RNA–Protein interactions for RNA: ENSMUST00000022638.5

Nefm-201, Transcript of Neurofilament medium polypeptide, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Nefm, Length 3,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nefm-201ENSMUST00000022638 NischQ80TM9 1593 aa16.51■□□□□ 0.23
Nefm-201ENSMUST00000022638 Rhox8Q6VSS7 320 aa15.94■□□□□ 0.14
Nefm-201ENSMUST00000022638 Abcc9P70170 1546 aa15.93■□□□□ 0.14
Nefm-201ENSMUST00000022638 Gm35339A0A140LHH9 1649 aa15.82■□□□□ 0.12
Nefm-201ENSMUST00000022638 Abcc8B2RUS7 1588 aa15.58■□□□□ 0.09
Nefm-201ENSMUST00000022638 Ehmt2Q9Z148 1263 aaKnown RBP15.32■□□□□ 0.04
Nefm-201ENSMUST00000022638 Rtl1Q7M732 1744 aa15.06■□□□□ 0
Nefm-201ENSMUST00000022638 Ccdc180J3QNE4 1664 aa14.97□□□□□ -0.01
Nefm-201ENSMUST00000022638 Rpgrip1Q9EPQ2 1331 aa14.77□□□□□ -0.04
Nefm-201ENSMUST00000022638 Ccdc136Q3TVA9 1136 aa14.77□□□□□ -0.04
Nefm-201ENSMUST00000022638 ScribQ80U72 1612 aa14.72□□□□□ -0.05
Nefm-201ENSMUST00000022638 Zcchc6Q5BLK4 1491 aaKnown RBP14.65□□□□□ -0.06
Nefm-201ENSMUST00000022638 Acin1Q9JIX8 1338 aaKnown RBP14.55□□□□□ -0.08
Nefm-201ENSMUST00000022638 Rb1cc1Q9ESK9 1588 aa14.47□□□□□ -0.09
Nefm-201ENSMUST00000022638 Pcgf6Q99NA9 353 aa14.46□□□□□ -0.09
Nefm-201ENSMUST00000022638 HrcG5E8J6 738 aa14.46□□□□□ -0.1
Nefm-201ENSMUST00000022638 Kdm5dQ62240 1548 aa14.45□□□□□ -0.1
Nefm-201ENSMUST00000022638 Dcaf1Q80TR8 1506 aa14.4□□□□□ -0.1
Nefm-201ENSMUST00000022638 Trim41Q5NCC3 630 aa14.38□□□□□ -0.11
Nefm-201ENSMUST00000022638 NacadQ5SWP3 1504 aa14.29□□□□□ -0.12
Nefm-201ENSMUST00000022638 Zeb1Q64318 1117 aa14.25□□□□□ -0.13
Nefm-201ENSMUST00000022638 Baz1aO88379 1555 aa14.25□□□□□ -0.13
Nefm-201ENSMUST00000022638 Supt5hO55201 1082 aaKnown RBP14.24□□□□□ -0.13
Nefm-201ENSMUST00000022638 Gab3Q8BSM5 595 aa14.12□□□□□ -0.15
Nefm-201ENSMUST00000022638 Cngb1E1AZ71 1325 aa14.1□□□□□ -0.15
Nefm-201ENSMUST00000022638 Esf1Q3V1V3 845 aaKnown RBP14.04□□□□□ -0.16
Nefm-201ENSMUST00000022638 Sycp2Q9CUU3 1500 aa13.99□□□□□ -0.17
Nefm-201ENSMUST00000022638 Neurod1Q60867 357 aa13.98□□□□□ -0.17
Nefm-201ENSMUST00000022638 Ppargc1bQ8VHJ7 1014 aa13.95□□□□□ -0.18
Nefm-201ENSMUST00000022638 Chic1Q8CBW7 227 aa13.94□□□□□ -0.18
Nefm-201ENSMUST00000022638 Cep164Q5DU05 1446 aa13.93□□□□□ -0.18
Nefm-201ENSMUST00000022638 Smarca2Q6DIC0 1577 aa13.9□□□□□ -0.18
Nefm-201ENSMUST00000022638 Crybg2B7ZCC2 1516 aa13.84□□□□□ -0.19
Nefm-201ENSMUST00000022638 Wdr66E9Q743 1299 aa13.83□□□□□ -0.2
Nefm-201ENSMUST00000022638 Rsf1E9PWW9 1441 aaKnown RBP13.8□□□□□ -0.2
Nefm-201ENSMUST00000022638 Cecr2E9Q2Z1 1453 aa13.8□□□□□ -0.2
Nefm-201ENSMUST00000022638 BicraF8VPZ9 1578 aa13.79□□□□□ -0.2
Nefm-201ENSMUST00000022638 Dnajc5bQ9CQ94 199 aa13.74□□□□□ -0.21
Nefm-201ENSMUST00000022638 Brd4Q9ESU6 1400 aaKnown RBP13.74□□□□□ -0.21
Nefm-201ENSMUST00000022638 Gm38655A0A286YDK6 273 aa13.72□□□□□ -0.21
Nefm-201ENSMUST00000022638 Il27Q8K3I6 234 aa13.7□□□□□ -0.22
Nefm-201ENSMUST00000022638 Ccdc88bQ4QRL3 1481 aa13.7□□□□□ -0.22
Nefm-201ENSMUST00000022638 Sall2Q9QX96 1004 aa13.68□□□□□ -0.22
Nefm-201ENSMUST00000022638 Csrnp3P59055 597 aa13.65□□□□□ -0.22
Nefm-201ENSMUST00000022638 Las1lA2BE28 776 aaKnown RBP13.64□□□□□ -0.23
Nefm-201ENSMUST00000022638 UbtfP25976 765 aaKnown RBP13.64□□□□□ -0.23
Nefm-201ENSMUST00000022638 Mier1Q5UAK0 511 aa13.64□□□□□ -0.23
Nefm-201ENSMUST00000022638 Golga3P55937 1487 aa13.64□□□□□ -0.23
Nefm-201ENSMUST00000022638 NefmP08553 848 aa13.59□□□□□ -0.23
Nefm-201ENSMUST00000022638 Synj1Q8CHC4 1574 aa13.57□□□□□ -0.24
Nefm-201ENSMUST00000022638 Myt1lP97500 1187 aa13.56□□□□□ -0.24
Nefm-201ENSMUST00000022638 1700123L14RikQ3V2K7 440 aa13.53□□□□□ -0.24
Nefm-201ENSMUST00000022638 CftrP26361 1476 aa13.49□□□□□ -0.25
Nefm-201ENSMUST00000022638 Ubl4bQ9CQ84 188 aa13.44□□□□□ -0.26
Nefm-201ENSMUST00000022638 Aebp2Q9Z248 504 aaKnown RBP13.41□□□□□ -0.26
Nefm-201ENSMUST00000022638 Npm2Q80W85 207 aa13.41□□□□□ -0.26
Nefm-201ENSMUST00000022638 Nop58Q6DFW4 536 aaKnown RBP13.38□□□□□ -0.27
Nefm-201ENSMUST00000022638 Cdk11bP24788 784 aaKnown RBP13.38□□□□□ -0.27
Nefm-201ENSMUST00000022638 Pds5bQ4VA53 1446 aaKnown RBP13.36□□□□□ -0.27
Nefm-201ENSMUST00000022638 Anks4bQ8K3X6 423 aa13.29□□□□□ -0.28
Nefm-201ENSMUST00000022638 Atad2bE9Q166 1460 aaKnown RBP13.29□□□□□ -0.28
Nefm-201ENSMUST00000022638 Smarca4Q3TKT4 1613 aaKnown RBP13.29□□□□□ -0.28
Nefm-201ENSMUST00000022638 Mapk8ip2Q9ERE9 830 aa13.28□□□□□ -0.28
Nefm-201ENSMUST00000022638 Cttnbp2B9EJA2 1648 aa13.27□□□□□ -0.28
Nefm-201ENSMUST00000022638 Top2bQ64511 1612 aa13.27□□□□□ -0.28
Nefm-201ENSMUST00000022638 CenpbP27790 599 aa13.26□□□□□ -0.29
Nefm-201ENSMUST00000022638 Iqgap2Q3UQ44 1575 aa13.26□□□□□ -0.29
Nefm-201ENSMUST00000022638 Plekhg3Q4VAC9 1341 aa13.25□□□□□ -0.29
Nefm-201ENSMUST00000022638 Cc2d2aQ8CFW7 1633 aa13.25□□□□□ -0.29
Nefm-201ENSMUST00000022638 Ercc6F8VPZ5 1481 aa13.23□□□□□ -0.29
Nefm-201ENSMUST00000022638 Rapgef2Q8CHG7 1496 aa13.21□□□□□ -0.29
Nefm-201ENSMUST00000022638 Fmn1Q05860 1466 aa13.2□□□□□ -0.3
Nefm-201ENSMUST00000022638 Cep162Q6ZQ06 1403 aa13.2□□□□□ -0.3
Nefm-201ENSMUST00000022638 Kif15Q6P9L6 1387 aa13.2□□□□□ -0.3
Nefm-201ENSMUST00000022638 Npm1Q61937 292 aaKnown RBP13.19□□□□□ -0.3
Nefm-201ENSMUST00000022638 Ap3b1Q9Z1T1 1105 aa13.16□□□□□ -0.3
Nefm-201ENSMUST00000022638 Clip1Q922J3 1391 aa13.16□□□□□ -0.3
Nefm-201ENSMUST00000022638 TonslQ6NZL6 1363 aa13.15□□□□□ -0.3
Nefm-201ENSMUST00000022638 Frmpd1A2AKB4 1549 aa13.14□□□□□ -0.31
Nefm-201ENSMUST00000022638 Eid3Q3V124 375 aa13.14□□□□□ -0.31
Nefm-201ENSMUST00000022638 ClspnQ80YR7 1315 aa13.13□□□□□ -0.31
Nefm-201ENSMUST00000022638 Top2aQ01320 1528 aaKnown RBP13.11□□□□□ -0.31
Nefm-201ENSMUST00000022638 SafbD3YXK2 937 aaKnown RBP13.1□□□□□ -0.31
Nefm-201ENSMUST00000022638 Slc24a1Q91WD8 1130 aa13.08□□□□□ -0.31
Nefm-201ENSMUST00000022638 Aplp2Q06335 707 aa13.02□□□□□ -0.32
Nefm-201ENSMUST00000022638 Phldb1Q6PDH0 1371 aaKnown RBP13.02□□□□□ -0.33
Nefm-201ENSMUST00000022638 Cux2P70298 1426 aa12.99□□□□□ -0.33
Nefm-201ENSMUST00000022638 Fam71e1A1L3C1 212 aa12.98□□□□□ -0.33
Nefm-201ENSMUST00000022638 Wdr62Q3U3T8 1523 aa12.98□□□□□ -0.33
Nefm-201ENSMUST00000022638 Hnrnpul2Q00PI9 745 aaKnown RBP12.97□□□□□ -0.33
Nefm-201ENSMUST00000022638 PtprkP35822 1457 aa12.93□□□□□ -0.34
Nefm-201ENSMUST00000022638 Ube2uB1AUC4 352 aa12.93□□□□□ -0.34
Nefm-201ENSMUST00000022638 Fam50aQ9WV03 339 aaKnown RBP12.92□□□□□ -0.34
Nefm-201ENSMUST00000022638 Setd5Q5XJV7 1441 aa12.91□□□□□ -0.34
Nefm-201ENSMUST00000022638 Ttbk1Q6PCN3 1308 aa12.91□□□□□ -0.34
Nefm-201ENSMUST00000022638 DiexfQ8BTT6 772 aaKnown RBP12.9□□□□□ -0.34
Nefm-201ENSMUST00000022638 Eea1Q8BL66 1411 aa12.9□□□□□ -0.34
Nefm-201ENSMUST00000022638 Arhgap35Q91YM2 1499 aa12.89□□□□□ -0.35
Nefm-201ENSMUST00000022638 Lmod2Q3UHZ5 550 aa12.88□□□□□ -0.35
Nefm-201ENSMUST00000022638 NclP09405 707 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms