RNA–Protein interactions for RNA: ENSMUST00000030547.14

Hspg2-201, Transcript of Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Hspg2, Length 14,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2-201ENSMUST00000030547 Rpgrip1Q9EPQ2 1331 aa12.39□□□□□ -0.43
Hspg2-201ENSMUST00000030547 Rhox8Q6VSS7 320 aa12.38□□□□□ -0.43
Hspg2-201ENSMUST00000030547 Las1lA2BE28 776 aaKnown RBP12.11□□□□□ -0.47
Hspg2-201ENSMUST00000030547 Cngb1E1AZ71 1325 aa11.95□□□□□ -0.5
Hspg2-201ENSMUST00000030547 Pelp1Q9DBD5 1123 aaKnown RBP11.66□□□□□ -0.54
Hspg2-201ENSMUST00000030547 Myt1Q8CFC2 1127 aa11.61□□□□□ -0.55
Hspg2-201ENSMUST00000030547 Ehmt2Q9Z148 1263 aaKnown RBP11.51□□□□□ -0.57
Hspg2-201ENSMUST00000030547 Amer1Q7TS75 1132 aa11.38□□□□□ -0.59
Hspg2-201ENSMUST00000030547 CenpbP27790 599 aa11.35□□□□□ -0.59
Hspg2-201ENSMUST00000030547 Wdr66E9Q743 1299 aa11.22□□□□□ -0.61
Hspg2-201ENSMUST00000030547 Zeb1Q64318 1117 aa11.19□□□□□ -0.62
Hspg2-201ENSMUST00000030547 Acin1Q9JIX8 1338 aaKnown RBP11.12□□□□□ -0.63
Hspg2-201ENSMUST00000030547 DiexfQ8BTT6 772 aaKnown RBP11.06□□□□□ -0.64
Hspg2-201ENSMUST00000030547 Ccdc136Q3TVA9 1136 aa11□□□□□ -0.65
Hspg2-201ENSMUST00000030547 NefmP08553 848 aa10.95□□□□□ -0.66
Hspg2-201ENSMUST00000030547 4930567H17RikQ3V0K5 233 aa10.9□□□□□ -0.66
Hspg2-201ENSMUST00000030547 Pcgf6Q99NA9 353 aa10.88□□□□□ -0.67
Hspg2-201ENSMUST00000030547 Rtl5Q5DTT4 599 aa10.84□□□□□ -0.67
Hspg2-201ENSMUST00000030547 Trim41Q5NCC3 630 aa10.83□□□□□ -0.68
Hspg2-201ENSMUST00000030547 Gab3Q8BSM5 595 aa10.83□□□□□ -0.68
Hspg2-201ENSMUST00000030547 Stra8P70278 393 aa10.82□□□□□ -0.68
Hspg2-201ENSMUST00000030547 Ube2uB1AUC4 352 aa10.77□□□□□ -0.69
Hspg2-201ENSMUST00000030547 Esf1Q3V1V3 845 aaKnown RBP10.76□□□□□ -0.69
Hspg2-201ENSMUST00000030547 Cdk11bP24788 784 aaKnown RBP10.74□□□□□ -0.69
Hspg2-201ENSMUST00000030547 Tnnt3Q9QZ47 272 aa10.7□□□□□ -0.7
Hspg2-201ENSMUST00000030547 HrcG5E8J6 738 aa10.66□□□□□ -0.7
Hspg2-201ENSMUST00000030547 Ttbk1Q6PCN3 1308 aa10.65□□□□□ -0.71
Hspg2-201ENSMUST00000030547 Npm2Q80W85 207 aa10.63□□□□□ -0.71
Hspg2-201ENSMUST00000030547 UbtfP25976 765 aaKnown RBP10.61□□□□□ -0.71
Hspg2-201ENSMUST00000030547 Nop58Q6DFW4 536 aaKnown RBP10.6□□□□□ -0.71
Hspg2-201ENSMUST00000030547 4933416C03RikQ3V063 378 aa10.6□□□□□ -0.71
Hspg2-201ENSMUST00000030547 Myt1lP97500 1187 aa10.6□□□□□ -0.71
Hspg2-201ENSMUST00000030547 Rtl1Q7M732 1744 aa10.57□□□□□ -0.72
Hspg2-201ENSMUST00000030547 Supt5hO55201 1082 aaKnown RBP10.57□□□□□ -0.72
Hspg2-201ENSMUST00000030547 Ccdc180J3QNE4 1664 aa10.55□□□□□ -0.72
Hspg2-201ENSMUST00000030547 Slc24a1Q91WD8 1130 aa10.55□□□□□ -0.72
Hspg2-201ENSMUST00000030547 NischQ80TM9 1593 aa10.4□□□□□ -0.74
Hspg2-201ENSMUST00000030547 Aplp2Q06335 707 aa10.37□□□□□ -0.75
Hspg2-201ENSMUST00000030547 Ythdc1E9Q5K9 736 aaKnown RBP10.37□□□□□ -0.75
Hspg2-201ENSMUST00000030547 Ccdc9Q8VC31 543 aaKnown RBP10.37□□□□□ -0.75
Hspg2-201ENSMUST00000030547 NrdcQ8BHG1 1161 aa10.37□□□□□ -0.75
Hspg2-201ENSMUST00000030547 Anp32aO35381 247 aa10.36□□□□□ -0.75
Hspg2-201ENSMUST00000030547 Anks4bQ8K3X6 423 aa10.32□□□□□ -0.76
Hspg2-201ENSMUST00000030547 NeflP08551 543 aa10.32□□□□□ -0.76
Hspg2-201ENSMUST00000030547 Ppargc1bQ8VHJ7 1014 aa10.32□□□□□ -0.76
Hspg2-201ENSMUST00000030547 Neurod1Q60867 357 aa10.31□□□□□ -0.76
Hspg2-201ENSMUST00000030547 NclP09405 707 aaKnown RBP10.31□□□□□ -0.76
Hspg2-201ENSMUST00000030547 Eif5bQ05D44 1216 aaKnown RBP10.3□□□□□ -0.76
Hspg2-201ENSMUST00000030547 Anp32bQ9EST5 272 aaKnown RBP10.27□□□□□ -0.77
Hspg2-201ENSMUST00000030547 Mier1Q5UAK0 511 aa10.26□□□□□ -0.77
Hspg2-201ENSMUST00000030547 TonslQ6NZL6 1363 aa10.26□□□□□ -0.77
Hspg2-201ENSMUST00000030547 ClspnQ80YR7 1315 aa10.24□□□□□ -0.77
Hspg2-201ENSMUST00000030547 Bcl11aQ9QYE3 773 aa10.22□□□□□ -0.77
Hspg2-201ENSMUST00000030547 Csrnp3P59055 597 aa10.2□□□□□ -0.78
Hspg2-201ENSMUST00000030547 DaxxO35613 739 aa10.18□□□□□ -0.78
Hspg2-201ENSMUST00000030547 Fam50aQ9WV03 339 aaKnown RBP10.14□□□□□ -0.79
Hspg2-201ENSMUST00000030547 Sall2Q9QX96 1004 aa10.09□□□□□ -0.79
Hspg2-201ENSMUST00000030547 Gm38655A0A286YDK6 273 aa10.08□□□□□ -0.8
Hspg2-201ENSMUST00000030547 Ap3b1Q9Z1T1 1105 aa10.05□□□□□ -0.8
Hspg2-201ENSMUST00000030547 Hsp90aa1P07901 733 aaKnown RBP10.05□□□□□ -0.8
Hspg2-201ENSMUST00000030547 1700123L14RikQ3V2K7 440 aa10.04□□□□□ -0.8
Hspg2-201ENSMUST00000030547 Il27Q8K3I6 234 aa9.97□□□□□ -0.81
Hspg2-201ENSMUST00000030547 Dcaf1Q80TR8 1506 aa9.96□□□□□ -0.81
Hspg2-201ENSMUST00000030547 Calr4Q3TQS0 420 aa9.96□□□□□ -0.82
Hspg2-201ENSMUST00000030547 Ppp4r2Q0VGB7 417 aa9.92□□□□□ -0.82
Hspg2-201ENSMUST00000030547 Ccdc27Q3V036 639 aa9.9□□□□□ -0.82
Hspg2-201ENSMUST00000030547 Fam71e1A1L3C1 212 aa9.88□□□□□ -0.83
Hspg2-201ENSMUST00000030547 Irx3P81067 507 aa9.88□□□□□ -0.83
Hspg2-201ENSMUST00000030547 Mapk8ip2Q9ERE9 830 aa9.88□□□□□ -0.83
Hspg2-201ENSMUST00000030547 Os9Q8K2C7 672 aa9.88□□□□□ -0.83
Hspg2-201ENSMUST00000030547 Plekhg3Q4VAC9 1341 aa9.85□□□□□ -0.83
Hspg2-201ENSMUST00000030547 Wdr43Q6ZQL4 677 aaKnown RBP9.85□□□□□ -0.83
Hspg2-201ENSMUST00000030547 CatipB9EKE5 520 aa9.83□□□□□ -0.84
Hspg2-201ENSMUST00000030547 Eid3Q3V124 375 aa9.82□□□□□ -0.84
Hspg2-201ENSMUST00000030547 Zcchc6Q5BLK4 1491 aaKnown RBP9.8□□□□□ -0.84
Hspg2-201ENSMUST00000030547 Upf2A2AT37 1269 aaKnown RBP9.78□□□□□ -0.84
Hspg2-201ENSMUST00000030547 Ccer2J3QPU5 274 aa9.78□□□□□ -0.84
Hspg2-201ENSMUST00000030547 Pknox2Q8BG99 474 aa9.78□□□□□ -0.84
Hspg2-201ENSMUST00000030547 Trim44Q9QXA7 346 aa9.77□□□□□ -0.85
Hspg2-201ENSMUST00000030547 ArxO35085 564 aa9.75□□□□□ -0.85
Hspg2-201ENSMUST00000030547 Nlrp6Q91WS2 869 aa9.75□□□□□ -0.85
Hspg2-201ENSMUST00000030547 Tnnt2P50752 301 aa9.74□□□□□ -0.85
Hspg2-201ENSMUST00000030547 Lmod2Q3UHZ5 550 aa9.73□□□□□ -0.85
Hspg2-201ENSMUST00000030547 Lmod3E9QA62 571 aa9.73□□□□□ -0.85
Hspg2-201ENSMUST00000030547 AU015836B2RUM3 263 aa9.73□□□□□ -0.85
Hspg2-201ENSMUST00000030547 Clip1Q922J3 1391 aa9.7□□□□□ -0.86
Hspg2-201ENSMUST00000030547 Polr3glQ8R0C0 218 aa9.69□□□□□ -0.86
Hspg2-201ENSMUST00000030547 Mrs2Q5NCE8 434 aa9.68□□□□□ -0.86
Hspg2-201ENSMUST00000030547 Aebp2Q9Z248 504 aaKnown RBP9.68□□□□□ -0.86
Hspg2-201ENSMUST00000030547 CanxP35564 591 aaKnown RBP9.67□□□□□ -0.86
Hspg2-201ENSMUST00000030547 Cep164Q5DU05 1446 aa9.66□□□□□ -0.86
Hspg2-201ENSMUST00000030547 Htatsf1Q8BGC0 757 aa9.66□□□□□ -0.86
Hspg2-201ENSMUST00000030547 DekQ7TNV0 380 aaKnown RBP9.64□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Gtf3c3Q3TMP1 882 aa9.63□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Zbtb4Q5F293 982 aa9.62□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Hdac5Q9Z2V6 1113 aa9.62□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Hnrnpul2Q00PI9 745 aaKnown RBP9.61□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Zbtb7cQ8VCZ7 619 aa9.61□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Adam1bQ8R534 806 aa9.61□□□□□ -0.87
Hspg2-201ENSMUST00000030547 Rad21Q61550 635 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms