RNA–Protein interactions for RNA: ENSMUST00000028850.14

Kcnip3-201, Transcript of Calsenilin, mousemouse

TSL 1 (best) BASIC

Gene Kcnip3, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnip3-201ENSMUST00000028850 NischQ80TM9 1593 aa19.24■□□□□ 0.67
Kcnip3-201ENSMUST00000028850 Gm35339A0A140LHH9 1649 aa18.83■□□□□ 0.6
Kcnip3-201ENSMUST00000028850 Abcc9P70170 1546 aa18.64■□□□□ 0.57
Kcnip3-201ENSMUST00000028850 Abcc8B2RUS7 1588 aa18.26■□□□□ 0.51
Kcnip3-201ENSMUST00000028850 Rhox8Q6VSS7 320 aa17.96■□□□□ 0.47
Kcnip3-201ENSMUST00000028850 Rpgrip1Q9EPQ2 1331 aa17.82■□□□□ 0.44
Kcnip3-201ENSMUST00000028850 Rtl1Q7M732 1744 aa17.82■□□□□ 0.44
Kcnip3-201ENSMUST00000028850 Ccdc180J3QNE4 1664 aa17.67■□□□□ 0.42
Kcnip3-201ENSMUST00000028850 Acin1Q9JIX8 1338 aaKnown RBP17.41■□□□□ 0.38
Kcnip3-201ENSMUST00000028850 Zcchc6Q5BLK4 1491 aaKnown RBP17.19■□□□□ 0.34
Kcnip3-201ENSMUST00000028850 Pcgf6Q99NA9 353 aa17.12■□□□□ 0.33
Kcnip3-201ENSMUST00000028850 Ehmt2Q9Z148 1263 aaKnown RBP17.11■□□□□ 0.33
Kcnip3-201ENSMUST00000028850 ScribQ80U72 1612 aa17.07■□□□□ 0.32
Kcnip3-201ENSMUST00000028850 Dcaf1Q80TR8 1506 aa16.93■□□□□ 0.3
Kcnip3-201ENSMUST00000028850 Rb1cc1Q9ESK9 1588 aa16.87■□□□□ 0.29
Kcnip3-201ENSMUST00000028850 Ube2uB1AUC4 352 aa16.78■□□□□ 0.28
Kcnip3-201ENSMUST00000028850 HrcG5E8J6 738 aa16.77■□□□□ 0.28
Kcnip3-201ENSMUST00000028850 Kdm5dQ62240 1548 aa16.75■□□□□ 0.27
Kcnip3-201ENSMUST00000028850 Trim41Q5NCC3 630 aa16.69■□□□□ 0.26
Kcnip3-201ENSMUST00000028850 Supt5hO55201 1082 aaKnown RBP16.67■□□□□ 0.26
Kcnip3-201ENSMUST00000028850 Ccdc136Q3TVA9 1136 aa16.67■□□□□ 0.26
Kcnip3-201ENSMUST00000028850 Baz1aO88379 1555 aa16.63■□□□□ 0.25
Kcnip3-201ENSMUST00000028850 NacadQ5SWP3 1504 aa16.6■□□□□ 0.25
Kcnip3-201ENSMUST00000028850 Neurod1Q60867 357 aa16.54■□□□□ 0.24
Kcnip3-201ENSMUST00000028850 Crybg2B7ZCC2 1516 aa16.25■□□□□ 0.19
Kcnip3-201ENSMUST00000028850 Sycp2Q9CUU3 1500 aa16.24■□□□□ 0.19
Kcnip3-201ENSMUST00000028850 Smarca2Q6DIC0 1577 aa16.23■□□□□ 0.19
Kcnip3-201ENSMUST00000028850 Las1lA2BE28 776 aaKnown RBP16.14■□□□□ 0.17
Kcnip3-201ENSMUST00000028850 Zeb1Q64318 1117 aa16.14■□□□□ 0.17
Kcnip3-201ENSMUST00000028850 1700123L14RikQ3V2K7 440 aa16.11■□□□□ 0.17
Kcnip3-201ENSMUST00000028850 Cep164Q5DU05 1446 aa16.11■□□□□ 0.17
Kcnip3-201ENSMUST00000028850 Sall2Q9QX96 1004 aa16.06■□□□□ 0.16
Kcnip3-201ENSMUST00000028850 Cngb1E1AZ71 1325 aa16.06■□□□□ 0.16
Kcnip3-201ENSMUST00000028850 Csrnp3P59055 597 aa16■□□□□ 0.15
Kcnip3-201ENSMUST00000028850 Anks4bQ8K3X6 423 aa15.99■□□□□ 0.15
Kcnip3-201ENSMUST00000028850 Cecr2E9Q2Z1 1453 aa15.96■□□□□ 0.14
Kcnip3-201ENSMUST00000028850 NefmP08553 848 aa15.95■□□□□ 0.14
Kcnip3-201ENSMUST00000028850 Mier1Q5UAK0 511 aa15.92■□□□□ 0.14
Kcnip3-201ENSMUST00000028850 BicraF8VPZ9 1578 aa15.9■□□□□ 0.14
Kcnip3-201ENSMUST00000028850 Brd4Q9ESU6 1400 aaKnown RBP15.88■□□□□ 0.13
Kcnip3-201ENSMUST00000028850 Chic1Q8CBW7 227 aa15.81■□□□□ 0.12
Kcnip3-201ENSMUST00000028850 Synj1Q8CHC4 1574 aa15.79■□□□□ 0.12
Kcnip3-201ENSMUST00000028850 Rsf1E9PWW9 1441 aaKnown RBP15.77■□□□□ 0.12
Kcnip3-201ENSMUST00000028850 Gab3Q8BSM5 595 aa15.76■□□□□ 0.11
Kcnip3-201ENSMUST00000028850 CenpbP27790 599 aa15.74■□□□□ 0.11
Kcnip3-201ENSMUST00000028850 Esf1Q3V1V3 845 aaKnown RBP15.74■□□□□ 0.11
Kcnip3-201ENSMUST00000028850 Aplp2Q06335 707 aa15.72■□□□□ 0.11
Kcnip3-201ENSMUST00000028850 Golga3P55937 1487 aa15.71■□□□□ 0.11
Kcnip3-201ENSMUST00000028850 Aebp2Q9Z248 504 aaKnown RBP15.71■□□□□ 0.11
Kcnip3-201ENSMUST00000028850 Ccdc88bQ4QRL3 1481 aa15.68■□□□□ 0.1
Kcnip3-201ENSMUST00000028850 Myt1Q8CFC2 1127 aa15.68■□□□□ 0.1
Kcnip3-201ENSMUST00000028850 CftrP26361 1476 aa15.67■□□□□ 0.1
Kcnip3-201ENSMUST00000028850 DiexfQ8BTT6 772 aaKnown RBP15.63■□□□□ 0.09
Kcnip3-201ENSMUST00000028850 Cdk11bP24788 784 aaKnown RBP15.62■□□□□ 0.09
Kcnip3-201ENSMUST00000028850 Wdr66E9Q743 1299 aa15.6■□□□□ 0.09
Kcnip3-201ENSMUST00000028850 Nop58Q6DFW4 536 aaKnown RBP15.59■□□□□ 0.09
Kcnip3-201ENSMUST00000028850 Gm38655A0A286YDK6 273 aa15.57■□□□□ 0.08
Kcnip3-201ENSMUST00000028850 Cttnbp2B9EJA2 1648 aa15.56■□□□□ 0.08
Kcnip3-201ENSMUST00000028850 Smarca4Q3TKT4 1613 aaKnown RBP15.54■□□□□ 0.08
Kcnip3-201ENSMUST00000028850 ClspnQ80YR7 1315 aa15.53■□□□□ 0.08
Kcnip3-201ENSMUST00000028850 Ppargc1bQ8VHJ7 1014 aa15.52■□□□□ 0.08
Kcnip3-201ENSMUST00000028850 Top2bQ64511 1612 aa15.5■□□□□ 0.07
Kcnip3-201ENSMUST00000028850 Cc2d2aQ8CFW7 1633 aa15.43■□□□□ 0.06
Kcnip3-201ENSMUST00000028850 UbtfP25976 765 aaKnown RBP15.42■□□□□ 0.06
Kcnip3-201ENSMUST00000028850 Iqgap2Q3UQ44 1575 aa15.35■□□□□ 0.05
Kcnip3-201ENSMUST00000028850 Ttbk1Q6PCN3 1308 aa15.34■□□□□ 0.05
Kcnip3-201ENSMUST00000028850 Fmn1Q05860 1466 aa15.29■□□□□ 0.04
Kcnip3-201ENSMUST00000028850 Fam71e1A1L3C1 212 aa15.27■□□□□ 0.03
Kcnip3-201ENSMUST00000028850 Atad2bE9Q166 1460 aaKnown RBP15.26■□□□□ 0.03
Kcnip3-201ENSMUST00000028850 TonslQ6NZL6 1363 aa15.26■□□□□ 0.03
Kcnip3-201ENSMUST00000028850 Bcl11aQ9QYE3 773 aa15.26■□□□□ 0.03
Kcnip3-201ENSMUST00000028850 SafbD3YXK2 937 aaKnown RBP15.23■□□□□ 0.03
Kcnip3-201ENSMUST00000028850 Hnrnpul2Q00PI9 745 aaKnown RBP15.22■□□□□ 0.03
Kcnip3-201ENSMUST00000028850 Top2aQ01320 1528 aaKnown RBP15.2■□□□□ 0.02
Kcnip3-201ENSMUST00000028850 Myt1lP97500 1187 aa15.2■□□□□ 0.02
Kcnip3-201ENSMUST00000028850 Mapk8ip2Q9ERE9 830 aa15.2■□□□□ 0.02
Kcnip3-201ENSMUST00000028850 Pds5bQ4VA53 1446 aaKnown RBP15.2■□□□□ 0.02
Kcnip3-201ENSMUST00000028850 Rapgef2Q8CHG7 1496 aa15.2■□□□□ 0.02
Kcnip3-201ENSMUST00000028850 Npm2Q80W85 207 aa15.16■□□□□ 0.02
Kcnip3-201ENSMUST00000028850 Cep162Q6ZQ06 1403 aa15.11■□□□□ 0.01
Kcnip3-201ENSMUST00000028850 Frmpd1A2AKB4 1549 aa15.07■□□□□ 0
Kcnip3-201ENSMUST00000028850 Ap3b1Q9Z1T1 1105 aa15.04■□□□□ -0
Kcnip3-201ENSMUST00000028850 Ncapd3Q6ZQK0 1506 aa15.04■□□□□ -0
Kcnip3-201ENSMUST00000028850 Il27Q8K3I6 234 aa15.04■□□□□ -0
Kcnip3-201ENSMUST00000028850 Tnnt3Q9QZ47 272 aa15.03■□□□□ -0
Kcnip3-201ENSMUST00000028850 Wdr62Q3U3T8 1523 aa15.03■□□□□ -0
Kcnip3-201ENSMUST00000028850 TnnQ80Z71 1560 aa15.01□□□□□ -0.01
Kcnip3-201ENSMUST00000028850 Ifnlr1Q8CGK5 535 aa14.98□□□□□ -0.01
Kcnip3-201ENSMUST00000028850 Plekhg3Q4VAC9 1341 aa14.97□□□□□ -0.01
Kcnip3-201ENSMUST00000028850 Ercc6F8VPZ5 1481 aa14.96□□□□□ -0.01
Kcnip3-201ENSMUST00000028850 Kif15Q6P9L6 1387 aa14.96□□□□□ -0.01
Kcnip3-201ENSMUST00000028850 Clip1Q922J3 1391 aa14.92□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 Znf710Q3U288 666 aa14.92□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 Lamc3Q9R0B6 1581 aa14.91□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 PtprkP35822 1457 aa14.91□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 PrkcshO08795 521 aa14.9□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 ArxO35085 564 aa14.9□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 Eid3Q3V124 375 aa14.9□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 Eif4g1Q6NZJ6 1600 aaKnown RBP14.9□□□□□ -0.02
Kcnip3-201ENSMUST00000028850 Unc13aQ4KUS2 1712 aa14.9□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms