RNA–Protein interactions for RNA: ENSMUST00000026607.14

Chm-201, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chm, Length 4,868 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-201ENSMUST00000026607 NischQ80TM9 1593 aa14.46□□□□□ -0.09
Chm-201ENSMUST00000026607 Rhox8Q6VSS7 320 aa14.11□□□□□ -0.15
Chm-201ENSMUST00000026607 Abcc9P70170 1546 aa13.9□□□□□ -0.18
Chm-201ENSMUST00000026607 Gm35339A0A140LHH9 1649 aa13.81□□□□□ -0.2
Chm-201ENSMUST00000026607 Abcc8B2RUS7 1588 aa13.61□□□□□ -0.23
Chm-201ENSMUST00000026607 Rtl1Q7M732 1744 aa13.17□□□□□ -0.3
Chm-201ENSMUST00000026607 Ccdc180J3QNE4 1664 aa13.05□□□□□ -0.32
Chm-201ENSMUST00000026607 Ccdc136Q3TVA9 1136 aa12.95□□□□□ -0.34
Chm-201ENSMUST00000026607 Rpgrip1Q9EPQ2 1331 aa12.69□□□□□ -0.38
Chm-201ENSMUST00000026607 Rb1cc1Q9ESK9 1588 aa12.68□□□□□ -0.38
Chm-201ENSMUST00000026607 Trim41Q5NCC3 630 aa12.66□□□□□ -0.38
Chm-201ENSMUST00000026607 Dcaf1Q80TR8 1506 aa12.64□□□□□ -0.39
Chm-201ENSMUST00000026607 Ehmt2Q9Z148 1263 aaKnown RBP12.64□□□□□ -0.39
Chm-201ENSMUST00000026607 HrcG5E8J6 738 aa12.62□□□□□ -0.39
Chm-201ENSMUST00000026607 Zcchc6Q5BLK4 1491 aaKnown RBP12.59□□□□□ -0.39
Chm-201ENSMUST00000026607 ScribQ80U72 1612 aa12.54□□□□□ -0.4
Chm-201ENSMUST00000026607 Kdm5dQ62240 1548 aa12.51□□□□□ -0.41
Chm-201ENSMUST00000026607 Baz1aO88379 1555 aa12.49□□□□□ -0.41
Chm-201ENSMUST00000026607 NacadQ5SWP3 1504 aa12.49□□□□□ -0.41
Chm-201ENSMUST00000026607 Cngb1E1AZ71 1325 aa12.49□□□□□ -0.41
Chm-201ENSMUST00000026607 Acin1Q9JIX8 1338 aaKnown RBP12.39□□□□□ -0.43
Chm-201ENSMUST00000026607 Esf1Q3V1V3 845 aaKnown RBP12.37□□□□□ -0.43
Chm-201ENSMUST00000026607 Gab3Q8BSM5 595 aa12.34□□□□□ -0.43
Chm-201ENSMUST00000026607 Crybg2B7ZCC2 1516 aa12.17□□□□□ -0.46
Chm-201ENSMUST00000026607 Brd4Q9ESU6 1400 aaKnown RBP12.16□□□□□ -0.46
Chm-201ENSMUST00000026607 Cep164Q5DU05 1446 aa12.15□□□□□ -0.46
Chm-201ENSMUST00000026607 Sycp2Q9CUU3 1500 aa12.14□□□□□ -0.47
Chm-201ENSMUST00000026607 Smarca2Q6DIC0 1577 aa12.12□□□□□ -0.47
Chm-201ENSMUST00000026607 Chic1Q8CBW7 227 aa12.07□□□□□ -0.48
Chm-201ENSMUST00000026607 Npm2Q80W85 207 aa11.97□□□□□ -0.49
Chm-201ENSMUST00000026607 Myt1lP97500 1187 aa11.96□□□□□ -0.49
Chm-201ENSMUST00000026607 Golga3P55937 1487 aa11.96□□□□□ -0.49
Chm-201ENSMUST00000026607 Rsf1E9PWW9 1441 aaKnown RBP11.94□□□□□ -0.5
Chm-201ENSMUST00000026607 Cecr2E9Q2Z1 1453 aa11.94□□□□□ -0.5
Chm-201ENSMUST00000026607 Zeb1Q64318 1117 aa11.91□□□□□ -0.5
Chm-201ENSMUST00000026607 NefmP08553 848 aa11.86□□□□□ -0.51
Chm-201ENSMUST00000026607 Pcgf6Q99NA9 353 aa11.86□□□□□ -0.51
Chm-201ENSMUST00000026607 UbtfP25976 765 aaKnown RBP11.85□□□□□ -0.51
Chm-201ENSMUST00000026607 Ccdc88bQ4QRL3 1481 aa11.84□□□□□ -0.51
Chm-201ENSMUST00000026607 Synj1Q8CHC4 1574 aa11.83□□□□□ -0.52
Chm-201ENSMUST00000026607 CftrP26361 1476 aa11.81□□□□□ -0.52
Chm-201ENSMUST00000026607 Mier1Q5UAK0 511 aa11.78□□□□□ -0.52
Chm-201ENSMUST00000026607 Las1lA2BE28 776 aaKnown RBP11.76□□□□□ -0.53
Chm-201ENSMUST00000026607 Il27Q8K3I6 234 aa11.75□□□□□ -0.53
Chm-201ENSMUST00000026607 BicraF8VPZ9 1578 aa11.73□□□□□ -0.53
Chm-201ENSMUST00000026607 Supt5hO55201 1082 aaKnown RBP11.72□□□□□ -0.53
Chm-201ENSMUST00000026607 Wdr66E9Q743 1299 aa11.71□□□□□ -0.53
Chm-201ENSMUST00000026607 Cttnbp2B9EJA2 1648 aa11.67□□□□□ -0.54
Chm-201ENSMUST00000026607 Smarca4Q3TKT4 1613 aaKnown RBP11.67□□□□□ -0.54
Chm-201ENSMUST00000026607 Fmn1Q05860 1466 aa11.62□□□□□ -0.55
Chm-201ENSMUST00000026607 Ap3b1Q9Z1T1 1105 aa11.58□□□□□ -0.56
Chm-201ENSMUST00000026607 Plekhg3Q4VAC9 1341 aa11.57□□□□□ -0.56
Chm-201ENSMUST00000026607 Clip1Q922J3 1391 aa11.56□□□□□ -0.56
Chm-201ENSMUST00000026607 Pds5bQ4VA53 1446 aaKnown RBP11.56□□□□□ -0.56
Chm-201ENSMUST00000026607 Atad2bE9Q166 1460 aaKnown RBP11.53□□□□□ -0.56
Chm-201ENSMUST00000026607 Top2bQ64511 1612 aa11.52□□□□□ -0.57
Chm-201ENSMUST00000026607 Iqgap2Q3UQ44 1575 aa11.52□□□□□ -0.57
Chm-201ENSMUST00000026607 Cep162Q6ZQ06 1403 aa11.51□□□□□ -0.57
Chm-201ENSMUST00000026607 Cc2d2aQ8CFW7 1633 aa11.51□□□□□ -0.57
Chm-201ENSMUST00000026607 Rapgef2Q8CHG7 1496 aa11.49□□□□□ -0.57
Chm-201ENSMUST00000026607 Kif15Q6P9L6 1387 aa11.48□□□□□ -0.57
Chm-201ENSMUST00000026607 Npm1Q61937 292 aaKnown RBP11.46□□□□□ -0.57
Chm-201ENSMUST00000026607 Ercc6F8VPZ5 1481 aa11.45□□□□□ -0.58
Chm-201ENSMUST00000026607 TonslQ6NZL6 1363 aa11.45□□□□□ -0.58
Chm-201ENSMUST00000026607 Sall2Q9QX96 1004 aa11.43□□□□□ -0.58
Chm-201ENSMUST00000026607 Top2aQ01320 1528 aaKnown RBP11.43□□□□□ -0.58
Chm-201ENSMUST00000026607 Ube2uB1AUC4 352 aa11.4□□□□□ -0.59
Chm-201ENSMUST00000026607 Ubl4bQ9CQ84 188 aa11.39□□□□□ -0.59
Chm-201ENSMUST00000026607 Ppargc1bQ8VHJ7 1014 aa11.39□□□□□ -0.59
Chm-201ENSMUST00000026607 Fam50aQ9WV03 339 aaKnown RBP11.37□□□□□ -0.59
Chm-201ENSMUST00000026607 Setd5Q5XJV7 1441 aa11.37□□□□□ -0.59
Chm-201ENSMUST00000026607 Eea1Q8BL66 1411 aa11.35□□□□□ -0.59
Chm-201ENSMUST00000026607 Ccdc18Q640L5 1455 aa11.35□□□□□ -0.59
Chm-201ENSMUST00000026607 Lmod2Q3UHZ5 550 aa11.34□□□□□ -0.59
Chm-201ENSMUST00000026607 ClspnQ80YR7 1315 aa11.34□□□□□ -0.59
Chm-201ENSMUST00000026607 Cdk11bP24788 784 aaKnown RBP11.32□□□□□ -0.6
Chm-201ENSMUST00000026607 Neurod1Q60867 357 aa11.31□□□□□ -0.6
Chm-201ENSMUST00000026607 Nop58Q6DFW4 536 aaKnown RBP11.3□□□□□ -0.6
Chm-201ENSMUST00000026607 Eid3Q3V124 375 aa11.29□□□□□ -0.6
Chm-201ENSMUST00000026607 Frmpd1A2AKB4 1549 aa11.28□□□□□ -0.6
Chm-201ENSMUST00000026607 Aebp2Q9Z248 504 aaKnown RBP11.28□□□□□ -0.6
Chm-201ENSMUST00000026607 BlmO88700 1416 aa11.28□□□□□ -0.6
Chm-201ENSMUST00000026607 Wdr62Q3U3T8 1523 aa11.22□□□□□ -0.61
Chm-201ENSMUST00000026607 Arhgap35Q91YM2 1499 aa11.22□□□□□ -0.61
Chm-201ENSMUST00000026607 Phldb1Q6PDH0 1371 aaKnown RBP11.21□□□□□ -0.61
Chm-201ENSMUST00000026607 NclP09405 707 aaKnown RBP11.21□□□□□ -0.61
Chm-201ENSMUST00000026607 Cux2P70298 1426 aa11.21□□□□□ -0.62
Chm-201ENSMUST00000026607 PtprkP35822 1457 aa11.2□□□□□ -0.62
Chm-201ENSMUST00000026607 Baz1bQ9Z277 1479 aa11.19□□□□□ -0.62
Chm-201ENSMUST00000026607 Shroom4Q1W617 1475 aa11.19□□□□□ -0.62
Chm-201ENSMUST00000026607 Lamc3Q9R0B6 1581 aa11.16□□□□□ -0.62
Chm-201ENSMUST00000026607 NrkQ9R0G8 1455 aa11.15□□□□□ -0.62
Chm-201ENSMUST00000026607 TnnQ80Z71 1560 aa11.13□□□□□ -0.63
Chm-201ENSMUST00000026607 Anks4bQ8K3X6 423 aa11.12□□□□□ -0.63
Chm-201ENSMUST00000026607 Arap1Q4LDD4 1452 aa11.12□□□□□ -0.63
Chm-201ENSMUST00000026607 Camsap1A2AHC3 1581 aa11.12□□□□□ -0.63
Chm-201ENSMUST00000026607 LrpprcQ6PB66 1392 aaKnown RBP11.11□□□□□ -0.63
Chm-201ENSMUST00000026607 Grin2bQ01097 1482 aa11.11□□□□□ -0.63
Chm-201ENSMUST00000026607 Map3k1P53349 1493 aa11.1□□□□□ -0.63
Chm-201ENSMUST00000026607 Carmil1Q6EDY6 1374 aa11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms