RNA–Protein interactions for RNA: ENSMUST00000033866.8

Vps36-201, Transcript of Vacuolar protein-sorting-associated protein 36, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps36, Length 3,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps36-201ENSMUST00000033866 NischQ80TM9 1593 aa24.46■■□□□ 1.51
Vps36-201ENSMUST00000033866 Rhox8Q6VSS7 320 aa23.76■■□□□ 1.39
Vps36-201ENSMUST00000033866 Abcc9P70170 1546 aa23.48■■□□□ 1.35
Vps36-201ENSMUST00000033866 Gm35339A0A140LHH9 1649 aa23.34■■□□□ 1.33
Vps36-201ENSMUST00000033866 Abcc8B2RUS7 1588 aa23.09■■□□□ 1.29
Vps36-201ENSMUST00000033866 Ccdc136Q3TVA9 1136 aa21.97■■□□□ 1.11
Vps36-201ENSMUST00000033866 Rtl1Q7M732 1744 aa21.55■■□□□ 1.04
Vps36-201ENSMUST00000033866 ScribQ80U72 1612 aa21.53■■□□□ 1.04
Vps36-201ENSMUST00000033866 Rb1cc1Q9ESK9 1588 aa21.43■■□□□ 1.02
Vps36-201ENSMUST00000033866 Ccdc180J3QNE4 1664 aa21.42■■□□□ 1.02
Vps36-201ENSMUST00000033866 Zcchc6Q5BLK4 1491 aaKnown RBP21.33■■□□□ 1.01
Vps36-201ENSMUST00000033866 Kdm5dQ62240 1548 aa21.31■■□□□ 1
Vps36-201ENSMUST00000033866 Ehmt2Q9Z148 1263 aaKnown RBP21.26■□□□□ 0.99
Vps36-201ENSMUST00000033866 Dcaf1Q80TR8 1506 aa21.16■□□□□ 0.98
Vps36-201ENSMUST00000033866 NacadQ5SWP3 1504 aa21.16■□□□□ 0.98
Vps36-201ENSMUST00000033866 Trim41Q5NCC3 630 aa21.11■□□□□ 0.97
Vps36-201ENSMUST00000033866 Cngb1E1AZ71 1325 aa21.06■□□□□ 0.96
Vps36-201ENSMUST00000033866 Baz1aO88379 1555 aa21.04■□□□□ 0.96
Vps36-201ENSMUST00000033866 Esf1Q3V1V3 845 aaKnown RBP20.88■□□□□ 0.93
Vps36-201ENSMUST00000033866 Gab3Q8BSM5 595 aa20.83■□□□□ 0.93
Vps36-201ENSMUST00000033866 HrcG5E8J6 738 aa20.81■□□□□ 0.92
Vps36-201ENSMUST00000033866 Sycp2Q9CUU3 1500 aa20.64■□□□□ 0.9
Vps36-201ENSMUST00000033866 Chic1Q8CBW7 227 aa20.46■□□□□ 0.87
Vps36-201ENSMUST00000033866 Smarca2Q6DIC0 1577 aa20.44■□□□□ 0.86
Vps36-201ENSMUST00000033866 Cecr2E9Q2Z1 1453 aa20.4■□□□□ 0.86
Vps36-201ENSMUST00000033866 Crybg2B7ZCC2 1516 aa20.38■□□□□ 0.85
Vps36-201ENSMUST00000033866 Brd4Q9ESU6 1400 aaKnown RBP20.37■□□□□ 0.85
Vps36-201ENSMUST00000033866 Rpgrip1Q9EPQ2 1331 aa20.25■□□□□ 0.83
Vps36-201ENSMUST00000033866 Acin1Q9JIX8 1338 aaKnown RBP20.23■□□□□ 0.83
Vps36-201ENSMUST00000033866 Cep164Q5DU05 1446 aa20.17■□□□□ 0.82
Vps36-201ENSMUST00000033866 Myt1lP97500 1187 aa20.17■□□□□ 0.82
Vps36-201ENSMUST00000033866 Rsf1E9PWW9 1441 aaKnown RBP20.14■□□□□ 0.81
Vps36-201ENSMUST00000033866 BicraF8VPZ9 1578 aa20.12■□□□□ 0.81
Vps36-201ENSMUST00000033866 Npm2Q80W85 207 aa20.08■□□□□ 0.81
Vps36-201ENSMUST00000033866 Il27Q8K3I6 234 aa20.06■□□□□ 0.8
Vps36-201ENSMUST00000033866 Golga3P55937 1487 aa20.05■□□□□ 0.8
Vps36-201ENSMUST00000033866 Synj1Q8CHC4 1574 aa20.05■□□□□ 0.8
Vps36-201ENSMUST00000033866 Ccdc88bQ4QRL3 1481 aa20.04■□□□□ 0.8
Vps36-201ENSMUST00000033866 CftrP26361 1476 aa19.98■□□□□ 0.79
Vps36-201ENSMUST00000033866 UbtfP25976 765 aaKnown RBP19.84■□□□□ 0.77
Vps36-201ENSMUST00000033866 Zeb1Q64318 1117 aa19.83■□□□□ 0.76
Vps36-201ENSMUST00000033866 Smarca4Q3TKT4 1613 aaKnown RBP19.76■□□□□ 0.75
Vps36-201ENSMUST00000033866 Cttnbp2B9EJA2 1648 aa19.66■□□□□ 0.74
Vps36-201ENSMUST00000033866 Ap3b1Q9Z1T1 1105 aa19.63■□□□□ 0.73
Vps36-201ENSMUST00000033866 Mier1Q5UAK0 511 aa19.59■□□□□ 0.73
Vps36-201ENSMUST00000033866 Pds5bQ4VA53 1446 aaKnown RBP19.58■□□□□ 0.73
Vps36-201ENSMUST00000033866 Iqgap2Q3UQ44 1575 aa19.58■□□□□ 0.72
Vps36-201ENSMUST00000033866 Atad2bE9Q166 1460 aaKnown RBP19.57■□□□□ 0.72
Vps36-201ENSMUST00000033866 Plekhg3Q4VAC9 1341 aa19.52■□□□□ 0.72
Vps36-201ENSMUST00000033866 Cc2d2aQ8CFW7 1633 aa19.5■□□□□ 0.71
Vps36-201ENSMUST00000033866 Kif15Q6P9L6 1387 aa19.49■□□□□ 0.71
Vps36-201ENSMUST00000033866 Fmn1Q05860 1466 aa19.47■□□□□ 0.71
Vps36-201ENSMUST00000033866 Ubl4bQ9CQ84 188 aa19.45■□□□□ 0.7
Vps36-201ENSMUST00000033866 Npm1Q61937 292 aaKnown RBP19.41■□□□□ 0.7
Vps36-201ENSMUST00000033866 Pcgf6Q99NA9 353 aa19.4■□□□□ 0.7
Vps36-201ENSMUST00000033866 Ercc6F8VPZ5 1481 aa19.39■□□□□ 0.69
Vps36-201ENSMUST00000033866 Top2bQ64511 1612 aa19.39■□□□□ 0.69
Vps36-201ENSMUST00000033866 Supt5hO55201 1082 aaKnown RBP19.34■□□□□ 0.69
Vps36-201ENSMUST00000033866 NefmP08553 848 aa19.33■□□□□ 0.68
Vps36-201ENSMUST00000033866 Clip1Q922J3 1391 aa19.33■□□□□ 0.68
Vps36-201ENSMUST00000033866 Rapgef2Q8CHG7 1496 aa19.33■□□□□ 0.68
Vps36-201ENSMUST00000033866 Wdr66E9Q743 1299 aa19.31■□□□□ 0.68
Vps36-201ENSMUST00000033866 Cep162Q6ZQ06 1403 aa19.3■□□□□ 0.68
Vps36-201ENSMUST00000033866 Frmpd1A2AKB4 1549 aa19.26■□□□□ 0.67
Vps36-201ENSMUST00000033866 Ppargc1bQ8VHJ7 1014 aa19.22■□□□□ 0.67
Vps36-201ENSMUST00000033866 Lmod2Q3UHZ5 550 aa19.21■□□□□ 0.67
Vps36-201ENSMUST00000033866 Las1lA2BE28 776 aaKnown RBP19.2■□□□□ 0.66
Vps36-201ENSMUST00000033866 Top2aQ01320 1528 aaKnown RBP19.18■□□□□ 0.66
Vps36-201ENSMUST00000033866 Wdr62Q3U3T8 1523 aa19.1■□□□□ 0.65
Vps36-201ENSMUST00000033866 Ccdc18Q640L5 1455 aa19.09■□□□□ 0.65
Vps36-201ENSMUST00000033866 Fam50aQ9WV03 339 aaKnown RBP19.08■□□□□ 0.65
Vps36-201ENSMUST00000033866 Cux2P70298 1426 aa19.08■□□□□ 0.64
Vps36-201ENSMUST00000033866 Setd5Q5XJV7 1441 aa19.06■□□□□ 0.64
Vps36-201ENSMUST00000033866 PtprkP35822 1457 aa19.06■□□□□ 0.64
Vps36-201ENSMUST00000033866 Phldb1Q6PDH0 1371 aaKnown RBP19.05■□□□□ 0.64
Vps36-201ENSMUST00000033866 Ube2uB1AUC4 352 aa19.04■□□□□ 0.64
Vps36-201ENSMUST00000033866 Eid3Q3V124 375 aa19.02■□□□□ 0.64
Vps36-201ENSMUST00000033866 Eea1Q8BL66 1411 aa18.95■□□□□ 0.62
Vps36-201ENSMUST00000033866 Sall2Q9QX96 1004 aa18.92■□□□□ 0.62
Vps36-201ENSMUST00000033866 BlmO88700 1416 aa18.91■□□□□ 0.62
Vps36-201ENSMUST00000033866 Baz1bQ9Z277 1479 aa18.9■□□□□ 0.62
Vps36-201ENSMUST00000033866 Arhgap35Q91YM2 1499 aa18.89■□□□□ 0.62
Vps36-201ENSMUST00000033866 TonslQ6NZL6 1363 aa18.89■□□□□ 0.61
Vps36-201ENSMUST00000033866 Dnajc5bQ9CQ94 199 aa18.88■□□□□ 0.61
Vps36-201ENSMUST00000033866 Lamc3Q9R0B6 1581 aa18.84■□□□□ 0.61
Vps36-201ENSMUST00000033866 Aebp2Q9Z248 504 aaKnown RBP18.83■□□□□ 0.6
Vps36-201ENSMUST00000033866 Shroom4Q1W617 1475 aa18.82■□□□□ 0.6
Vps36-201ENSMUST00000033866 LrpprcQ6PB66 1392 aaKnown RBP18.82■□□□□ 0.6
Vps36-201ENSMUST00000033866 Camsap1A2AHC3 1581 aa18.81■□□□□ 0.6
Vps36-201ENSMUST00000033866 TnnQ80Z71 1560 aa18.77■□□□□ 0.6
Vps36-201ENSMUST00000033866 Grin2bQ01097 1482 aa18.77■□□□□ 0.6
Vps36-201ENSMUST00000033866 Dhx29Q6PGC1 1365 aaKnown RBP18.74■□□□□ 0.59
Vps36-201ENSMUST00000033866 Arap1Q4LDD4 1452 aa18.72■□□□□ 0.59
Vps36-201ENSMUST00000033866 NrkQ9R0G8 1455 aa18.72■□□□□ 0.59
Vps36-201ENSMUST00000033866 Chic2Q9D9G3 165 aa18.68■□□□□ 0.58
Vps36-201ENSMUST00000033866 Duox2A2AQ99 1517 aa18.66■□□□□ 0.58
Vps36-201ENSMUST00000033866 Rad54l2Q99NG0 1466 aa18.66■□□□□ 0.58
Vps36-201ENSMUST00000033866 Mapk8ip2Q9ERE9 830 aa18.65■□□□□ 0.58
Vps36-201ENSMUST00000033866 Fkbp15Q6P9Q6 1216 aaKnown RBP18.63■□□□□ 0.57
Vps36-201ENSMUST00000033866 Aebp1Q640N1 1128 aa18.63■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms