RNA–Protein interactions for RNA: ENSMUST00000028003.8

Lmx1a-201, Transcript of LIM homeobox transcription factor 1-alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lmx1a, Length 3,347 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1a-201ENSMUST00000028003 Gm35339A0A140LHH9 1649 aa17.32■□□□□ 0.36
Lmx1a-201ENSMUST00000028003 NischQ80TM9 1593 aa16.89■□□□□ 0.29
Lmx1a-201ENSMUST00000028003 Abcc9P70170 1546 aa16.4■□□□□ 0.22
Lmx1a-201ENSMUST00000028003 Abcc8B2RUS7 1588 aa16.39■□□□□ 0.21
Lmx1a-201ENSMUST00000028003 ScribQ80U72 1612 aa15.77■□□□□ 0.12
Lmx1a-201ENSMUST00000028003 NacadQ5SWP3 1504 aa15.38■□□□□ 0.05
Lmx1a-201ENSMUST00000028003 Dcaf1Q80TR8 1506 aa15.25■□□□□ 0.03
Lmx1a-201ENSMUST00000028003 Kdm5dQ62240 1548 aa15.25■□□□□ 0.03
Lmx1a-201ENSMUST00000028003 Sycp2Q9CUU3 1500 aa15.06■□□□□ 0
Lmx1a-201ENSMUST00000028003 BicraF8VPZ9 1578 aa14.78□□□□□ -0.04
Lmx1a-201ENSMUST00000028003 Ccdc180J3QNE4 1664 aa14.76□□□□□ -0.05
Lmx1a-201ENSMUST00000028003 Rpgrip1Q9EPQ2 1331 aa14.75□□□□□ -0.05
Lmx1a-201ENSMUST00000028003 Rb1cc1Q9ESK9 1588 aa14.7□□□□□ -0.06
Lmx1a-201ENSMUST00000028003 Crybg2B7ZCC2 1516 aa14.69□□□□□ -0.06
Lmx1a-201ENSMUST00000028003 Baz1aO88379 1555 aa14.56□□□□□ -0.08
Lmx1a-201ENSMUST00000028003 Pds5bQ4VA53 1446 aaKnown RBP14.5□□□□□ -0.09
Lmx1a-201ENSMUST00000028003 Thoc2B1AZI6 1594 aaKnown RBP14.37□□□□□ -0.11
Lmx1a-201ENSMUST00000028003 Atad2bE9Q166 1460 aaKnown RBP14.33□□□□□ -0.12
Lmx1a-201ENSMUST00000028003 Rhox8Q6VSS7 320 aa14.25□□□□□ -0.13
Lmx1a-201ENSMUST00000028003 Dnajc5bQ9CQ94 199 aa14.2□□□□□ -0.14
Lmx1a-201ENSMUST00000028003 Baz1bQ9Z277 1479 aa14.19□□□□□ -0.14
Lmx1a-201ENSMUST00000028003 Smarca2Q6DIC0 1577 aa14.18□□□□□ -0.14
Lmx1a-201ENSMUST00000028003 Zcchc6Q5BLK4 1491 aaKnown RBP14.18□□□□□ -0.14
Lmx1a-201ENSMUST00000028003 Smarca4Q3TKT4 1613 aaKnown RBP14.16□□□□□ -0.14
Lmx1a-201ENSMUST00000028003 Ercc6F8VPZ5 1481 aa14.13□□□□□ -0.15
Lmx1a-201ENSMUST00000028003 Pcgf6Q99NA9 353 aa14.09□□□□□ -0.15
Lmx1a-201ENSMUST00000028003 Fam135aQ6NS59 1506 aa14.06□□□□□ -0.16
Lmx1a-201ENSMUST00000028003 Iqgap2Q3UQ44 1575 aa14.05□□□□□ -0.16
Lmx1a-201ENSMUST00000028003 Acin1Q9JIX8 1338 aaKnown RBP14.04□□□□□ -0.16
Lmx1a-201ENSMUST00000028003 Cc2d2aQ8CFW7 1633 aa14.03□□□□□ -0.16
Lmx1a-201ENSMUST00000028003 Wdr62Q3U3T8 1523 aa13.97□□□□□ -0.17
Lmx1a-201ENSMUST00000028003 Cecr2E9Q2Z1 1453 aa13.94□□□□□ -0.18
Lmx1a-201ENSMUST00000028003 Phldb1Q6PDH0 1371 aaKnown RBP13.91□□□□□ -0.18
Lmx1a-201ENSMUST00000028003 Frmpd1A2AKB4 1549 aa13.9□□□□□ -0.18
Lmx1a-201ENSMUST00000028003 Rtl1Q7M732 1744 aa13.86□□□□□ -0.19
Lmx1a-201ENSMUST00000028003 Las1lA2BE28 776 aaKnown RBP13.84□□□□□ -0.19
Lmx1a-201ENSMUST00000028003 Cttnbp2B9EJA2 1648 aa13.77□□□□□ -0.2
Lmx1a-201ENSMUST00000028003 Ehmt2Q9Z148 1263 aaKnown RBP13.75□□□□□ -0.21
Lmx1a-201ENSMUST00000028003 Brd4Q9ESU6 1400 aaKnown RBP13.73□□□□□ -0.21
Lmx1a-201ENSMUST00000028003 CftrP26361 1476 aa13.73□□□□□ -0.21
Lmx1a-201ENSMUST00000028003 Unc13aQ4KUS2 1712 aa13.68□□□□□ -0.22
Lmx1a-201ENSMUST00000028003 Mrc2Q64449 1479 aa13.67□□□□□ -0.22
Lmx1a-201ENSMUST00000028003 Neurod1Q60867 357 aa13.64□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 Myt1Q8CFC2 1127 aa13.64□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 CenpbP27790 599 aa13.63□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 Synj1Q8CHC4 1574 aa13.63□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 Ubl4bQ9CQ84 188 aa13.62□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 Ube2uB1AUC4 352 aa13.62□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 DiexfQ8BTT6 772 aaKnown RBP13.59□□□□□ -0.23
Lmx1a-201ENSMUST00000028003 Supt5hO55201 1082 aaKnown RBP13.57□□□□□ -0.24
Lmx1a-201ENSMUST00000028003 Rsf1E9PWW9 1441 aaKnown RBP13.44□□□□□ -0.26
Lmx1a-201ENSMUST00000028003 1700123L14RikQ3V2K7 440 aa13.43□□□□□ -0.26
Lmx1a-201ENSMUST00000028003 Lamc3Q9R0B6 1581 aa13.41□□□□□ -0.26
Lmx1a-201ENSMUST00000028003 Trim41Q5NCC3 630 aa13.38□□□□□ -0.27
Lmx1a-201ENSMUST00000028003 Cux2P70298 1426 aa13.35□□□□□ -0.27
Lmx1a-201ENSMUST00000028003 Kif15Q6P9L6 1387 aa13.32□□□□□ -0.28
Lmx1a-201ENSMUST00000028003 Lrriq1Q0P5X1 1673 aa13.32□□□□□ -0.28
Lmx1a-201ENSMUST00000028003 Ccdc136Q3TVA9 1136 aa13.31□□□□□ -0.28
Lmx1a-201ENSMUST00000028003 Esf1Q3V1V3 845 aaKnown RBP13.29□□□□□ -0.28
Lmx1a-201ENSMUST00000028003 Kif21aQ9QXL2 1672 aa13.26□□□□□ -0.29
Lmx1a-201ENSMUST00000028003 Csrnp3P59055 597 aa13.26□□□□□ -0.29
Lmx1a-201ENSMUST00000028003 TnnQ80Z71 1560 aa13.25□□□□□ -0.29
Lmx1a-201ENSMUST00000028003 Cep164Q5DU05 1446 aa13.24□□□□□ -0.29
Lmx1a-201ENSMUST00000028003 Bcl11aQ9QYE3 773 aa13.23□□□□□ -0.29
Lmx1a-201ENSMUST00000028003 Eif4g3Q80XI3 1579 aaKnown RBP13.22□□□□□ -0.29
Lmx1a-201ENSMUST00000028003 Top2bQ64511 1612 aa13.21□□□□□ -0.3
Lmx1a-201ENSMUST00000028003 Npm1Q61937 292 aaKnown RBP13.18□□□□□ -0.3
Lmx1a-201ENSMUST00000028003 Golga3P55937 1487 aa13.18□□□□□ -0.3
Lmx1a-201ENSMUST00000028003 Ccdc18Q640L5 1455 aa13.17□□□□□ -0.3
Lmx1a-201ENSMUST00000028003 Anks4bQ8K3X6 423 aa13.16□□□□□ -0.3
Lmx1a-201ENSMUST00000028003 Zeb1Q64318 1117 aa13.15□□□□□ -0.3
Lmx1a-201ENSMUST00000028003 Shroom2A2ALU4 1481 aa13.14□□□□□ -0.31
Lmx1a-201ENSMUST00000028003 Dnajc5P60904 198 aa13.13□□□□□ -0.31
Lmx1a-201ENSMUST00000028003 Camsap1A2AHC3 1581 aa13.1□□□□□ -0.31
Lmx1a-201ENSMUST00000028003 Fmn1Q05860 1466 aa13.09□□□□□ -0.31
Lmx1a-201ENSMUST00000028003 LrpprcQ6PB66 1392 aaKnown RBP13.08□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 Aplp2Q06335 707 aa13.08□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 Dhx29Q6PGC1 1365 aaKnown RBP13.07□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 Cngb1E1AZ71 1325 aa13.07□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 Urb2E9Q7L1 1524 aaKnown RBP13.07□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 Crocc2F6XLV1 1638 aa13.05□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 Ift140E9PY46 1464 aa13.05□□□□□ -0.32
Lmx1a-201ENSMUST00000028003 PogzQ8BZH4 1409 aaKnown RBP13.02□□□□□ -0.33
Lmx1a-201ENSMUST00000028003 Plb1Q3TTY0 1478 aa13.02□□□□□ -0.33
Lmx1a-201ENSMUST00000028003 Amer1Q7TS75 1132 aa13.01□□□□□ -0.33
Lmx1a-201ENSMUST00000028003 Rusc2Q80U22 1514 aa12.97□□□□□ -0.33
Lmx1a-201ENSMUST00000028003 Pbrm1Q8BSQ9 1634 aaKnown RBP12.97□□□□□ -0.33
Lmx1a-201ENSMUST00000028003 Grin2bQ01097 1482 aa12.92□□□□□ -0.34
Lmx1a-201ENSMUST00000028003 Duox2A2AQ99 1517 aa12.92□□□□□ -0.34
Lmx1a-201ENSMUST00000028003 Sall2Q9QX96 1004 aa12.91□□□□□ -0.34
Lmx1a-201ENSMUST00000028003 Gm38655A0A286YDK6 273 aa12.91□□□□□ -0.34
Lmx1a-201ENSMUST00000028003 Efcab5A0JP43 1406 aa12.91□□□□□ -0.34
Lmx1a-201ENSMUST00000028003 PrkcshO08795 521 aa12.91□□□□□ -0.34
Lmx1a-201ENSMUST00000028003 CatipB9EKE5 520 aa12.89□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Gpatch8A2A6A1 1505 aa12.88□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 HrcG5E8J6 738 aa12.88□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Cc2d2bA0A286YDU8 1405 aa12.88□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Zcchc11B2RX14 1644 aaKnown RBP12.87□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Col17a1Q07563 1470 aa12.87□□□□□ -0.35
Lmx1a-201ENSMUST00000028003 Nup160Q9Z0W3 1402 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 75.1 ms