RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 NischQ80TM9 1593 aa21.29■■□□□ 1
Ercc4-201ENSMUST00000023206 Rhox8Q6VSS7 320 aa21.1■□□□□ 0.97
Ercc4-201ENSMUST00000023206 Gm35339A0A140LHH9 1649 aa20.57■□□□□ 0.88
Ercc4-201ENSMUST00000023206 Abcc9P70170 1546 aa20.57■□□□□ 0.88
Ercc4-201ENSMUST00000023206 Ehmt2Q9Z148 1263 aaKnown RBP20.46■□□□□ 0.87
Ercc4-201ENSMUST00000023206 Abcc8B2RUS7 1588 aa20.15■□□□□ 0.82
Ercc4-201ENSMUST00000023206 Rpgrip1Q9EPQ2 1331 aa20.12■□□□□ 0.81
Ercc4-201ENSMUST00000023206 Pcgf6Q99NA9 353 aa19.79■□□□□ 0.76
Ercc4-201ENSMUST00000023206 Acin1Q9JIX8 1338 aaKnown RBP19.75■□□□□ 0.75
Ercc4-201ENSMUST00000023206 Rtl1Q7M732 1744 aa19.56■□□□□ 0.72
Ercc4-201ENSMUST00000023206 Ccdc180J3QNE4 1664 aa19.55■□□□□ 0.72
Ercc4-201ENSMUST00000023206 Ccdc136Q3TVA9 1136 aa19.5■□□□□ 0.71
Ercc4-201ENSMUST00000023206 Supt5hO55201 1082 aaKnown RBP19.36■□□□□ 0.69
Ercc4-201ENSMUST00000023206 Neurod1Q60867 357 aa19.2■□□□□ 0.66
Ercc4-201ENSMUST00000023206 Zeb1Q64318 1117 aa19.13■□□□□ 0.65
Ercc4-201ENSMUST00000023206 Zcchc6Q5BLK4 1491 aaKnown RBP18.97■□□□□ 0.63
Ercc4-201ENSMUST00000023206 Trim41Q5NCC3 630 aa18.96■□□□□ 0.63
Ercc4-201ENSMUST00000023206 HrcG5E8J6 738 aa18.84■□□□□ 0.61
Ercc4-201ENSMUST00000023206 Las1lA2BE28 776 aaKnown RBP18.8■□□□□ 0.6
Ercc4-201ENSMUST00000023206 ScribQ80U72 1612 aa18.75■□□□□ 0.59
Ercc4-201ENSMUST00000023206 Gab3Q8BSM5 595 aa18.73■□□□□ 0.59
Ercc4-201ENSMUST00000023206 Cngb1E1AZ71 1325 aa18.73■□□□□ 0.59
Ercc4-201ENSMUST00000023206 Csrnp3P59055 597 aa18.73■□□□□ 0.59
Ercc4-201ENSMUST00000023206 Gm38655A0A286YDK6 273 aa18.72■□□□□ 0.59
Ercc4-201ENSMUST00000023206 1700123L14RikQ3V2K7 440 aa18.7■□□□□ 0.58
Ercc4-201ENSMUST00000023206 Rb1cc1Q9ESK9 1588 aa18.65■□□□□ 0.58
Ercc4-201ENSMUST00000023206 Ppargc1bQ8VHJ7 1014 aa18.64■□□□□ 0.57
Ercc4-201ENSMUST00000023206 Dcaf1Q80TR8 1506 aa18.6■□□□□ 0.57
Ercc4-201ENSMUST00000023206 Sall2Q9QX96 1004 aa18.5■□□□□ 0.55
Ercc4-201ENSMUST00000023206 Wdr66E9Q743 1299 aa18.5■□□□□ 0.55
Ercc4-201ENSMUST00000023206 Kdm5dQ62240 1548 aa18.46■□□□□ 0.55
Ercc4-201ENSMUST00000023206 CenpbP27790 599 aa18.43■□□□□ 0.54
Ercc4-201ENSMUST00000023206 Baz1aO88379 1555 aa18.37■□□□□ 0.53
Ercc4-201ENSMUST00000023206 Chic1Q8CBW7 227 aa18.28■□□□□ 0.52
Ercc4-201ENSMUST00000023206 NacadQ5SWP3 1504 aa18.24■□□□□ 0.51
Ercc4-201ENSMUST00000023206 DiexfQ8BTT6 772 aaKnown RBP18.24■□□□□ 0.51
Ercc4-201ENSMUST00000023206 Anks4bQ8K3X6 423 aa18.21■□□□□ 0.51
Ercc4-201ENSMUST00000023206 Mier1Q5UAK0 511 aa18.17■□□□□ 0.5
Ercc4-201ENSMUST00000023206 Esf1Q3V1V3 845 aaKnown RBP18.17■□□□□ 0.5
Ercc4-201ENSMUST00000023206 Cep164Q5DU05 1446 aa18.14■□□□□ 0.5
Ercc4-201ENSMUST00000023206 Cdk11bP24788 784 aaKnown RBP18.11■□□□□ 0.49
Ercc4-201ENSMUST00000023206 Nop58Q6DFW4 536 aaKnown RBP18.08■□□□□ 0.49
Ercc4-201ENSMUST00000023206 UbtfP25976 765 aaKnown RBP18.07■□□□□ 0.48
Ercc4-201ENSMUST00000023206 NefmP08553 848 aa18.04■□□□□ 0.48
Ercc4-201ENSMUST00000023206 Aebp2Q9Z248 504 aaKnown RBP18.04■□□□□ 0.48
Ercc4-201ENSMUST00000023206 Mapk8ip2Q9ERE9 830 aa18.01■□□□□ 0.47
Ercc4-201ENSMUST00000023206 Rsf1E9PWW9 1441 aaKnown RBP17.98■□□□□ 0.47
Ercc4-201ENSMUST00000023206 Myt1lP97500 1187 aa17.97■□□□□ 0.47
Ercc4-201ENSMUST00000023206 Bcl11aQ9QYE3 773 aa17.96■□□□□ 0.47
Ercc4-201ENSMUST00000023206 Smarca2Q6DIC0 1577 aa17.95■□□□□ 0.46
Ercc4-201ENSMUST00000023206 Aplp2Q06335 707 aa17.93■□□□□ 0.46
Ercc4-201ENSMUST00000023206 Myt1Q8CFC2 1127 aa17.89■□□□□ 0.45
Ercc4-201ENSMUST00000023206 Crybg2B7ZCC2 1516 aa17.87■□□□□ 0.45
Ercc4-201ENSMUST00000023206 Sycp2Q9CUU3 1500 aa17.86■□□□□ 0.45
Ercc4-201ENSMUST00000023206 Fam71e1A1L3C1 212 aa17.84■□□□□ 0.45
Ercc4-201ENSMUST00000023206 SafbD3YXK2 937 aaKnown RBP17.83■□□□□ 0.44
Ercc4-201ENSMUST00000023206 Ccdc88bQ4QRL3 1481 aa17.83■□□□□ 0.44
Ercc4-201ENSMUST00000023206 Ifnlr1Q8CGK5 535 aa17.77■□□□□ 0.44
Ercc4-201ENSMUST00000023206 PrkcshO08795 521 aa17.74■□□□□ 0.43
Ercc4-201ENSMUST00000023206 Cecr2E9Q2Z1 1453 aa17.73■□□□□ 0.43
Ercc4-201ENSMUST00000023206 Ap3b1Q9Z1T1 1105 aa17.71■□□□□ 0.43
Ercc4-201ENSMUST00000023206 Npm2Q80W85 207 aa17.69■□□□□ 0.42
Ercc4-201ENSMUST00000023206 Brd4Q9ESU6 1400 aaKnown RBP17.67■□□□□ 0.42
Ercc4-201ENSMUST00000023206 Ttbk1Q6PCN3 1308 aa17.67■□□□□ 0.42
Ercc4-201ENSMUST00000023206 ClspnQ80YR7 1315 aa17.63■□□□□ 0.41
Ercc4-201ENSMUST00000023206 Hnrnpul2Q00PI9 745 aaKnown RBP17.61■□□□□ 0.41
Ercc4-201ENSMUST00000023206 Golga3P55937 1487 aa17.6■□□□□ 0.41
Ercc4-201ENSMUST00000023206 Plekhg3Q4VAC9 1341 aa17.57■□□□□ 0.4
Ercc4-201ENSMUST00000023206 Synj1Q8CHC4 1574 aa17.5■□□□□ 0.39
Ercc4-201ENSMUST00000023206 BicraF8VPZ9 1578 aa17.49■□□□□ 0.39
Ercc4-201ENSMUST00000023206 TonslQ6NZL6 1363 aa17.42■□□□□ 0.38
Ercc4-201ENSMUST00000023206 Eid3Q3V124 375 aa17.4■□□□□ 0.38
Ercc4-201ENSMUST00000023206 Slc24a1Q91WD8 1130 aa17.4■□□□□ 0.38
Ercc4-201ENSMUST00000023206 Il27Q8K3I6 234 aa17.38■□□□□ 0.37
Ercc4-201ENSMUST00000023206 CftrP26361 1476 aa17.38■□□□□ 0.37
Ercc4-201ENSMUST00000023206 Clip1Q922J3 1391 aa17.24■□□□□ 0.35
Ercc4-201ENSMUST00000023206 Amer1Q7TS75 1132 aa17.23■□□□□ 0.35
Ercc4-201ENSMUST00000023206 Cc2d2aQ8CFW7 1633 aa17.17■□□□□ 0.34
Ercc4-201ENSMUST00000023206 Anp32aO35381 247 aa17.17■□□□□ 0.34
Ercc4-201ENSMUST00000023206 Tnnt3Q9QZ47 272 aa17.17■□□□□ 0.34
Ercc4-201ENSMUST00000023206 Rapgef2Q8CHG7 1496 aa17.14■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Top2bQ64511 1612 aa17.13■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Cttnbp2B9EJA2 1648 aa17.13■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Cep162Q6ZQ06 1403 aa17.13■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Fam50aQ9WV03 339 aaKnown RBP17.12■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Nolc1E9Q5C9 702 aaKnown RBP17.12■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Eif5bQ05D44 1216 aaKnown RBP17.12■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Smarca4Q3TKT4 1613 aaKnown RBP17.09■□□□□ 0.33
Ercc4-201ENSMUST00000023206 Lmod2Q3UHZ5 550 aa17.05■□□□□ 0.32
Ercc4-201ENSMUST00000023206 Ube2uB1AUC4 352 aa17.03■□□□□ 0.32
Ercc4-201ENSMUST00000023206 Pelp1Q9DBD5 1123 aaKnown RBP17.01■□□□□ 0.31
Ercc4-201ENSMUST00000023206 NclP09405 707 aaKnown RBP17■□□□□ 0.31
Ercc4-201ENSMUST00000023206 Calr4Q3TQS0 420 aa16.99■□□□□ 0.31
Ercc4-201ENSMUST00000023206 Ppp4r2Q0VGB7 417 aa16.98■□□□□ 0.31
Ercc4-201ENSMUST00000023206 Fmn1Q05860 1466 aa16.97■□□□□ 0.31
Ercc4-201ENSMUST00000023206 Hdac5Q9Z2V6 1113 aa16.93■□□□□ 0.3
Ercc4-201ENSMUST00000023206 Supt16hQ920B9 1047 aa16.9■□□□□ 0.3
Ercc4-201ENSMUST00000023206 Iqgap2Q3UQ44 1575 aa16.89■□□□□ 0.3
Ercc4-201ENSMUST00000023206 Top2aQ01320 1528 aaKnown RBP16.87■□□□□ 0.29
Ercc4-201ENSMUST00000023206 P3h3Q8CG70 732 aa16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 91 ms