RNA–Protein interactions for RNA: ENSMUST00000023452.13

Ccdc116-201, Transcript of Coiled-coil domain-containing protein 116, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc116, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116-201ENSMUST00000023452 Rhox8Q6VSS7 320 aa16.59■□□□□ 0.25
Ccdc116-201ENSMUST00000023452 NischQ80TM9 1593 aa15.94■□□□□ 0.14
Ccdc116-201ENSMUST00000023452 Ehmt2Q9Z148 1263 aaKnown RBP15.28■□□□□ 0.04
Ccdc116-201ENSMUST00000023452 Ccdc136Q3TVA9 1136 aa15.19■□□□□ 0.02
Ccdc116-201ENSMUST00000023452 Abcc9P70170 1546 aa15.12■□□□□ 0.01
Ccdc116-201ENSMUST00000023452 Abcc8B2RUS7 1588 aa14.84□□□□□ -0.03
Ccdc116-201ENSMUST00000023452 Trim41Q5NCC3 630 aa14.63□□□□□ -0.07
Ccdc116-201ENSMUST00000023452 Cngb1E1AZ71 1325 aa14.63□□□□□ -0.07
Ccdc116-201ENSMUST00000023452 Gab3Q8BSM5 595 aa14.62□□□□□ -0.07
Ccdc116-201ENSMUST00000023452 Gm35339A0A140LHH9 1649 aa14.58□□□□□ -0.08
Ccdc116-201ENSMUST00000023452 Rpgrip1Q9EPQ2 1331 aa14.56□□□□□ -0.08
Ccdc116-201ENSMUST00000023452 Ccdc180J3QNE4 1664 aa14.45□□□□□ -0.1
Ccdc116-201ENSMUST00000023452 Esf1Q3V1V3 845 aaKnown RBP14.44□□□□□ -0.1
Ccdc116-201ENSMUST00000023452 Rtl1Q7M732 1744 aa14.32□□□□□ -0.12
Ccdc116-201ENSMUST00000023452 Acin1Q9JIX8 1338 aaKnown RBP14.32□□□□□ -0.12
Ccdc116-201ENSMUST00000023452 Zcchc6Q5BLK4 1491 aaKnown RBP14.28□□□□□ -0.12
Ccdc116-201ENSMUST00000023452 Zeb1Q64318 1117 aa14.25□□□□□ -0.13
Ccdc116-201ENSMUST00000023452 HrcG5E8J6 738 aa14.25□□□□□ -0.13
Ccdc116-201ENSMUST00000023452 Myt1lP97500 1187 aa14.15□□□□□ -0.14
Ccdc116-201ENSMUST00000023452 Npm2Q80W85 207 aa14.01□□□□□ -0.17
Ccdc116-201ENSMUST00000023452 Wdr66E9Q743 1299 aa14.01□□□□□ -0.17
Ccdc116-201ENSMUST00000023452 UbtfP25976 765 aaKnown RBP14□□□□□ -0.17
Ccdc116-201ENSMUST00000023452 Rb1cc1Q9ESK9 1588 aa13.99□□□□□ -0.17
Ccdc116-201ENSMUST00000023452 Pcgf6Q99NA9 353 aa13.95□□□□□ -0.18
Ccdc116-201ENSMUST00000023452 Dcaf1Q80TR8 1506 aa13.91□□□□□ -0.18
Ccdc116-201ENSMUST00000023452 Chic1Q8CBW7 227 aa13.91□□□□□ -0.18
Ccdc116-201ENSMUST00000023452 Supt5hO55201 1082 aaKnown RBP13.84□□□□□ -0.19
Ccdc116-201ENSMUST00000023452 Il27Q8K3I6 234 aa13.83□□□□□ -0.19
Ccdc116-201ENSMUST00000023452 Ppargc1bQ8VHJ7 1014 aa13.83□□□□□ -0.2
Ccdc116-201ENSMUST00000023452 Las1lA2BE28 776 aaKnown RBP13.8□□□□□ -0.2
Ccdc116-201ENSMUST00000023452 Mier1Q5UAK0 511 aa13.72□□□□□ -0.21
Ccdc116-201ENSMUST00000023452 Kdm5dQ62240 1548 aa13.7□□□□□ -0.22
Ccdc116-201ENSMUST00000023452 Ap3b1Q9Z1T1 1105 aa13.69□□□□□ -0.22
Ccdc116-201ENSMUST00000023452 NefmP08553 848 aa13.68□□□□□ -0.22
Ccdc116-201ENSMUST00000023452 Baz1aO88379 1555 aa13.67□□□□□ -0.22
Ccdc116-201ENSMUST00000023452 NacadQ5SWP3 1504 aa13.64□□□□□ -0.23
Ccdc116-201ENSMUST00000023452 Ube2uB1AUC4 352 aa13.62□□□□□ -0.23
Ccdc116-201ENSMUST00000023452 Cep164Q5DU05 1446 aa13.61□□□□□ -0.23
Ccdc116-201ENSMUST00000023452 ScribQ80U72 1612 aa13.59□□□□□ -0.23
Ccdc116-201ENSMUST00000023452 Plekhg3Q4VAC9 1341 aa13.55□□□□□ -0.24
Ccdc116-201ENSMUST00000023452 Brd4Q9ESU6 1400 aaKnown RBP13.53□□□□□ -0.24
Ccdc116-201ENSMUST00000023452 Rsf1E9PWW9 1441 aaKnown RBP13.49□□□□□ -0.25
Ccdc116-201ENSMUST00000023452 Sall2Q9QX96 1004 aa13.42□□□□□ -0.26
Ccdc116-201ENSMUST00000023452 Fam50aQ9WV03 339 aaKnown RBP13.41□□□□□ -0.26
Ccdc116-201ENSMUST00000023452 Ccdc88bQ4QRL3 1481 aa13.37□□□□□ -0.27
Ccdc116-201ENSMUST00000023452 Eid3Q3V124 375 aa13.36□□□□□ -0.27
Ccdc116-201ENSMUST00000023452 Neurod1Q60867 357 aa13.36□□□□□ -0.27
Ccdc116-201ENSMUST00000023452 Lmod2Q3UHZ5 550 aa13.36□□□□□ -0.27
Ccdc116-201ENSMUST00000023452 Golga3P55937 1487 aa13.33□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 Cecr2E9Q2Z1 1453 aa13.31□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 Slc24a1Q91WD8 1130 aa13.31□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 TonslQ6NZL6 1363 aa13.31□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 Mapk8ip2Q9ERE9 830 aa13.31□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 Cdk11bP24788 784 aaKnown RBP13.3□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 Nop58Q6DFW4 536 aaKnown RBP13.3□□□□□ -0.28
Ccdc116-201ENSMUST00000023452 Clip1Q922J3 1391 aa13.25□□□□□ -0.29
Ccdc116-201ENSMUST00000023452 Sycp2Q9CUU3 1500 aa13.23□□□□□ -0.29
Ccdc116-201ENSMUST00000023452 Aebp2Q9Z248 504 aaKnown RBP13.22□□□□□ -0.29
Ccdc116-201ENSMUST00000023452 NclP09405 707 aaKnown RBP13.2□□□□□ -0.3
Ccdc116-201ENSMUST00000023452 Smarca2Q6DIC0 1577 aa13.19□□□□□ -0.3
Ccdc116-201ENSMUST00000023452 Gm38655A0A286YDK6 273 aa13.17□□□□□ -0.3
Ccdc116-201ENSMUST00000023452 Npm1Q61937 292 aaKnown RBP13.16□□□□□ -0.3
Ccdc116-201ENSMUST00000023452 ClspnQ80YR7 1315 aa13.11□□□□□ -0.31
Ccdc116-201ENSMUST00000023452 Synj1Q8CHC4 1574 aa13.08□□□□□ -0.32
Ccdc116-201ENSMUST00000023452 Csrnp3P59055 597 aa13.07□□□□□ -0.32
Ccdc116-201ENSMUST00000023452 CftrP26361 1476 aa13.06□□□□□ -0.32
Ccdc116-201ENSMUST00000023452 Crybg2B7ZCC2 1516 aa13.05□□□□□ -0.32
Ccdc116-201ENSMUST00000023452 Ubl4bQ9CQ84 188 aa13.02□□□□□ -0.32
Ccdc116-201ENSMUST00000023452 CenpbP27790 599 aa13□□□□□ -0.33
Ccdc116-201ENSMUST00000023452 Kif15Q6P9L6 1387 aa12.99□□□□□ -0.33
Ccdc116-201ENSMUST00000023452 Zbtb7cQ8VCZ7 619 aa12.99□□□□□ -0.33
Ccdc116-201ENSMUST00000023452 Setd5Q5XJV7 1441 aa12.97□□□□□ -0.33
Ccdc116-201ENSMUST00000023452 Chic2Q9D9G3 165 aa12.96□□□□□ -0.34
Ccdc116-201ENSMUST00000023452 BlmO88700 1416 aa12.96□□□□□ -0.34
Ccdc116-201ENSMUST00000023452 Eif5bQ05D44 1216 aaKnown RBP12.95□□□□□ -0.34
Ccdc116-201ENSMUST00000023452 Cep162Q6ZQ06 1403 aa12.94□□□□□ -0.34
Ccdc116-201ENSMUST00000023452 Anks4bQ8K3X6 423 aa12.9□□□□□ -0.34
Ccdc116-201ENSMUST00000023452 Rapgef2Q8CHG7 1496 aa12.89□□□□□ -0.35
Ccdc116-201ENSMUST00000023452 Zbtb4Q5F293 982 aa12.88□□□□□ -0.35
Ccdc116-201ENSMUST00000023452 Fkbp15Q6P9Q6 1216 aaKnown RBP12.88□□□□□ -0.35
Ccdc116-201ENSMUST00000023452 Fmn1Q05860 1466 aa12.85□□□□□ -0.35
Ccdc116-201ENSMUST00000023452 Stra8P70278 393 aa12.83□□□□□ -0.36
Ccdc116-201ENSMUST00000023452 Eea1Q8BL66 1411 aa12.82□□□□□ -0.36
Ccdc116-201ENSMUST00000023452 1700123L14RikQ3V2K7 440 aa12.78□□□□□ -0.36
Ccdc116-201ENSMUST00000023452 Ifnlr1Q8CGK5 535 aa12.78□□□□□ -0.36
Ccdc116-201ENSMUST00000023452 NrdcQ8BHG1 1161 aa12.76□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 Smarca4Q3TKT4 1613 aaKnown RBP12.75□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 BicraF8VPZ9 1578 aa12.74□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 Cc2d2aQ8CFW7 1633 aa12.74□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 Tnnt3Q9QZ47 272 aa12.72□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 Hspa5P20029 655 aaKnown RBP12.72□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 Cttnbp2B9EJA2 1648 aa12.72□□□□□ -0.37
Ccdc116-201ENSMUST00000023452 Hnrnpul2Q00PI9 745 aaKnown RBP12.71□□□□□ -0.38
Ccdc116-201ENSMUST00000023452 Pds5bQ4VA53 1446 aaKnown RBP12.7□□□□□ -0.38
Ccdc116-201ENSMUST00000023452 Ercc6F8VPZ5 1481 aa12.7□□□□□ -0.38
Ccdc116-201ENSMUST00000023452 Ccdc18Q640L5 1455 aa12.69□□□□□ -0.38
Ccdc116-201ENSMUST00000023452 SafbD3YXK2 937 aaKnown RBP12.65□□□□□ -0.38
Ccdc116-201ENSMUST00000023452 Atad2bE9Q166 1460 aaKnown RBP12.64□□□□□ -0.39
Ccdc116-201ENSMUST00000023452 Iqgap2Q3UQ44 1575 aa12.64□□□□□ -0.39
Ccdc116-201ENSMUST00000023452 Sin3aQ60520 1274 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms