6 1400 aaKnown RBP10.35□□□□□ -0.75
Xrn1-201ENSMUST00000034981 Pcgf6Q99NA9 353 aa10.34□□□□□ -0.75
Xrn1-201ENSMUST00000034981 Ccdc88bQ4QRL3 1481 aa10.3□□□□□ -0.76
Xrn1-201ENSMUST00000034981 Golga3P55937 1487 aa10.28□□□□□ -0.76
Xrn1-201ENSMUST00000034981 Esf1Q3V1V3 845 aaKnown RBP10.24□□□□□ -0.77
Xrn1-201ENSMUST00000034981 BicraF8VPZ9 1578 aa10.21□□□□□ -0.77
Xrn1-201ENSMUST00000034981 CftrP26361 1476 aa10.21□□□□□ -0.78
Xrn1-201ENSMUST00000034981 Synj1Q8CHC4 1574 aa10.2□□□□□ -0.78
Xrn1-201ENSMUST00000034981 Supt5hO55201 1082 aaKnown RBP10.17□□□□□ -0.78
Xrn1-201ENSMUST00000034981 Mier1Q5UAK0 511 aa10.11□□□□□ -0.79
Xrn1-201ENSMUST00000034981 NefmP08553 848 aa10.07□□□□□ -0.8
Xrn1-201ENSMUST00000034981 Zeb1Q64318 1117 aa10.07□□□□□ -0.8
Xrn1-201ENSMUST00000034981 Top2bQ64511 1612 aa10.03□□□□□ -0.8
Xrn1-201ENSMUST00000034981 Cttnbp2B9EJA2 1648 aa10.01□□□□□ -0.81
Xrn1-201ENSMUST00000034981 UbtfP25976 765 aaKnown RBP9.99□□□□□ -0.81
Xrn1-201ENSMUST00000034981 Smarca4Q3TKT4 1613 aaKnown RBP9.98□□□□□ -0.81
Xrn1-201ENSMUST00000034981 Myt1lP97500 1187 aa9.97□□□□□ -0.81
Xrn1-201ENSMUST00000034981 Fmn1Q05860 1466 aa9.96□□□□□ -0.81
Xrn1-201ENSMUST00000034981 Sall2Q9QX96 1004 aa9.95□□□□□ -0.82
Xrn1-201ENSMUST00000034981 Rapgef2Q8CHG7 1496 aa9.94□□□□□ -0.82
Xrn1-201ENSMUST00000034981 Cep162Q6ZQ06 1403 aa9.93□□□□□ -0.82
Xrn1-201ENSMUST00000034981 Neurod1Q60867 357 aa9.91□□□□□ -0.82
Xrn1-201ENSMUST00000034981 Cc2d2aQ8CFW7 1633 aa9.9□□□□□ -0.82
Xrn1-201ENSMUST00000034981 Npm2Q80W85 207 aa9.9□□□□□ -0.82
Xrn1-201ENSMUST00000034981 Top2aQ01320 1528 aaKnown RBP9.88□□□□□ -0.83
Xrn1-201ENSMUST00000034981 Iqgap2Q3UQ44 1575 aa9.85□□□□□ -0.83
Xrn1-201ENSMUST00000034981 Atad2bE9Q166 1460 aaKnown RBP9.85□□□□□ -0.83
Xrn1-201ENSMUST00000034981 Aebp2Q9Z248 504 aaKnown RBP9.83□□□□□ -0.84
Xrn1-201ENSMUST00000034981 Plekhg3Q4VAC9 1341 aa9.83□□□□□ -0.84
Xrn1-201ENSMUST00000034981 Clip1Q922J3 1391 aa9.83□□□□□ -0.84
Xrn1-201ENSMUST00000034981 Las1lA2BE28 776 aaKnown RBP9.79□□□□□ -0.84
Xrn1-201ENSMUST00000034981 Wdr66E9Q743 1299 aa9.78□□□□□ -0.84
Xrn1-201ENSMUST00000034981 Il27Q8K3I6 234 aa9.78□□□□□ -0.84
Xrn1-201ENSMUST00000034981 Pds5bQ4VA53 1446 aaKnown RBP9.77□□□□□ -0.85
Xrn1-201ENSMUST00000034981 PtprkP35822 1457 aa9.74□□□□□ -0.85
Xrn1-201ENSMUST00000034981 Ppargc1bQ8VHJ7 1014 aa9.73□□□□□ -0.85
Xrn1-201ENSMUST00000034981 Eif4g1Q6NZJ6 1600 aaKnown RBP9.71□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Frmpd1A2AKB4 1549 aa9.71□□□□□ -0.86
Xrn1-201ENSMUST00000034981 ClspnQ80YR7 1315 aa9.71□□□□□ -0.86
Xrn1-201ENSMUST00000034981 TonslQ6NZL6 1363 aa9.7□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Arhgap35Q91YM2 1499 aa9.7□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Kif15Q6P9L6 1387 aa9.7□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Eea1Q8BL66 1411 aa9.69□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Ap3b1Q9Z1T1 1105 aa9.67□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Setd5Q5XJV7 1441 aa9.67□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Anks4bQ8K3X6 423 aa9.67□□□□□ -0.86
Xrn1-201ENSMUST00000034981 TnnQ80Z71 1560 aa9.67□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Arap1Q4LDD4 1452 aa9.66□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Eid3Q3V124 375 aa9.66□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Ncapd3Q6ZQK0 1506 aa9.65□□□□□ -0.86
Xrn1-201ENSMUST00000034981 NrkQ9R0G8 1455 aa9.65□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Nop58Q6DFW4 536 aaKnown RBP9.65□□□□□ -0.86
Xrn1-201ENSMUST00000034981 Wdr62Q3U3T8 1523 aa9.64□□□□□ -0.87
Xrn1-201ENSMUST00000034981 Cdk11bP24788 784 aaKnown RBP9.63□□□□□ -0.87
Xrn1-201ENSMUST00000034981 Shroom4Q1W617 1475 aa9.61□□□□□ -0.87
Xrn1-201ENSMUST00000034981 Lamc3Q9R0B6 1581 aa9.6□□□□□ -0.87
Xrn1-201ENSMUST00000034981 Map3k1P53349 1493 aa9.57□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Ccdc18Q640L5 1455 aa9.57□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Arhgef5E9Q7D5 1581 aa9.57□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Camsap1A2AHC3 1581 aa9.56□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Csrnp3P59055 597 aa9.56□□□□□ -0.88
Xrn1-201ENSMUST00000034981 BlmO88700 1416 aa9.56□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Ercc6F8VPZ5 1481 aa9.56□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Mroh2bQ7M6Y6 1581 aa9.55□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Naip1Q9QWK5 1403 aa9.55□□□□□ -0.88
Xrn1-201ENSMUST00000034981 1700123L14RikQ3V2K7 440 aa9.54□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Grin2bQ01097 1482 aa9.54□□□□□ -0.88
Xrn1-201ENSMUST00000034981 AqrQ8CFQ3 1481 aaKnown RBP9.53□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Kdm5bQ80Y84 1544 aa9.53□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Lmod2Q3UHZ5 550 aa9.53□□□□□ -0.88
Xrn1-201ENSMUST00000034981 Npm1Q61937 292 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 99.3 ms